RNA–Protein interactions for RNA: ENST00000556130.1

LINC01588-210, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 2

Gene LINC01588, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-210ENST00000556130 CHIC1Q5VXU3 224 aa25.17■■□□□ 1.62
LINC01588-210ENST00000556130 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
LINC01588-210ENST00000556130 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
LINC01588-210ENST00000556130 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
LINC01588-210ENST00000556130 PLPPR3Q6T4P5 718 aa20.81■□□□□ 0.92
LINC01588-210ENST00000556130 FOXD1Q16676 465 aa19.45■□□□□ 0.7
LINC01588-210ENST00000556130 ADRA2BP18089 450 aa19.39■□□□□ 0.69
LINC01588-210ENST00000556130 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
LINC01588-210ENST00000556130 KCNA4P22459 653 aa18.85■□□□□ 0.61
LINC01588-210ENST00000556130 PIAS4Q8N2W9 510 aaPredicted RBP18.56■□□□□ 0.56
LINC01588-210ENST00000556130 EHMT2Q96KQ7 1210 aa18.48■□□□□ 0.55
LINC01588-210ENST00000556130 PPP4R3CPQ6ZMV5 832 aa18.41■□□□□ 0.54
LINC01588-210ENST00000556130 NCBP3Q53F19 620 aaKnown RBP18.21■□□□□ 0.51
LINC01588-210ENST00000556130 SLC4A1APQ9BWU0 796 aaKnown RBP18.13■□□□□ 0.49
LINC01588-210ENST00000556130 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
LINC01588-210ENST00000556130 NPM3O75607 178 aaKnown RBP17.87■□□□□ 0.45
LINC01588-210ENST00000556130 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
LINC01588-210ENST00000556130 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
LINC01588-210ENST00000556130 MSH5O43196 834 aa17.69■□□□□ 0.42
LINC01588-210ENST00000556130 ZBTB22O15209 634 aa17.34■□□□□ 0.37
LINC01588-210ENST00000556130 MAPK8IP2Q13387 824 aaPredicted RBP17.3■□□□□ 0.36
LINC01588-210ENST00000556130 DNAJC5BQ9UF47 199 aa17.29■□□□□ 0.36
LINC01588-210ENST00000556130 RNF216Q9NWF9 866 aaPredicted RBP17.2■□□□□ 0.34
LINC01588-210ENST00000556130 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
LINC01588-210ENST00000556130 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
LINC01588-210ENST00000556130 HOXD11P31277 338 aaPredicted RBP16.91■□□□□ 0.3
LINC01588-210ENST00000556130 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
LINC01588-210ENST00000556130 MYCNP04198 464 aaPredicted RBP16.54■□□□□ 0.24
LINC01588-210ENST00000556130 ATXN8OSP0DMR3 200 aa16.53■□□□□ 0.24
LINC01588-210ENST00000556130 DCAF8L1A6NGE4 600 aa16.19■□□□□ 0.18
LINC01588-210ENST00000556130 FKBP8Q14318 412 aa16.15■□□□□ 0.18
LINC01588-210ENST00000556130 AMER1Q5JTC6 1135 aaPredicted RBP16.14■□□□□ 0.17
LINC01588-210ENST00000556130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.17
LINC01588-210ENST00000556130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
LINC01588-210ENST00000556130 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.16
LINC01588-210ENST00000556130 RTN4Q9NQC3 1192 aaKnown RBP16.06■□□□□ 0.16
LINC01588-210ENST00000556130 SAMD1Q6SPF0 538 aaPredicted RBP16.04■□□□□ 0.16
LINC01588-210ENST00000556130 ATF5Q9Y2D1 282 aaPredicted RBP15.97■□□□□ 0.15
LINC01588-210ENST00000556130 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
LINC01588-210ENST00000556130 POTEDQ86YR6 584 aa15.83■□□□□ 0.12
LINC01588-210ENST00000556130 SLC24A1O60721 1099 aa15.82■□□□□ 0.12
LINC01588-210ENST00000556130 APLP2Q06481 763 aa15.74■□□□□ 0.11
LINC01588-210ENST00000556130 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
LINC01588-210ENST00000556130 FBXO3Q9UK99 471 aa15.43■□□□□ 0.06
LINC01588-210ENST00000556130 SPDYE4A6NLX3 237 aa15.41■□□□□ 0.06
LINC01588-210ENST00000556130 FBLN2P98095 1184 aa15.34■□□□□ 0.05
LINC01588-210ENST00000556130 MKRN4PQ13434 485 aaPredicted RBP15.33■□□□□ 0.04
LINC01588-210ENST00000556130 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
LINC01588-210ENST00000556130 PROM2Q8N271 834 aa15.26■□□□□ 0.03
LINC01588-210ENST00000556130 SPINK5Q9NQ38 1064 aaPredicted RBP15.24■□□□□ 0.03
LINC01588-210ENST00000556130 POLA2Q14181 598 aa15.22■□□□□ 0.03
LINC01588-210ENST00000556130 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
LINC01588-210ENST00000556130 CAPN15O75808 1086 aa15.18■□□□□ 0.02
LINC01588-210ENST00000556130 VASPP50552 380 aaPredicted RBP15.15■□□□□ 0.02
LINC01588-210ENST00000556130 C1QBPQ07021 282 aaKnown RBP15.1■□□□□ 0.01
LINC01588-210ENST00000556130 ZBTB12Q9Y330 459 aaPredicted RBP15.09■□□□□ 0.01
LINC01588-210ENST00000556130 IFNLR1Q8IU57 520 aaPredicted RBP14.98□□□□□ -0.01
LINC01588-210ENST00000556130 ABCB7O75027 752 aa14.93□□□□□ -0.02
LINC01588-210ENST00000556130 PLCB2Q00722 1185 aa14.85□□□□□ -0.03
LINC01588-210ENST00000556130 DCAF8L2P0C7V8 631 aa14.81□□□□□ -0.04
LINC01588-210ENST00000556130 PKD2Q13563 968 aa14.77□□□□□ -0.05
LINC01588-210ENST00000556130 ZNF692Q9BU19 519 aaPredicted RBP14.77□□□□□ -0.05
LINC01588-210ENST00000556130 STAG3Q9UJ98 1225 aa14.74□□□□□ -0.05
LINC01588-210ENST00000556130 KLHL34Q8N239 644 aa14.73□□□□□ -0.05
LINC01588-210ENST00000556130 SPDYE2BA6NHP3 402 aa14.72□□□□□ -0.05
LINC01588-210ENST00000556130 SPDYE6P0CI01 402 aa14.72□□□□□ -0.05
LINC01588-210ENST00000556130 DSG3P32926 999 aa14.72□□□□□ -0.05
LINC01588-210ENST00000556130 SPDYE2Q495Y8 402 aa14.72□□□□□ -0.05
LINC01588-210ENST00000556130 SPOCK2Q92563 424 aa14.71□□□□□ -0.05
LINC01588-210ENST00000556130 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
LINC01588-210ENST00000556130 SSUH2Q9Y2M2 353 aa14.66□□□□□ -0.06
LINC01588-210ENST00000556130 HAP1P54257 671 aaPredicted RBP14.64□□□□□ -0.07
LINC01588-210ENST00000556130 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
LINC01588-210ENST00000556130 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
LINC01588-210ENST00000556130 ECM2O94769 699 aaPredicted RBP14.57□□□□□ -0.08
LINC01588-210ENST00000556130 MIER1Q8N108 512 aa14.54□□□□□ -0.08
LINC01588-210ENST00000556130 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.5□□□□□ -0.09
LINC01588-210ENST00000556130 BBXQ8WY36 941 aaPredicted RBP14.49□□□□□ -0.09
LINC01588-210ENST00000556130 VSIG10Q8N0Z9 540 aa14.47□□□□□ -0.09
LINC01588-210ENST00000556130 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
LINC01588-210ENST00000556130 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
LINC01588-210ENST00000556130 BCANQ96GW7 911 aa14.38□□□□□ -0.11
LINC01588-210ENST00000556130 RGL2O15211 777 aa14.37□□□□□ -0.11
LINC01588-210ENST00000556130 NPM1P06748 294 aaKnown RBP eCLIP14.37□□□□□ -0.11
LINC01588-210ENST00000556130 PAXIP1Q6ZW49 1069 aaPredicted RBP14.35□□□□□ -0.11
LINC01588-210ENST00000556130 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.12
LINC01588-210ENST00000556130 CFAP44Q96MT7 982 aa14.3□□□□□ -0.12
LINC01588-210ENST00000556130 TRIM41Q8WV44 630 aa14.29□□□□□ -0.12
LINC01588-210ENST00000556130 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
LINC01588-210ENST00000556130 SPRYD3Q8NCJ5 442 aa14.25□□□□□ -0.13
LINC01588-210ENST00000556130 CHGAP10645 457 aaKnown RBP14.21□□□□□ -0.13
LINC01588-210ENST00000556130 KDM2AQ9Y2K7 1162 aa14.2□□□□□ -0.14
LINC01588-210ENST00000556130 GSE1Q14687 1217 aa14.16□□□□□ -0.14
LINC01588-210ENST00000556130 TAOK2Q9UL54 1235 aa14.11□□□□□ -0.15
LINC01588-210ENST00000556130 HS6ST3Q8IZP7 471 aa14.1□□□□□ -0.15
LINC01588-210ENST00000556130 SPDYE1Q8NFV5 336 aaPredicted RBP14.1□□□□□ -0.15
LINC01588-210ENST00000556130 TSHZ2Q9NRE2 1034 aa14.09□□□□□ -0.15
LINC01588-210ENST00000556130 NUBP1P53384 320 aa14.06□□□□□ -0.16
LINC01588-210ENST00000556130 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
LINC01588-210ENST00000556130 AKT1S1Q96B36 256 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms