RNA–Protein interactions for RNA: ENST00000556721.1

CALM1-212, Transcript of calmodulin 1, humanhuman

TSL 2

Gene CALM1, Length 444 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-212ENST00000556721 AEBP2Q6ZN18 517 aaPredicted RBP18.02■□□□□ 0.48
CALM1-212ENST00000556721 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
CALM1-212ENST00000556721 PHF23Q9BUL5 403 aaPredicted RBP15.63■□□□□ 0.09
CALM1-212ENST00000556721 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
CALM1-212ENST00000556721 PLPPR3Q6T4P5 718 aa14.57□□□□□ -0.08
CALM1-212ENST00000556721 FOXD1Q16676 465 aa14.22□□□□□ -0.13
CALM1-212ENST00000556721 ADRA2BP18089 450 aa13.79□□□□□ -0.2
CALM1-212ENST00000556721 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
CALM1-212ENST00000556721 PIAS4Q8N2W9 510 aaPredicted RBP13.44□□□□□ -0.26
CALM1-212ENST00000556721 MSH5O43196 834 aa13.19□□□□□ -0.3
CALM1-212ENST00000556721 PPP4R3CPQ6ZMV5 832 aa12.86□□□□□ -0.35
CALM1-212ENST00000556721 KCNA4P22459 653 aa12.81□□□□□ -0.36
CALM1-212ENST00000556721 SCAF1Q9H7N4 1312 aaKnown RBP12.65□□□□□ -0.38
CALM1-212ENST00000556721 NCBP3Q53F19 620 aaKnown RBP12.64□□□□□ -0.39
CALM1-212ENST00000556721 CNKSR2Q8WXI2 1034 aa12.45□□□□□ -0.42
CALM1-212ENST00000556721 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
CALM1-212ENST00000556721 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
CALM1-212ENST00000556721 SLC4A1APQ9BWU0 796 aaKnown RBP12.28□□□□□ -0.44
CALM1-212ENST00000556721 DMRT2Q9Y5R5 561 aa12.24□□□□□ -0.45
CALM1-212ENST00000556721 EHMT2Q96KQ7 1210 aa12.22□□□□□ -0.45
CALM1-212ENST00000556721 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
CALM1-212ENST00000556721 POTEDQ86YR6 584 aa12.03□□□□□ -0.48
CALM1-212ENST00000556721 HOXD11P31277 338 aaPredicted RBP12□□□□□ -0.49
CALM1-212ENST00000556721 DNAJC5BQ9UF47 199 aa11.9□□□□□ -0.5
CALM1-212ENST00000556721 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
CALM1-212ENST00000556721 DCAF8L1A6NGE4 600 aa11.79□□□□□ -0.52
CALM1-212ENST00000556721 ZBTB22O15209 634 aa11.75□□□□□ -0.53
CALM1-212ENST00000556721 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
CALM1-212ENST00000556721 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
CALM1-212ENST00000556721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.55□□□□□ -0.561e-8■■■□□ 19
CALM1-212ENST00000556721 MYCNP04198 464 aaPredicted RBP11.47□□□□□ -0.57
CALM1-212ENST00000556721 U3KPZ7 1027 aaPredicted RBP11.31□□□□□ -0.6
CALM1-212ENST00000556721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.3□□□□□ -0.6
CALM1-212ENST00000556721 HNRNPUL2Q1KMD3 747 aaKnown RBP11.3□□□□□ -0.6
CALM1-212ENST00000556721 ATXN8OSP0DMR3 200 aa11.28□□□□□ -0.6
CALM1-212ENST00000556721 SAMD1Q6SPF0 538 aaPredicted RBP11.26□□□□□ -0.61
CALM1-212ENST00000556721 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
CALM1-212ENST00000556721 C1QBPQ07021 282 aaKnown RBP11.16□□□□□ -0.62
CALM1-212ENST00000556721 APLP2Q06481 763 aa11.15□□□□□ -0.62
CALM1-212ENST00000556721 ATF5Q9Y2D1 282 aaPredicted RBP11.11□□□□□ -0.63
CALM1-212ENST00000556721 CACNB1Q02641 598 aaPredicted RBP11.03□□□□□ -0.64
CALM1-212ENST00000556721 CAPN15O75808 1086 aa10.96□□□□□ -0.65
CALM1-212ENST00000556721 TRHP20396 242 aaPredicted RBP10.96□□□□□ -0.65
CALM1-212ENST00000556721 ZNF219Q9P2Y4 722 aaPredicted RBP10.96□□□□□ -0.65
CALM1-212ENST00000556721 SPINK5Q9NQ38 1064 aaPredicted RBP10.95□□□□□ -0.66
CALM1-212ENST00000556721 POLA2Q14181 598 aa10.79□□□□□ -0.68
CALM1-212ENST00000556721 FKBP8Q14318 412 aa10.79□□□□□ -0.68
CALM1-212ENST00000556721 ABCB7O75027 752 aa10.75□□□□□ -0.69
CALM1-212ENST00000556721 FBLN2P98095 1184 aa10.72□□□□□ -0.69
CALM1-212ENST00000556721 DSG3P32926 999 aa10.7□□□□□ -0.7
CALM1-212ENST00000556721 ZBTB12Q9Y330 459 aaPredicted RBP10.65□□□□□ -0.7
CALM1-212ENST00000556721 MKRN4PQ13434 485 aaPredicted RBP10.63□□□□□ -0.71
CALM1-212ENST00000556721 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
CALM1-212ENST00000556721 OSCARQ8IYS5 282 aa10.42□□□□□ -0.74
CALM1-212ENST00000556721 ZNF692Q9BU19 519 aaPredicted RBP10.38□□□□□ -0.75
CALM1-212ENST00000556721 FBXO3Q9UK99 471 aa10.36□□□□□ -0.75
CALM1-212ENST00000556721 SPDYE2BA6NHP3 402 aa10.34□□□□□ -0.75
CALM1-212ENST00000556721 SPDYE6P0CI01 402 aa10.34□□□□□ -0.75
CALM1-212ENST00000556721 SPDYE2Q495Y8 402 aa10.34□□□□□ -0.75
CALM1-212ENST00000556721 PROM2Q8N271 834 aa10.31□□□□□ -0.76
CALM1-212ENST00000556721 RBM42Q9BTD8 480 aaKnown RBP10.25□□□□□ -0.77
CALM1-212ENST00000556721 SSUH2Q9Y2M2 353 aa10.25□□□□□ -0.77
CALM1-212ENST00000556721 PABPN1Q86U42 306 aaKnown RBP eCLIP10.24□□□□□ -0.77
CALM1-212ENST00000556721 AMER1Q5JTC6 1135 aaPredicted RBP10.21□□□□□ -0.77
CALM1-212ENST00000556721 VASPP50552 380 aaPredicted RBP10.18□□□□□ -0.78
CALM1-212ENST00000556721 RTN4Q9NQC3 1192 aaKnown RBP10.17□□□□□ -0.78
CALM1-212ENST00000556721 STAG3Q9UJ98 1225 aa10.12□□□□□ -0.79
CALM1-212ENST00000556721 AKT1S1Q96B36 256 aa10.1□□□□□ -0.79
CALM1-212ENST00000556721 PLCD3Q8N3E9 789 aa10.05□□□□□ -0.8
CALM1-212ENST00000556721 KLHL34Q8N239 644 aa10.04□□□□□ -0.8
CALM1-212ENST00000556721 IFNLR1Q8IU57 520 aaPredicted RBP10.03□□□□□ -0.8
CALM1-212ENST00000556721 MIER1Q8N108 512 aa10.03□□□□□ -0.8
CALM1-212ENST00000556721 SPDYE1Q8NFV5 336 aaPredicted RBP10.02□□□□□ -0.81
CALM1-212ENST00000556721 CLEC11AQ9Y240 323 aa10□□□□□ -0.81
CALM1-212ENST00000556721 PLEKHG5O94827 1062 aa9.99□□□□□ -0.81
CALM1-212ENST00000556721 REM2Q8IYK8 340 aaPredicted RBP9.99□□□□□ -0.81
CALM1-212ENST00000556721 PRR29P0C7W0 189 aa9.92□□□□□ -0.82
CALM1-212ENST00000556721 SPOCK2Q92563 424 aa9.92□□□□□ -0.82
CALM1-212ENST00000556721 ZBTB47Q9UFB7 747 aaPredicted RBP9.9□□□□□ -0.82
CALM1-212ENST00000556721 PITPNM1O00562 1244 aa9.87□□□□□ -0.83
CALM1-212ENST00000556721 CHRDL2Q6WN34 429 aa9.81□□□□□ -0.84
CALM1-212ENST00000556721 DCAF8L2P0C7V8 631 aa9.79□□□□□ -0.84
CALM1-212ENST00000556721 CREBZFQ9NS37 354 aa9.78□□□□□ -0.84
CALM1-212ENST00000556721 CIZ1Q9ULV3 898 aaPredicted RBP9.78□□□□□ -0.84
CALM1-212ENST00000556721 PKD2Q13563 968 aa9.77□□□□□ -0.85
CALM1-212ENST00000556721 ECM2O94769 699 aaPredicted RBP9.74□□□□□ -0.85
CALM1-212ENST00000556721 NPM1P06748 294 aaKnown RBP eCLIP9.69□□□□□ -0.86
CALM1-212ENST00000556721 CHADLQ6NUI6 762 aa9.69□□□□□ -0.86
CALM1-212ENST00000556721 FXR2P51116 673 aaKnown RBP eCLIP9.68□□□□□ -0.86
CALM1-212ENST00000556721 DCAF8Q5TAQ9 597 aa9.68□□□□□ -0.86
CALM1-212ENST00000556721 MNX1P50219 401 aaPredicted RBP9.67□□□□□ -0.86
CALM1-212ENST00000556721 NUBP1P53384 320 aa9.67□□□□□ -0.86
CALM1-212ENST00000556721 GSE1Q14687 1217 aa9.67□□□□□ -0.86
CALM1-212ENST00000556721 PIP4P2Q8N4L2 257 aa9.67□□□□□ -0.86
CALM1-212ENST00000556721 FAM212AQ96EL1 285 aa9.66□□□□□ -0.86
CALM1-212ENST00000556721 PRKAR2AP13861 404 aaKnown RBP9.65□□□□□ -0.86
CALM1-212ENST00000556721 TRIM41Q8WV44 630 aa9.63□□□□□ -0.87
CALM1-212ENST00000556721 FARP1Q9Y4F1 1045 aaPredicted RBP9.61□□□□□ -0.87
CALM1-212ENST00000556721 RGL2O15211 777 aa9.6□□□□□ -0.87
CALM1-212ENST00000556721 RASEFQ8IZ41 740 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms