RNA–Protein interactions for RNA: ENST00000556006.6

CASC1-210, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 1,774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-210ENST00000556006 AEBP2Q6ZN18 517 aaPredicted RBP20.72■□□□□ 0.91
CASC1-210ENST00000556006 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
CASC1-210ENST00000556006 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
CASC1-210ENST00000556006 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
CASC1-210ENST00000556006 FOXD1Q16676 465 aa16.5■□□□□ 0.23
CASC1-210ENST00000556006 PLPPR3Q6T4P5 718 aa15.64■□□□□ 0.1
CASC1-210ENST00000556006 MSH5O43196 834 aa15.53■□□□□ 0.08
CASC1-210ENST00000556006 PIAS4Q8N2W9 510 aaPredicted RBP15.41■□□□□ 0.06
CASC1-210ENST00000556006 PPP6R1Q9UPN7 881 aa15.32■□□□□ 0.04
CASC1-210ENST00000556006 ADRA2BP18089 450 aa15.28■□□□□ 0.04
CASC1-210ENST00000556006 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
CASC1-210ENST00000556006 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
CASC1-210ENST00000556006 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
CASC1-210ENST00000556006 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
CASC1-210ENST00000556006 PPP4R3CPQ6ZMV5 832 aa13.68□□□□□ -0.22
CASC1-210ENST00000556006 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
CASC1-210ENST00000556006 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
CASC1-210ENST00000556006 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
CASC1-210ENST00000556006 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
CASC1-210ENST00000556006 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
CASC1-210ENST00000556006 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
CASC1-210ENST00000556006 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
CASC1-210ENST00000556006 DNAJC5BQ9UF47 199 aa13.09□□□□□ -0.31
CASC1-210ENST00000556006 C1QBPQ07021 282 aaKnown RBP13.03□□□□□ -0.32
CASC1-210ENST00000556006 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
CASC1-210ENST00000556006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.35
CASC1-210ENST00000556006 KCNA4P22459 653 aa12.59□□□□□ -0.39
CASC1-210ENST00000556006 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
CASC1-210ENST00000556006 CAPN15O75808 1086 aa12.38□□□□□ -0.43
CASC1-210ENST00000556006 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
CASC1-210ENST00000556006 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
CASC1-210ENST00000556006 DSG3P32926 999 aa12.33□□□□□ -0.44
CASC1-210ENST00000556006 APLP2Q06481 763 aa12.28□□□□□ -0.44
CASC1-210ENST00000556006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.21□□□□□ -0.45
CASC1-210ENST00000556006 HNRNPUL2Q1KMD3 747 aaKnown RBP12.21□□□□□ -0.45
CASC1-210ENST00000556006 ZNF219Q9P2Y4 722 aaPredicted RBP12.18□□□□□ -0.46
CASC1-210ENST00000556006 TRHP20396 242 aaPredicted RBP12.15□□□□□ -0.46
CASC1-210ENST00000556006 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
CASC1-210ENST00000556006 ABCB7O75027 752 aa12.07□□□□□ -0.48
CASC1-210ENST00000556006 MYCNP04198 464 aaPredicted RBP12□□□□□ -0.49
CASC1-210ENST00000556006 POTEHQ6S545 545 aa11.95□□□□□ -0.5
CASC1-210ENST00000556006 SLC4A1APQ9BWU0 796 aaKnown RBP11.95□□□□□ -0.5
CASC1-210ENST00000556006 FOXD4L1Q9NU39 408 aa11.82□□□□□ -0.52
CASC1-210ENST00000556006 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
CASC1-210ENST00000556006 EHMT2Q96KQ7 1210 aa11.81□□□□□ -0.52
CASC1-210ENST00000556006 POLA2Q14181 598 aa11.79□□□□□ -0.52
CASC1-210ENST00000556006 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
CASC1-210ENST00000556006 ZBTB22O15209 634 aa11.64□□□□□ -0.55
CASC1-210ENST00000556006 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
CASC1-210ENST00000556006 ZBTB12Q9Y330 459 aaPredicted RBP11.63□□□□□ -0.55
CASC1-210ENST00000556006 CHRDL2Q6WN34 429 aa11.55□□□□□ -0.56
CASC1-210ENST00000556006 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
CASC1-210ENST00000556006 ATXN8OSP0DMR3 200 aa11.49□□□□□ -0.57
CASC1-210ENST00000556006 OSCARQ8IYS5 282 aa11.44□□□□□ -0.58
CASC1-210ENST00000556006 REM2Q8IYK8 340 aaPredicted RBP11.38□□□□□ -0.59
CASC1-210ENST00000556006 FBLN2P98095 1184 aa11.28□□□□□ -0.6
CASC1-210ENST00000556006 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
CASC1-210ENST00000556006 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
CASC1-210ENST00000556006 SPDYE2BA6NHP3 402 aa11.24□□□□□ -0.61
CASC1-210ENST00000556006 SPDYE6P0CI01 402 aa11.24□□□□□ -0.61
CASC1-210ENST00000556006 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
CASC1-210ENST00000556006 FXR2P51116 673 aaKnown RBP eCLIP11.19□□□□□ -0.62
CASC1-210ENST00000556006 SP7Q8TDD2 431 aaPredicted RBP11.16□□□□□ -0.62
CASC1-210ENST00000556006 MKRN4PQ13434 485 aaPredicted RBP11.15□□□□□ -0.62
CASC1-210ENST00000556006 SSUH2Q9Y2M2 353 aa11.08□□□□□ -0.64
CASC1-210ENST00000556006 SPDYE1Q8NFV5 336 aaPredicted RBP11.07□□□□□ -0.64
CASC1-210ENST00000556006 HAX1O00165 279 aa11.06□□□□□ -0.64
CASC1-210ENST00000556006 ZNF692Q9BU19 519 aaPredicted RBP11.05□□□□□ -0.64
CASC1-210ENST00000556006 CLEC11AQ9Y240 323 aa11□□□□□ -0.65
CASC1-210ENST00000556006 PRKAR2AP13861 404 aaKnown RBP10.96□□□□□ -0.65
CASC1-210ENST00000556006 EVX2Q03828 476 aa10.89□□□□□ -0.67
CASC1-210ENST00000556006 PABPN1Q86U42 306 aaKnown RBP eCLIP10.89□□□□□ -0.67
CASC1-210ENST00000556006 C19orf67A6NJJ6 358 aa10.85□□□□□ -0.67
CASC1-210ENST00000556006 PRR29P0C7W0 189 aa10.82□□□□□ -0.68
CASC1-210ENST00000556006 CHADLQ6NUI6 762 aa10.8□□□□□ -0.68
CASC1-210ENST00000556006 GABBR2O75899 941 aa10.68□□□□□ -0.7
CASC1-210ENST00000556006 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
CASC1-210ENST00000556006 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
CASC1-210ENST00000556006 CD44P16070 742 aaKnown RBP10.62□□□□□ -0.71
CASC1-210ENST00000556006 SPDYE4A6NLX3 237 aa10.59□□□□□ -0.71
CASC1-210ENST00000556006 CLCN6P51797 869 aa10.54□□□□□ -0.72
CASC1-210ENST00000556006 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
CASC1-210ENST00000556006 ZNF579Q8NAF0 562 aaKnown RBP10.48□□□□□ -0.73
CASC1-210ENST00000556006 FKBP8Q14318 412 aa10.47□□□□□ -0.73
CASC1-210ENST00000556006 LHX8Q68G74 356 aa10.47□□□□□ -0.73
CASC1-210ENST00000556006 ZRANB1Q9UGI0 708 aa10.45□□□□□ -0.74
CASC1-210ENST00000556006 POTEIP0CG38 1075 aa10.44□□□□□ -0.74
CASC1-210ENST00000556006 NPM1P06748 294 aaKnown RBP eCLIP10.38□□□□□ -0.75
CASC1-210ENST00000556006 DCBLD2Q96PD2 775 aa10.38□□□□□ -0.75
CASC1-210ENST00000556006 PAK3O75914 559 aaPredicted RBP10.37□□□□□ -0.75
CASC1-210ENST00000556006 PROM2Q8N271 834 aa10.35□□□□□ -0.75
CASC1-210ENST00000556006 MNX1P50219 401 aaPredicted RBP10.34□□□□□ -0.75
CASC1-210ENST00000556006 GALR2O43603 387 aaPredicted RBP10.31□□□□□ -0.76
CASC1-210ENST00000556006 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
CASC1-210ENST00000556006 MS4A3Q96HJ5 214 aa10.16□□□□□ -0.78
CASC1-210ENST00000556006 PLEKHG5O94827 1062 aa10.14□□□□□ -0.79
CASC1-210ENST00000556006 TSPYL2Q9H2G4 693 aaPredicted RBP10.14□□□□□ -0.79
CASC1-210ENST00000556006 ASTLQ6HA08 431 aaPredicted RBP10.11□□□□□ -0.79
CASC1-210ENST00000556006 PELP1Q8IZL8 1130 aaKnown RBP10.11□□□□□ -0.79
CASC1-210ENST00000556006 CCDC61Q9Y6R9 512 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms