RNA–Protein interactions for RNA: ENST00000556106.1

RALGAPA1-212, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 5

Gene RALGAPA1, Length 1,029 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-212ENST00000556106 AEBP2Q6ZN18 517 aaPredicted RBP28.77■■■□□ 2.2
RALGAPA1-212ENST00000556106 CHIC1Q5VXU3 224 aa28.41■■■□□ 2.14
RALGAPA1-212ENST00000556106 PHF23Q9BUL5 403 aaPredicted RBP25■■□□□ 1.59
RALGAPA1-212ENST00000556106 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
RALGAPA1-212ENST00000556106 PLPPR3Q6T4P5 718 aa23.21■■□□□ 1.31
RALGAPA1-212ENST00000556106 POTEDQ86YR6 584 aa23.01■■□□□ 1.27
RALGAPA1-212ENST00000556106 FOXD1Q16676 465 aa22.58■■□□□ 1.21
RALGAPA1-212ENST00000556106 ADRA2BP18089 450 aa21.95■■□□□ 1.1
RALGAPA1-212ENST00000556106 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
RALGAPA1-212ENST00000556106 PIAS4Q8N2W9 510 aaPredicted RBP21.38■■□□□ 1.01
RALGAPA1-212ENST00000556106 MSH5O43196 834 aa21■□□□□ 0.95
RALGAPA1-212ENST00000556106 PPP4R3CPQ6ZMV5 832 aa20.48■□□□□ 0.87
RALGAPA1-212ENST00000556106 KCNA4P22459 653 aa20.34■□□□□ 0.85
RALGAPA1-212ENST00000556106 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
RALGAPA1-212ENST00000556106 NCBP3Q53F19 620 aaKnown RBP20.04■□□□□ 0.8
RALGAPA1-212ENST00000556106 CNKSR2Q8WXI2 1034 aa19.85■□□□□ 0.77
RALGAPA1-212ENST00000556106 MAPK8IP2Q13387 824 aaPredicted RBP19.8■□□□□ 0.76
RALGAPA1-212ENST00000556106 NPM3O75607 178 aaKnown RBP19.74■□□□□ 0.75
RALGAPA1-212ENST00000556106 DMRT2Q9Y5R5 561 aa19.52■□□□□ 0.72
RALGAPA1-212ENST00000556106 SLC4A1APQ9BWU0 796 aaKnown RBP19.43■□□□□ 0.7
RALGAPA1-212ENST00000556106 RNF216Q9NWF9 866 aaPredicted RBP19.39■□□□□ 0.69
RALGAPA1-212ENST00000556106 HOXD11P31277 338 aaPredicted RBP19.23■□□□□ 0.67
RALGAPA1-212ENST00000556106 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
RALGAPA1-212ENST00000556106 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
RALGAPA1-212ENST00000556106 CACNB1Q02641 598 aaPredicted RBP18.94■□□□□ 0.62
RALGAPA1-212ENST00000556106 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
RALGAPA1-212ENST00000556106 ZBTB22O15209 634 aa18.72■□□□□ 0.59
RALGAPA1-212ENST00000556106 FOXD4L1Q9NU39 408 aa18.65■□□□□ 0.58
RALGAPA1-212ENST00000556106 DCAF8L1A6NGE4 600 aa18.63■□□□□ 0.57
RALGAPA1-212ENST00000556106 SLC4A2P04920 1241 aa18.56■□□□□ 0.56
RALGAPA1-212ENST00000556106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.31■□□□□ 0.52
RALGAPA1-212ENST00000556106 MYCNP04198 464 aaPredicted RBP18.25■□□□□ 0.51
RALGAPA1-212ENST00000556106 U3KPZ7 1027 aaPredicted RBP18.06■□□□□ 0.48
RALGAPA1-212ENST00000556106 ATXN8OSP0DMR3 200 aa17.99■□□□□ 0.47
RALGAPA1-212ENST00000556106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
RALGAPA1-212ENST00000556106 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
RALGAPA1-212ENST00000556106 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
RALGAPA1-212ENST00000556106 SAMD1Q6SPF0 538 aaPredicted RBP17.9■□□□□ 0.46
RALGAPA1-212ENST00000556106 POTEHQ6S545 545 aa17.74■□□□□ 0.43
RALGAPA1-212ENST00000556106 ATF5Q9Y2D1 282 aaPredicted RBP17.71■□□□□ 0.43
RALGAPA1-212ENST00000556106 APLP2Q06481 763 aa17.7■□□□□ 0.42
RALGAPA1-212ENST00000556106 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
RALGAPA1-212ENST00000556106 SPINK5Q9NQ38 1064 aaPredicted RBP17.45■□□□□ 0.38
RALGAPA1-212ENST00000556106 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
RALGAPA1-212ENST00000556106 CAPN15O75808 1086 aa17.37■□□□□ 0.37
RALGAPA1-212ENST00000556106 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
RALGAPA1-212ENST00000556106 POLA2Q14181 598 aa17.14■□□□□ 0.33
RALGAPA1-212ENST00000556106 ABCB7O75027 752 aa17.06■□□□□ 0.32
RALGAPA1-212ENST00000556106 FKBP8Q14318 412 aa17.03■□□□□ 0.32
RALGAPA1-212ENST00000556106 DSG3P32926 999 aa17.02■□□□□ 0.32
RALGAPA1-212ENST00000556106 FBLN2P98095 1184 aa16.97■□□□□ 0.31
RALGAPA1-212ENST00000556106 MKRN4PQ13434 485 aaPredicted RBP16.96■□□□□ 0.31
RALGAPA1-212ENST00000556106 ZBTB12Q9Y330 459 aaPredicted RBP16.93■□□□□ 0.3
RALGAPA1-212ENST00000556106 SPDYE4A6NLX3 237 aa16.73■□□□□ 0.27
RALGAPA1-212ENST00000556106 OSCARQ8IYS5 282 aa16.57■□□□□ 0.24
RALGAPA1-212ENST00000556106 PROM2Q8N271 834 aa16.53■□□□□ 0.24
RALGAPA1-212ENST00000556106 SPDYE2BA6NHP3 402 aa16.48■□□□□ 0.23
RALGAPA1-212ENST00000556106 SPDYE6P0CI01 402 aa16.48■□□□□ 0.23
RALGAPA1-212ENST00000556106 SPDYE2Q495Y8 402 aa16.48■□□□□ 0.23
RALGAPA1-212ENST00000556106 ZNF692Q9BU19 519 aaPredicted RBP16.44■□□□□ 0.22
RALGAPA1-212ENST00000556106 SSUH2Q9Y2M2 353 aa16.39■□□□□ 0.21
RALGAPA1-212ENST00000556106 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
RALGAPA1-212ENST00000556106 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
RALGAPA1-212ENST00000556106 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
RALGAPA1-212ENST00000556106 VASPP50552 380 aaPredicted RBP16.13■□□□□ 0.17
RALGAPA1-212ENST00000556106 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
RALGAPA1-212ENST00000556106 AMER1Q5JTC6 1135 aaPredicted RBP16.07■□□□□ 0.16
RALGAPA1-212ENST00000556106 STAG3Q9UJ98 1225 aa16.05■□□□□ 0.16
RALGAPA1-212ENST00000556106 RTN4Q9NQC3 1192 aaKnown RBP16■□□□□ 0.15
RALGAPA1-212ENST00000556106 SPDYE1Q8NFV5 336 aaPredicted RBP15.92■□□□□ 0.14
RALGAPA1-212ENST00000556106 IFNLR1Q8IU57 520 aaPredicted RBP15.91■□□□□ 0.14
RALGAPA1-212ENST00000556106 REM2Q8IYK8 340 aaPredicted RBP15.91■□□□□ 0.14
RALGAPA1-212ENST00000556106 SP7Q8TDD2 431 aaPredicted RBP15.91■□□□□ 0.14
RALGAPA1-212ENST00000556106 PLCD3Q8N3E9 789 aa15.84■□□□□ 0.13
RALGAPA1-212ENST00000556106 MIER1Q8N108 512 aa15.81■□□□□ 0.12
RALGAPA1-212ENST00000556106 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
RALGAPA1-212ENST00000556106 KLHL34Q8N239 644 aa15.75■□□□□ 0.11
RALGAPA1-212ENST00000556106 PITPNM1O00562 1244 aa15.74■□□□□ 0.11
RALGAPA1-212ENST00000556106 PLEKHG5O94827 1062 aa15.74■□□□□ 0.11
RALGAPA1-212ENST00000556106 CHRDL2Q6WN34 429 aa15.73■□□□□ 0.11
RALGAPA1-212ENST00000556106 PRR29P0C7W0 189 aa15.71■□□□□ 0.11
RALGAPA1-212ENST00000556106 SPOCK2Q92563 424 aa15.69■□□□□ 0.1
RALGAPA1-212ENST00000556106 ZBTB47Q9UFB7 747 aaPredicted RBP15.67■□□□□ 0.1
RALGAPA1-212ENST00000556106 CREBZFQ9NS37 354 aa15.59■□□□□ 0.09
RALGAPA1-212ENST00000556106 PKD2Q13563 968 aa15.5■□□□□ 0.07
RALGAPA1-212ENST00000556106 MNX1P50219 401 aaPredicted RBP15.48■□□□□ 0.07
RALGAPA1-212ENST00000556106 NUBP1P53384 320 aa15.4■□□□□ 0.06
RALGAPA1-212ENST00000556106 FXR2P51116 673 aaKnown RBP eCLIP15.39■□□□□ 0.05
RALGAPA1-212ENST00000556106 CHADLQ6NUI6 762 aa15.39■□□□□ 0.05
RALGAPA1-212ENST00000556106 PLSCR2Q9NRY7 297 aa15.37■□□□□ 0.05
RALGAPA1-212ENST00000556106 CIZ1Q9ULV3 898 aaPredicted RBP15.37■□□□□ 0.05
RALGAPA1-212ENST00000556106 ECM2O94769 699 aaPredicted RBP15.35■□□□□ 0.05
RALGAPA1-212ENST00000556106 NPM1P06748 294 aaKnown RBP eCLIP15.35■□□□□ 0.05
RALGAPA1-212ENST00000556106 PRKAR2AP13861 404 aaKnown RBP15.34■□□□□ 0.05
RALGAPA1-212ENST00000556106 GSE1Q14687 1217 aa15.32■□□□□ 0.04
RALGAPA1-212ENST00000556106 PIP4P2Q8N4L2 257 aa15.29■□□□□ 0.04
RALGAPA1-212ENST00000556106 FAM212AQ96EL1 285 aa15.29■□□□□ 0.04
RALGAPA1-212ENST00000556106 FARP1Q9Y4F1 1045 aaPredicted RBP15.29■□□□□ 0.04
RALGAPA1-212ENST00000556106 TRIM41Q8WV44 630 aa15.28■□□□□ 0.04
RALGAPA1-212ENST00000556106 DCAF8Q5TAQ9 597 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms