RNA–Protein interactions for RNA: ENST00000556239.5

KLHL28-204, Transcript of kelch like family member 28, humanhuman

TSL 4

Gene KLHL28, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-204ENST00000556239 AEBP2Q6ZN18 517 aaPredicted RBP16.02■□□□□ 0.16
KLHL28-204ENST00000556239 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
KLHL28-204ENST00000556239 PHF23Q9BUL5 403 aaPredicted RBP13.95□□□□□ -0.18
KLHL28-204ENST00000556239 SENP3Q9H4L4 574 aaPredicted RBP13.57□□□□□ -0.24
KLHL28-204ENST00000556239 PLPPR3Q6T4P5 718 aa12.98□□□□□ -0.33
KLHL28-204ENST00000556239 FOXD1Q16676 465 aa12.57□□□□□ -0.4
KLHL28-204ENST00000556239 ADRA2BP18089 450 aa12.28□□□□□ -0.44
KLHL28-204ENST00000556239 PPP6R1Q9UPN7 881 aa12.26□□□□□ -0.45
KLHL28-204ENST00000556239 PIAS4Q8N2W9 510 aaPredicted RBP11.93□□□□□ -0.5
KLHL28-204ENST00000556239 MSH5O43196 834 aa11.52□□□□□ -0.57
KLHL28-204ENST00000556239 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
KLHL28-204ENST00000556239 KCNA4P22459 653 aa11.43□□□□□ -0.58
KLHL28-204ENST00000556239 SCAF1Q9H7N4 1312 aaKnown RBP11.26□□□□□ -0.61
KLHL28-204ENST00000556239 NCBP3Q53F19 620 aaKnown RBP11.25□□□□□ -0.61
KLHL28-204ENST00000556239 CNKSR2Q8WXI2 1034 aa11.1□□□□□ -0.63
KLHL28-204ENST00000556239 MAPK8IP2Q13387 824 aaPredicted RBP11.09□□□□□ -0.63
KLHL28-204ENST00000556239 NPM3O75607 178 aaKnown RBP11.05□□□□□ -0.64
KLHL28-204ENST00000556239 SLC4A1APQ9BWU0 796 aaKnown RBP10.94□□□□□ -0.66
KLHL28-204ENST00000556239 EHMT2Q96KQ7 1210 aa10.89□□□□□ -0.67
KLHL28-204ENST00000556239 DMRT2Q9Y5R5 561 aa10.85□□□□□ -0.67
KLHL28-204ENST00000556239 RNF216Q9NWF9 866 aaPredicted RBP10.82□□□□□ -0.68
KLHL28-204ENST00000556239 HOXD11P31277 338 aaPredicted RBP10.7□□□□□ -0.7
KLHL28-204ENST00000556239 DNAJC5BQ9UF47 199 aa10.63□□□□□ -0.71
KLHL28-204ENST00000556239 CSRNP3Q8WYN3 585 aa10.62□□□□□ -0.71
KLHL28-204ENST00000556239 ZBTB22O15209 634 aa10.49□□□□□ -0.73
KLHL28-204ENST00000556239 DCAF8L1A6NGE4 600 aa10.46□□□□□ -0.73
KLHL28-204ENST00000556239 FOXD4L1Q9NU39 408 aa10.46□□□□□ -0.73
KLHL28-204ENST00000556239 SLC4A2P04920 1241 aa10.37□□□□□ -0.75
KLHL28-204ENST00000556239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.27□□□□□ -0.77
KLHL28-204ENST00000556239 MYCNP04198 464 aaPredicted RBP10.21□□□□□ -0.77
KLHL28-204ENST00000556239 POTEDQ86YR6 584 aa10.13□□□□□ -0.79
KLHL28-204ENST00000556239 ATXN8OSP0DMR3 200 aa10.07□□□□□ -0.8
KLHL28-204ENST00000556239 U3KPZ7 1027 aaPredicted RBP10.07□□□□□ -0.8
KLHL28-204ENST00000556239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.05□□□□□ -0.8
KLHL28-204ENST00000556239 HNRNPUL2Q1KMD3 747 aaKnown RBP10.05□□□□□ -0.8
KLHL28-204ENST00000556239 SAMD1Q6SPF0 538 aaPredicted RBP10.01□□□□□ -0.81
KLHL28-204ENST00000556239 ATF5Q9Y2D1 282 aaPredicted RBP9.92□□□□□ -0.82
KLHL28-204ENST00000556239 APLP2Q06481 763 aa9.9□□□□□ -0.82
KLHL28-204ENST00000556239 RNF39Q9H2S5 420 aa9.87□□□□□ -0.83
KLHL28-204ENST00000556239 C1QBPQ07021 282 aaKnown RBP9.78□□□□□ -0.84
KLHL28-204ENST00000556239 ZNF219Q9P2Y4 722 aaPredicted RBP9.77□□□□□ -0.85
KLHL28-204ENST00000556239 TRHP20396 242 aaPredicted RBP9.75□□□□□ -0.85
KLHL28-204ENST00000556239 SPINK5Q9NQ38 1064 aaPredicted RBP9.75□□□□□ -0.85
KLHL28-204ENST00000556239 CAPN15O75808 1086 aa9.74□□□□□ -0.85
KLHL28-204ENST00000556239 FKBP8Q14318 412 aa9.63□□□□□ -0.87
KLHL28-204ENST00000556239 POLA2Q14181 598 aa9.62□□□□□ -0.87
KLHL28-204ENST00000556239 ABCB7O75027 752 aa9.56□□□□□ -0.88
KLHL28-204ENST00000556239 FBLN2P98095 1184 aa9.53□□□□□ -0.88
KLHL28-204ENST00000556239 CACNB1Q02641 598 aaPredicted RBP9.53□□□□□ -0.88
KLHL28-204ENST00000556239 DSG3P32926 999 aa9.48□□□□□ -0.89
KLHL28-204ENST00000556239 MKRN4PQ13434 485 aaPredicted RBP9.48□□□□□ -0.89
KLHL28-204ENST00000556239 ZBTB12Q9Y330 459 aaPredicted RBP9.45□□□□□ -0.9
KLHL28-204ENST00000556239 SPDYE4A6NLX3 237 aa9.41□□□□□ -0.9
KLHL28-204ENST00000556239 OSCARQ8IYS5 282 aa9.26□□□□□ -0.93
KLHL28-204ENST00000556239 ZNF692Q9BU19 519 aaPredicted RBP9.25□□□□□ -0.93
KLHL28-204ENST00000556239 FBXO3Q9UK99 471 aa9.23□□□□□ -0.93
KLHL28-204ENST00000556239 SPDYE2BA6NHP3 402 aa9.21□□□□□ -0.94
KLHL28-204ENST00000556239 SPDYE6P0CI01 402 aa9.21□□□□□ -0.94
KLHL28-204ENST00000556239 SPDYE2Q495Y8 402 aa9.21□□□□□ -0.94
KLHL28-204ENST00000556239 PROM2Q8N271 834 aa9.21□□□□□ -0.94
KLHL28-204ENST00000556239 SSUH2Q9Y2M2 353 aa9.13□□□□□ -0.95
KLHL28-204ENST00000556239 AMER1Q5JTC6 1135 aaPredicted RBP9.11□□□□□ -0.95
KLHL28-204ENST00000556239 PABPN1Q86U42 306 aaKnown RBP eCLIP9.11□□□□□ -0.95
KLHL28-204ENST00000556239 RTN4Q9NQC3 1192 aaKnown RBP9.09□□□□□ -0.95
KLHL28-204ENST00000556239 VASPP50552 380 aaPredicted RBP9.07□□□□□ -0.96
KLHL28-204ENST00000556239 RBM42Q9BTD8 480 aaKnown RBP9.04□□□□□ -0.96
KLHL28-204ENST00000556239 STAG3Q9UJ98 1225 aa9.02□□□□□ -0.97
KLHL28-204ENST00000556239 AKT1S1Q96B36 256 aa8.97□□□□□ -0.97
KLHL28-204ENST00000556239 IFNLR1Q8IU57 520 aaPredicted RBP8.96□□□□□ -0.98
KLHL28-204ENST00000556239 PLCD3Q8N3E9 789 aa8.95□□□□□ -0.98
KLHL28-204ENST00000556239 MIER1Q8N108 512 aa8.94□□□□□ -0.98
KLHL28-204ENST00000556239 KLHL34Q8N239 644 aa8.94□□□□□ -0.98
KLHL28-204ENST00000556239 SPDYE1Q8NFV5 336 aaPredicted RBP8.9□□□□□ -0.98
KLHL28-204ENST00000556239 PLEKHG5O94827 1062 aa8.89□□□□□ -0.99
KLHL28-204ENST00000556239 REM2Q8IYK8 340 aaPredicted RBP8.89□□□□□ -0.99
KLHL28-204ENST00000556239 CLEC11AQ9Y240 323 aa8.89□□□□□ -0.99
KLHL28-204ENST00000556239 SPOCK2Q92563 424 aa8.85□□□□□ -0.99
KLHL28-204ENST00000556239 PRR29P0C7W0 189 aa8.83□□□□□ -1
KLHL28-204ENST00000556239 ZBTB47Q9UFB7 747 aaPredicted RBP8.81□□□□□ -1
KLHL28-204ENST00000556239 PITPNM1O00562 1244 aa8.77□□□□□ -1.01
KLHL28-204ENST00000556239 PKD2Q13563 968 aa8.73□□□□□ -1.01
KLHL28-204ENST00000556239 CREBZFQ9NS37 354 aa8.72□□□□□ -1.01
KLHL28-204ENST00000556239 CIZ1Q9ULV3 898 aaPredicted RBP8.71□□□□□ -1.02
KLHL28-204ENST00000556239 DCAF8L2P0C7V8 631 aa8.7□□□□□ -1.02
KLHL28-204ENST00000556239 SLC24A1O60721 1099 aa8.68□□□□□ -1.02
KLHL28-204ENST00000556239 ECM2O94769 699 aaPredicted RBP8.68□□□□□ -1.02
KLHL28-204ENST00000556239 NPM1P06748 294 aaKnown RBP eCLIP8.63□□□□□ -1.03
KLHL28-204ENST00000556239 MNX1P50219 401 aaPredicted RBP8.63□□□□□ -1.03
KLHL28-204ENST00000556239 NUBP1P53384 320 aa8.63□□□□□ -1.03
KLHL28-204ENST00000556239 DCAF8Q5TAQ9 597 aa8.63□□□□□ -1.03
KLHL28-204ENST00000556239 CHADLQ6NUI6 762 aa8.63□□□□□ -1.03
KLHL28-204ENST00000556239 GSE1Q14687 1217 aa8.62□□□□□ -1.03
KLHL28-204ENST00000556239 PRKAR2AP13861 404 aaKnown RBP8.58□□□□□ -1.04
KLHL28-204ENST00000556239 CHRDL2Q6WN34 429 aa8.58□□□□□ -1.04
KLHL28-204ENST00000556239 FAM212AQ96EL1 285 aa8.58□□□□□ -1.04
KLHL28-204ENST00000556239 RGL2O15211 777 aa8.57□□□□□ -1.04
KLHL28-204ENST00000556239 TRIM41Q8WV44 630 aa8.57□□□□□ -1.04
KLHL28-204ENST00000556239 FXR2P51116 673 aaKnown RBP eCLIP8.56□□□□□ -1.04
KLHL28-204ENST00000556239 RASEFQ8IZ41 740 aa8.55□□□□□ -1.04
KLHL28-204ENST00000556239 FARP1Q9Y4F1 1045 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms