RNA–Protein interactions for RNA: ENST00000556547.5

CASC1-212, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 820 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-212ENST00000556547 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
CASC1-212ENST00000556547 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
CASC1-212ENST00000556547 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
CASC1-212ENST00000556547 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
CASC1-212ENST00000556547 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
CASC1-212ENST00000556547 FOXD1Q16676 465 aa15.5■□□□□ 0.07
CASC1-212ENST00000556547 ADRA2BP18089 450 aa15.26■□□□□ 0.03
CASC1-212ENST00000556547 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
CASC1-212ENST00000556547 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
CASC1-212ENST00000556547 KCNA4P22459 653 aa14.62□□□□□ -0.07
CASC1-212ENST00000556547 PPP4R3CPQ6ZMV5 832 aa14.48□□□□□ -0.09
CASC1-212ENST00000556547 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
CASC1-212ENST00000556547 MSH5O43196 834 aa14.27□□□□□ -0.13
CASC1-212ENST00000556547 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
CASC1-212ENST00000556547 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
CASC1-212ENST00000556547 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
CASC1-212ENST00000556547 SLC4A1APQ9BWU0 796 aaKnown RBP14.08□□□□□ -0.16
CASC1-212ENST00000556547 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
CASC1-212ENST00000556547 NPM3O75607 178 aaKnown RBP14.01□□□□□ -0.17
CASC1-212ENST00000556547 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
CASC1-212ENST00000556547 DNAJC5BQ9UF47 199 aa13.67□□□□□ -0.22
CASC1-212ENST00000556547 MAPK8IP2Q13387 824 aaPredicted RBP13.66□□□□□ -0.22
CASC1-212ENST00000556547 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
CASC1-212ENST00000556547 DMRT2Q9Y5R5 561 aa13.53□□□□□ -0.24
CASC1-212ENST00000556547 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
CASC1-212ENST00000556547 ZBTB22O15209 634 aa13.42□□□□□ -0.26
CASC1-212ENST00000556547 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
CASC1-212ENST00000556547 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
CASC1-212ENST00000556547 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
CASC1-212ENST00000556547 ATXN8OSP0DMR3 200 aa12.98□□□□□ -0.33
CASC1-212ENST00000556547 DCAF8L1A6NGE4 600 aa12.89□□□□□ -0.35
CASC1-212ENST00000556547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
CASC1-212ENST00000556547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.79□□□□□ -0.36
CASC1-212ENST00000556547 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
CASC1-212ENST00000556547 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
CASC1-212ENST00000556547 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
CASC1-212ENST00000556547 APLP2Q06481 763 aa12.59□□□□□ -0.39
CASC1-212ENST00000556547 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
CASC1-212ENST00000556547 FKBP8Q14318 412 aa12.45□□□□□ -0.42
CASC1-212ENST00000556547 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
CASC1-212ENST00000556547 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
CASC1-212ENST00000556547 RNF39Q9H2S5 420 aa12.19□□□□□ -0.46
CASC1-212ENST00000556547 CACNB1Q02641 598 aaPredicted RBP12.17□□□□□ -0.46
CASC1-212ENST00000556547 C1QBPQ07021 282 aaKnown RBP12.14□□□□□ -0.47
CASC1-212ENST00000556547 FBLN2P98095 1184 aa12.12□□□□□ -0.47
CASC1-212ENST00000556547 TRHP20396 242 aaPredicted RBP12.11□□□□□ -0.47
CASC1-212ENST00000556547 RTN4Q9NQC3 1192 aaKnown RBP12.11□□□□□ -0.47
CASC1-212ENST00000556547 CAPN15O75808 1086 aa12.07□□□□□ -0.48
CASC1-212ENST00000556547 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
CASC1-212ENST00000556547 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
CASC1-212ENST00000556547 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
CASC1-212ENST00000556547 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
CASC1-212ENST00000556547 POLA2Q14181 598 aa12.01□□□□□ -0.49
CASC1-212ENST00000556547 MKRN4PQ13434 485 aaPredicted RBP11.98□□□□□ -0.49
CASC1-212ENST00000556547 PROM2Q8N271 834 aa11.91□□□□□ -0.5
CASC1-212ENST00000556547 ABCB7O75027 752 aa11.82□□□□□ -0.52
CASC1-212ENST00000556547 SLC24A1O60721 1099 aa11.8□□□□□ -0.52
CASC1-212ENST00000556547 VASPP50552 380 aaPredicted RBP11.75□□□□□ -0.53
CASC1-212ENST00000556547 DSG3P32926 999 aa11.74□□□□□ -0.53
CASC1-212ENST00000556547 SPDYE2BA6NHP3 402 aa11.67□□□□□ -0.54
CASC1-212ENST00000556547 SPDYE6P0CI01 402 aa11.67□□□□□ -0.54
CASC1-212ENST00000556547 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
CASC1-212ENST00000556547 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
CASC1-212ENST00000556547 OSCARQ8IYS5 282 aa11.59□□□□□ -0.55
CASC1-212ENST00000556547 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
CASC1-212ENST00000556547 SSUH2Q9Y2M2 353 aa11.58□□□□□ -0.56
CASC1-212ENST00000556547 IFNLR1Q8IU57 520 aaPredicted RBP11.55□□□□□ -0.56
CASC1-212ENST00000556547 PABPN1Q86U42 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
CASC1-212ENST00000556547 KLHL34Q8N239 644 aa11.44□□□□□ -0.58
CASC1-212ENST00000556547 SPOCK2Q92563 424 aa11.44□□□□□ -0.58
CASC1-212ENST00000556547 PLCD3Q8N3E9 789 aa11.43□□□□□ -0.58
CASC1-212ENST00000556547 PLEKHG5O94827 1062 aa11.41□□□□□ -0.58
CASC1-212ENST00000556547 ZBTB47Q9UFB7 747 aaPredicted RBP11.38□□□□□ -0.59
CASC1-212ENST00000556547 PKD2Q13563 968 aa11.35□□□□□ -0.59
CASC1-212ENST00000556547 MIER1Q8N108 512 aa11.35□□□□□ -0.59
CASC1-212ENST00000556547 DCAF8L2P0C7V8 631 aa11.34□□□□□ -0.59
CASC1-212ENST00000556547 RBM42Q9BTD8 480 aaKnown RBP11.32□□□□□ -0.6
CASC1-212ENST00000556547 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
CASC1-212ENST00000556547 ECM2O94769 699 aaPredicted RBP11.26□□□□□ -0.61
CASC1-212ENST00000556547 SPDYE1Q8NFV5 336 aaPredicted RBP11.22□□□□□ -0.61
CASC1-212ENST00000556547 AKT1S1Q96B36 256 aa11.22□□□□□ -0.61
CASC1-212ENST00000556547 TRIM41Q8WV44 630 aa11.2□□□□□ -0.62
CASC1-212ENST00000556547 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.15□□□□□ -0.62
CASC1-212ENST00000556547 CIZ1Q9ULV3 898 aaPredicted RBP11.14□□□□□ -0.63
CASC1-212ENST00000556547 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
CASC1-212ENST00000556547 GSE1Q14687 1217 aa11.1□□□□□ -0.63
CASC1-212ENST00000556547 HAP1P54257 671 aaPredicted RBP11.09□□□□□ -0.63
CASC1-212ENST00000556547 RGL2O15211 777 aa11.07□□□□□ -0.64
CASC1-212ENST00000556547 PRR29P0C7W0 189 aa11.06□□□□□ -0.64
CASC1-212ENST00000556547 CLEC11AQ9Y240 323 aa11.06□□□□□ -0.64
CASC1-212ENST00000556547 REM2Q8IYK8 340 aaPredicted RBP11.04□□□□□ -0.64
CASC1-212ENST00000556547 POTEHQ6S545 545 aa11.03□□□□□ -0.64
CASC1-212ENST00000556547 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
CASC1-212ENST00000556547 NUBP1P53384 320 aa10.99□□□□□ -0.65
CASC1-212ENST00000556547 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
CASC1-212ENST00000556547 FAM212AQ96EL1 285 aa10.99□□□□□ -0.65
CASC1-212ENST00000556547 CREBZFQ9NS37 354 aa10.97□□□□□ -0.65
CASC1-212ENST00000556547 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
CASC1-212ENST00000556547 CHGAP10645 457 aaKnown RBP10.95□□□□□ -0.66
CASC1-212ENST00000556547 PAXIP1Q6ZW49 1069 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms