RNA–Protein interactions for RNA: ENST00000556686.1

NID2-206, Transcript of nidogen 2, humanhuman

TSL 5

Gene NID2, Length 1,320 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID2-206ENST00000556686 AEBP2Q6ZN18 517 aaPredicted RBP22.28■■□□□ 1.16
NID2-206ENST00000556686 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
NID2-206ENST00000556686 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
NID2-206ENST00000556686 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
NID2-206ENST00000556686 FOXD1Q16676 465 aa17.65■□□□□ 0.42
NID2-206ENST00000556686 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
NID2-206ENST00000556686 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
NID2-206ENST00000556686 ADRA2BP18089 450 aa16.61■□□□□ 0.25
NID2-206ENST00000556686 PIAS4Q8N2W9 510 aaPredicted RBP16.52■□□□□ 0.24
NID2-206ENST00000556686 MSH5O43196 834 aa16.45■□□□□ 0.22
NID2-206ENST00000556686 POTEDQ86YR6 584 aa15.62■□□□□ 0.09
NID2-206ENST00000556686 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.03
NID2-206ENST00000556686 MAPK8IP2Q13387 824 aaPredicted RBP15.17■□□□□ 0.02
NID2-206ENST00000556686 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
NID2-206ENST00000556686 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
NID2-206ENST00000556686 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
NID2-206ENST00000556686 HOXD11P31277 338 aaPredicted RBP14.68□□□□□ -0.06
NID2-206ENST00000556686 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
NID2-206ENST00000556686 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
NID2-206ENST00000556686 NPM3O75607 178 aaKnown RBP14.4□□□□□ -0.1
NID2-206ENST00000556686 DCAF8L1A6NGE4 600 aa14.34□□□□□ -0.11
NID2-206ENST00000556686 KCNA4P22459 653 aa14.3□□□□□ -0.12
NID2-206ENST00000556686 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
NID2-206ENST00000556686 RNF39Q9H2S5 420 aa14.07□□□□□ -0.16
NID2-206ENST00000556686 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
NID2-206ENST00000556686 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.19
NID2-206ENST00000556686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.19
NID2-206ENST00000556686 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
NID2-206ENST00000556686 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
NID2-206ENST00000556686 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
NID2-206ENST00000556686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
NID2-206ENST00000556686 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
NID2-206ENST00000556686 SPINK5Q9NQ38 1064 aaPredicted RBP13.36□□□□□ -0.27
NID2-206ENST00000556686 APLP2Q06481 763 aa13.35□□□□□ -0.27
NID2-206ENST00000556686 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.28
NID2-206ENST00000556686 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
NID2-206ENST00000556686 CAPN15O75808 1086 aa13.3□□□□□ -0.28
NID2-206ENST00000556686 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
NID2-206ENST00000556686 DSG3P32926 999 aa13.24□□□□□ -0.29
NID2-206ENST00000556686 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
NID2-206ENST00000556686 ZBTB22O15209 634 aa13.16□□□□□ -0.3
NID2-206ENST00000556686 TRHP20396 242 aaPredicted RBP13.13□□□□□ -0.31
NID2-206ENST00000556686 ABCB7O75027 752 aa12.99□□□□□ -0.33
NID2-206ENST00000556686 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
NID2-206ENST00000556686 ATXN8OSP0DMR3 200 aa12.94□□□□□ -0.34
NID2-206ENST00000556686 POLA2Q14181 598 aa12.88□□□□□ -0.35
NID2-206ENST00000556686 CSRNP3Q8WYN3 585 aa12.79□□□□□ -0.36
NID2-206ENST00000556686 ZBTB12Q9Y330 459 aaPredicted RBP12.7□□□□□ -0.38
NID2-206ENST00000556686 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
NID2-206ENST00000556686 RBM42Q9BTD8 480 aaKnown RBP12.63□□□□□ -0.39
NID2-206ENST00000556686 FBLN2P98095 1184 aa12.44□□□□□ -0.42
NID2-206ENST00000556686 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
NID2-206ENST00000556686 AKT1S1Q96B36 256 aa12.4□□□□□ -0.42
NID2-206ENST00000556686 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
NID2-206ENST00000556686 SPDYE2BA6NHP3 402 aa12.32□□□□□ -0.44
NID2-206ENST00000556686 SPDYE6P0CI01 402 aa12.32□□□□□ -0.44
NID2-206ENST00000556686 SPDYE2Q495Y8 402 aa12.32□□□□□ -0.44
NID2-206ENST00000556686 POTEHQ6S545 545 aa12.28□□□□□ -0.44
NID2-206ENST00000556686 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
NID2-206ENST00000556686 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
NID2-206ENST00000556686 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
NID2-206ENST00000556686 ZNF692Q9BU19 519 aaPredicted RBP12.16□□□□□ -0.46
NID2-206ENST00000556686 PITPNM1O00562 1244 aa12.11□□□□□ -0.47
NID2-206ENST00000556686 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
NID2-206ENST00000556686 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
NID2-206ENST00000556686 PIP4P2Q8N4L2 257 aa12□□□□□ -0.49
NID2-206ENST00000556686 PABPN1Q86U42 306 aaKnown RBP eCLIP11.98□□□□□ -0.49
NID2-206ENST00000556686 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
NID2-206ENST00000556686 CLEC11AQ9Y240 323 aa11.91□□□□□ -0.5
NID2-206ENST00000556686 PRR29P0C7W0 189 aa11.8□□□□□ -0.52
NID2-206ENST00000556686 PRKAR2AP13861 404 aaKnown RBP11.79□□□□□ -0.52
NID2-206ENST00000556686 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
NID2-206ENST00000556686 PROM2Q8N271 834 aa11.76□□□□□ -0.53
NID2-206ENST00000556686 HAX1O00165 279 aa11.67□□□□□ -0.54
NID2-206ENST00000556686 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
NID2-206ENST00000556686 SP7Q8TDD2 431 aaPredicted RBP11.63□□□□□ -0.55
NID2-206ENST00000556686 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
NID2-206ENST00000556686 CREBZFQ9NS37 354 aa11.59□□□□□ -0.55
NID2-206ENST00000556686 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
NID2-206ENST00000556686 EVX2Q03828 476 aa11.57□□□□□ -0.56
NID2-206ENST00000556686 FKBP8Q14318 412 aa11.53□□□□□ -0.56
NID2-206ENST00000556686 MNX1P50219 401 aaPredicted RBP11.45□□□□□ -0.58
NID2-206ENST00000556686 CD44P16070 742 aaKnown RBP11.42□□□□□ -0.58
NID2-206ENST00000556686 NPM1P06748 294 aaKnown RBP eCLIP11.39□□□□□ -0.59
NID2-206ENST00000556686 CLCN6P51797 869 aa11.35□□□□□ -0.59
NID2-206ENST00000556686 GABBR2O75899 941 aa11.35□□□□□ -0.59
NID2-206ENST00000556686 MIER1Q8N108 512 aa11.32□□□□□ -0.6
NID2-206ENST00000556686 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
NID2-206ENST00000556686 PLEKHG5O94827 1062 aa11.31□□□□□ -0.6
NID2-206ENST00000556686 FBXO3Q9UK99 471 aa11.3□□□□□ -0.6
NID2-206ENST00000556686 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
NID2-206ENST00000556686 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.61
NID2-206ENST00000556686 PLCD3Q8N3E9 789 aa11.24□□□□□ -0.61
NID2-206ENST00000556686 ZBTB47Q9UFB7 747 aaPredicted RBP11.22□□□□□ -0.61
NID2-206ENST00000556686 PHF12Q96QT6 1004 aa11.14□□□□□ -0.63
NID2-206ENST00000556686 CCDC61Q9Y6R9 512 aa11.13□□□□□ -0.63
NID2-206ENST00000556686 VASPP50552 380 aaPredicted RBP11.12□□□□□ -0.63
NID2-206ENST00000556686 NUBP1P53384 320 aa11.12□□□□□ -0.63
NID2-206ENST00000556686 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
NID2-206ENST00000556686 TSPYL2Q9H2G4 693 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms