RNA–Protein interactions for RNA: ENST00000557017.1

TRIP11-205, Transcript of thyroid hormone receptor interactor 11, humanhuman

TSL 5

Gene TRIP11, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP11-205ENST00000557017 AEBP2Q6ZN18 517 aaPredicted RBP35.78■■■■□ 3.32
TRIP11-205ENST00000557017 CHIC1Q5VXU3 224 aa33.73■■■□□ 2.99
TRIP11-205ENST00000557017 SENP3Q9H4L4 574 aaPredicted RBP30.43■■■□□ 2.46
TRIP11-205ENST00000557017 PHF23Q9BUL5 403 aaPredicted RBP30.07■■■□□ 2.4
TRIP11-205ENST00000557017 FOXD1Q16676 465 aa28.46■■■□□ 2.15
TRIP11-205ENST00000557017 PLPPR3Q6T4P5 718 aa26.83■■□□□ 1.89
TRIP11-205ENST00000557017 MSH5O43196 834 aa26.61■■□□□ 1.85
TRIP11-205ENST00000557017 PPP6R1Q9UPN7 881 aa26.53■■□□□ 1.84
TRIP11-205ENST00000557017 PIAS4Q8N2W9 510 aaPredicted RBP26.51■■□□□ 1.83
TRIP11-205ENST00000557017 ADRA2BP18089 450 aa26.41■■□□□ 1.82
TRIP11-205ENST00000557017 POTEDQ86YR6 584 aa26.36■■□□□ 1.81
TRIP11-205ENST00000557017 MAPK8IP2Q13387 824 aaPredicted RBP24.33■■□□□ 1.49
TRIP11-205ENST00000557017 DMRT2Q9Y5R5 561 aa24.13■■□□□ 1.45
TRIP11-205ENST00000557017 SCAF1Q9H7N4 1312 aaKnown RBP24.03■■□□□ 1.44
TRIP11-205ENST00000557017 PPP4R3CPQ6ZMV5 832 aa23.53■■□□□ 1.36
TRIP11-205ENST00000557017 HOXD11P31277 338 aaPredicted RBP23.17■■□□□ 1.3
TRIP11-205ENST00000557017 DCAF8L1A6NGE4 600 aa23.15■■□□□ 1.3
TRIP11-205ENST00000557017 CNKSR2Q8WXI2 1034 aa23.09■■□□□ 1.29
TRIP11-205ENST00000557017 CACNB1Q02641 598 aaPredicted RBP22.98■■□□□ 1.27
TRIP11-205ENST00000557017 RNF216Q9NWF9 866 aaPredicted RBP22.93■■□□□ 1.26
TRIP11-205ENST00000557017 RNF39Q9H2S5 420 aa22.76■■□□□ 1.23
TRIP11-205ENST00000557017 NCBP3Q53F19 620 aaKnown RBP22.49■■□□□ 1.19
TRIP11-205ENST00000557017 C1QBPQ07021 282 aaKnown RBP22.36■■□□□ 1.17
TRIP11-205ENST00000557017 DNAJC5BQ9UF47 199 aa22.35■■□□□ 1.17
TRIP11-205ENST00000557017 NPM3O75607 178 aaKnown RBP22.27■■□□□ 1.16
TRIP11-205ENST00000557017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.07■■□□□ 1.12
TRIP11-205ENST00000557017 KCNA4P22459 653 aa21.71■■□□□ 1.07
TRIP11-205ENST00000557017 U3KPZ7 1027 aaPredicted RBP21.62■■□□□ 1.05
TRIP11-205ENST00000557017 SPINK5Q9NQ38 1064 aaPredicted RBP21.4■■□□□ 1.02
TRIP11-205ENST00000557017 SLC4A2P04920 1241 aa21.34■■□□□ 1.01
TRIP11-205ENST00000557017 CAPN15O75808 1086 aa21.3■■□□□ 1
TRIP11-205ENST00000557017 DSG3P32926 999 aa21.25■□□□□ 0.99
TRIP11-205ENST00000557017 TRHP20396 242 aaPredicted RBP20.93■□□□□ 0.94
TRIP11-205ENST00000557017 APLP2Q06481 763 aa20.85■□□□□ 0.93
TRIP11-205ENST00000557017 ABCB7O75027 752 aa20.84■□□□□ 0.93
TRIP11-205ENST00000557017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.83■□□□□ 0.93
TRIP11-205ENST00000557017 HNRNPUL2Q1KMD3 747 aaKnown RBP20.83■□□□□ 0.93
TRIP11-205ENST00000557017 ZNF219Q9P2Y4 722 aaPredicted RBP20.83■□□□□ 0.93
TRIP11-205ENST00000557017 SAMD1Q6SPF0 538 aaPredicted RBP20.74■□□□□ 0.91
TRIP11-205ENST00000557017 POTEHQ6S545 545 aa20.6■□□□□ 0.89
TRIP11-205ENST00000557017 MYCNP04198 464 aaPredicted RBP20.54■□□□□ 0.88
TRIP11-205ENST00000557017 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
TRIP11-205ENST00000557017 POLA2Q14181 598 aa20.34■□□□□ 0.85
TRIP11-205ENST00000557017 FOXD4L1Q9NU39 408 aa20.25■□□□□ 0.83
TRIP11-205ENST00000557017 ATF5Q9Y2D1 282 aaPredicted RBP20.2■□□□□ 0.82
TRIP11-205ENST00000557017 RBM42Q9BTD8 480 aaKnown RBP20.18■□□□□ 0.82
TRIP11-205ENST00000557017 ZBTB22O15209 634 aa20■□□□□ 0.79
TRIP11-205ENST00000557017 CHRDL2Q6WN34 429 aa19.89■□□□□ 0.77
TRIP11-205ENST00000557017 ZBTB12Q9Y330 459 aaPredicted RBP19.82■□□□□ 0.76
TRIP11-205ENST00000557017 AKT1S1Q96B36 256 aa19.73■□□□□ 0.75
TRIP11-205ENST00000557017 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
TRIP11-205ENST00000557017 ATXN8OSP0DMR3 200 aa19.61■□□□□ 0.73
TRIP11-205ENST00000557017 REM2Q8IYK8 340 aaPredicted RBP19.59■□□□□ 0.73
TRIP11-205ENST00000557017 PIP4P2Q8N4L2 257 aa19.4■□□□□ 0.7
TRIP11-205ENST00000557017 PITPNM1O00562 1244 aa19.39■□□□□ 0.69
TRIP11-205ENST00000557017 FBLN2P98095 1184 aa19.28■□□□□ 0.68
TRIP11-205ENST00000557017 SPDYE2BA6NHP3 402 aa19.24■□□□□ 0.67
TRIP11-205ENST00000557017 SPDYE6P0CI01 402 aa19.24■□□□□ 0.67
TRIP11-205ENST00000557017 FXR2P51116 673 aaKnown RBP eCLIP19.24■□□□□ 0.67
TRIP11-205ENST00000557017 MKRN4PQ13434 485 aaPredicted RBP19.24■□□□□ 0.67
TRIP11-205ENST00000557017 SPDYE2Q495Y8 402 aa19.24■□□□□ 0.67
TRIP11-205ENST00000557017 SP7Q8TDD2 431 aaPredicted RBP19.22■□□□□ 0.67
TRIP11-205ENST00000557017 HAX1O00165 279 aa19.07■□□□□ 0.64
TRIP11-205ENST00000557017 ZNF692Q9BU19 519 aaPredicted RBP19.01■□□□□ 0.63
TRIP11-205ENST00000557017 SSUH2Q9Y2M2 353 aa19■□□□□ 0.63
TRIP11-205ENST00000557017 CLEC11AQ9Y240 323 aa18.95■□□□□ 0.62
TRIP11-205ENST00000557017 SPDYE1Q8NFV5 336 aaPredicted RBP18.94■□□□□ 0.62
TRIP11-205ENST00000557017 EVX2Q03828 476 aa18.92■□□□□ 0.62
TRIP11-205ENST00000557017 PRKAR2AP13861 404 aaKnown RBP18.87■□□□□ 0.61
TRIP11-205ENST00000557017 CSRNP3Q8WYN3 585 aa18.87■□□□□ 0.61
TRIP11-205ENST00000557017 PABPN1Q86U42 306 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRIP11-205ENST00000557017 CHADLQ6NUI6 762 aa18.66■□□□□ 0.58
TRIP11-205ENST00000557017 C19orf67A6NJJ6 358 aa18.63■□□□□ 0.57
TRIP11-205ENST00000557017 PRR29P0C7W0 189 aa18.6■□□□□ 0.57
TRIP11-205ENST00000557017 EHMT2Q96KQ7 1210 aa18.53■□□□□ 0.56
TRIP11-205ENST00000557017 GABBR2O75899 941 aa18.41■□□□□ 0.54
TRIP11-205ENST00000557017 FARP1Q9Y4F1 1045 aaPredicted RBP18.33■□□□□ 0.52
TRIP11-205ENST00000557017 CD44P16070 742 aaKnown RBP18.25■□□□□ 0.51
TRIP11-205ENST00000557017 SPDYE4A6NLX3 237 aa18.18■□□□□ 0.5
TRIP11-205ENST00000557017 CREBZFQ9NS37 354 aa18.14■□□□□ 0.49
TRIP11-205ENST00000557017 STAG3Q9UJ98 1225 aa18.11■□□□□ 0.49
TRIP11-205ENST00000557017 POTEIP0CG38 1075 aa18.07■□□□□ 0.48
TRIP11-205ENST00000557017 LHX8Q68G74 356 aa18.03■□□□□ 0.48
TRIP11-205ENST00000557017 ZRANB1Q9UGI0 708 aa17.97■□□□□ 0.47
TRIP11-205ENST00000557017 ZNF579Q8NAF0 562 aaKnown RBP17.96■□□□□ 0.47
TRIP11-205ENST00000557017 CLCN6P51797 869 aa17.94■□□□□ 0.46
TRIP11-205ENST00000557017 MNX1P50219 401 aaPredicted RBP17.83■□□□□ 0.44
TRIP11-205ENST00000557017 DCBLD2Q96PD2 775 aa17.83■□□□□ 0.44
TRIP11-205ENST00000557017 GALR2O43603 387 aaPredicted RBP17.79■□□□□ 0.44
TRIP11-205ENST00000557017 PHF12Q96QT6 1004 aa17.74■□□□□ 0.43
TRIP11-205ENST00000557017 PROM2Q8N271 834 aa17.73■□□□□ 0.43
TRIP11-205ENST00000557017 NPM1P06748 294 aaKnown RBP eCLIP17.72■□□□□ 0.43
TRIP11-205ENST00000557017 PAK3O75914 559 aaPredicted RBP17.71■□□□□ 0.43
TRIP11-205ENST00000557017 PELP1Q8IZL8 1130 aaKnown RBP17.5■□□□□ 0.39
TRIP11-205ENST00000557017 POTEB2H3BUK9 544 aa17.49■□□□□ 0.39
TRIP11-205ENST00000557017 MS4A3Q96HJ5 214 aa17.49■□□□□ 0.39
TRIP11-205ENST00000557017 TSPYL2Q9H2G4 693 aaPredicted RBP17.47■□□□□ 0.39
TRIP11-205ENST00000557017 OTUD5Q96G74 571 aa17.42■□□□□ 0.38
TRIP11-205ENST00000557017 CCDC61Q9Y6R9 512 aa17.4■□□□□ 0.38
TRIP11-205ENST00000557017 ASTLQ6HA08 431 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms