RNA–Protein interactions for RNA: ENST00000555671.1

MLH3-209, Transcript of mutL homolog 3, humanhuman

TSL 5

Gene MLH3, Length 931 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-209ENST00000555671 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
MLH3-209ENST00000555671 AEBP2Q6ZN18 517 aaPredicted RBP18.6■□□□□ 0.57
MLH3-209ENST00000555671 PHF23Q9BUL5 403 aaPredicted RBP16.35■□□□□ 0.21
MLH3-209ENST00000555671 SENP3Q9H4L4 574 aaPredicted RBP15.95■□□□□ 0.14
MLH3-209ENST00000555671 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
MLH3-209ENST00000555671 FOXD1Q16676 465 aa14.72□□□□□ -0.05
MLH3-209ENST00000555671 ADRA2BP18089 450 aa14.4□□□□□ -0.1
MLH3-209ENST00000555671 PPP6R1Q9UPN7 881 aa14.3□□□□□ -0.12
MLH3-209ENST00000555671 PIAS4Q8N2W9 510 aaPredicted RBP14.03□□□□□ -0.16
MLH3-209ENST00000555671 MSH5O43196 834 aa13.79□□□□□ -0.2
MLH3-209ENST00000555671 KCNA4P22459 653 aa13.72□□□□□ -0.21
MLH3-209ENST00000555671 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
MLH3-209ENST00000555671 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
MLH3-209ENST00000555671 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
MLH3-209ENST00000555671 SCAF1Q9H7N4 1312 aaKnown RBP13.41□□□□□ -0.26
MLH3-209ENST00000555671 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
MLH3-209ENST00000555671 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
MLH3-209ENST00000555671 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
MLH3-209ENST00000555671 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
MLH3-209ENST00000555671 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
MLH3-209ENST00000555671 CSRNP3Q8WYN3 585 aa12.85□□□□□ -0.35
MLH3-209ENST00000555671 RNF216Q9NWF9 866 aaPredicted RBP12.81□□□□□ -0.36
MLH3-209ENST00000555671 DMRT2Q9Y5R5 561 aa12.72□□□□□ -0.37
MLH3-209ENST00000555671 DNAJC5BQ9UF47 199 aa12.62□□□□□ -0.39
MLH3-209ENST00000555671 FOXD4L1Q9NU39 408 aa12.61□□□□□ -0.39
MLH3-209ENST00000555671 HOXD11P31277 338 aaPredicted RBP12.58□□□□□ -0.4
MLH3-209ENST00000555671 ZBTB22O15209 634 aa12.52□□□□□ -0.41
MLH3-209ENST00000555671 DCAF8L1A6NGE4 600 aa12.36□□□□□ -0.43
MLH3-209ENST00000555671 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
MLH3-209ENST00000555671 SLC4A2P04920 1241 aa12.23□□□□□ -0.45
MLH3-209ENST00000555671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.18□□□□□ -0.46
MLH3-209ENST00000555671 ATXN8OSP0DMR3 200 aa12.13□□□□□ -0.47
MLH3-209ENST00000555671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.08□□□□□ -0.48
MLH3-209ENST00000555671 HNRNPUL2Q1KMD3 747 aaKnown RBP12.08□□□□□ -0.48
MLH3-209ENST00000555671 SAMD1Q6SPF0 538 aaPredicted RBP12□□□□□ -0.49
MLH3-209ENST00000555671 APLP2Q06481 763 aa11.93□□□□□ -0.5
MLH3-209ENST00000555671 CACNB1Q02641 598 aaPredicted RBP11.85□□□□□ -0.51
MLH3-209ENST00000555671 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
MLH3-209ENST00000555671 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
MLH3-209ENST00000555671 FKBP8Q14318 412 aa11.74□□□□□ -0.53
MLH3-209ENST00000555671 ATF5Q9Y2D1 282 aaPredicted RBP11.69□□□□□ -0.54
MLH3-209ENST00000555671 ZNF219Q9P2Y4 722 aaPredicted RBP11.63□□□□□ -0.55
MLH3-209ENST00000555671 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
MLH3-209ENST00000555671 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
MLH3-209ENST00000555671 CAPN15O75808 1086 aa11.51□□□□□ -0.57
MLH3-209ENST00000555671 FBLN2P98095 1184 aa11.48□□□□□ -0.57
MLH3-209ENST00000555671 AMER1Q5JTC6 1135 aaPredicted RBP11.48□□□□□ -0.57
MLH3-209ENST00000555671 SPINK5Q9NQ38 1064 aaPredicted RBP11.4□□□□□ -0.58
MLH3-209ENST00000555671 POLA2Q14181 598 aa11.37□□□□□ -0.59
MLH3-209ENST00000555671 ZBTB12Q9Y330 459 aaPredicted RBP11.36□□□□□ -0.59
MLH3-209ENST00000555671 SPDYE4A6NLX3 237 aa11.35□□□□□ -0.59
MLH3-209ENST00000555671 FBXO3Q9UK99 471 aa11.32□□□□□ -0.6
MLH3-209ENST00000555671 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
MLH3-209ENST00000555671 ABCB7O75027 752 aa11.25□□□□□ -0.61
MLH3-209ENST00000555671 MKRN4PQ13434 485 aaPredicted RBP11.22□□□□□ -0.61
MLH3-209ENST00000555671 DSG3P32926 999 aa11.06□□□□□ -0.64
MLH3-209ENST00000555671 ZNF692Q9BU19 519 aaPredicted RBP11.04□□□□□ -0.64
MLH3-209ENST00000555671 VASPP50552 380 aaPredicted RBP11.03□□□□□ -0.64
MLH3-209ENST00000555671 PROM2Q8N271 834 aa11.03□□□□□ -0.64
MLH3-209ENST00000555671 SLC24A1O60721 1099 aa11.01□□□□□ -0.65
MLH3-209ENST00000555671 SPDYE2BA6NHP3 402 aa10.99□□□□□ -0.65
MLH3-209ENST00000555671 SPDYE6P0CI01 402 aa10.99□□□□□ -0.65
MLH3-209ENST00000555671 SPDYE2Q495Y8 402 aa10.99□□□□□ -0.65
MLH3-209ENST00000555671 OSCARQ8IYS5 282 aa10.96□□□□□ -0.65
MLH3-209ENST00000555671 KLHL34Q8N239 644 aa10.9□□□□□ -0.66
MLH3-209ENST00000555671 STAG3Q9UJ98 1225 aa10.9□□□□□ -0.66
MLH3-209ENST00000555671 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
MLH3-209ENST00000555671 PABPN1Q86U42 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
MLH3-209ENST00000555671 DCAF8L2P0C7V8 631 aa10.86□□□□□ -0.67
MLH3-209ENST00000555671 PLCD3Q8N3E9 789 aa10.86□□□□□ -0.67
MLH3-209ENST00000555671 SSUH2Q9Y2M2 353 aa10.84□□□□□ -0.67
MLH3-209ENST00000555671 IFNLR1Q8IU57 520 aaPredicted RBP10.83□□□□□ -0.68
MLH3-209ENST00000555671 MIER1Q8N108 512 aa10.78□□□□□ -0.68
MLH3-209ENST00000555671 SPOCK2Q92563 424 aa10.77□□□□□ -0.69
MLH3-209ENST00000555671 ZBTB47Q9UFB7 747 aaPredicted RBP10.76□□□□□ -0.69
MLH3-209ENST00000555671 RBM42Q9BTD8 480 aaKnown RBP10.72□□□□□ -0.69
MLH3-209ENST00000555671 POTEHQ6S545 545 aa10.67□□□□□ -0.7
MLH3-209ENST00000555671 ECM2O94769 699 aaPredicted RBP10.64□□□□□ -0.71
MLH3-209ENST00000555671 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
MLH3-209ENST00000555671 PKD2Q13563 968 aa10.59□□□□□ -0.71
MLH3-209ENST00000555671 AKT1S1Q96B36 256 aa10.59□□□□□ -0.71
MLH3-209ENST00000555671 CIZ1Q9ULV3 898 aaPredicted RBP10.59□□□□□ -0.71
MLH3-209ENST00000555671 CLEC11AQ9Y240 323 aa10.57□□□□□ -0.72
MLH3-209ENST00000555671 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.54□□□□□ -0.72
MLH3-209ENST00000555671 PLCB2Q00722 1185 aa10.53□□□□□ -0.72
MLH3-209ENST00000555671 PRR29P0C7W0 189 aa10.52□□□□□ -0.73
MLH3-209ENST00000555671 TRIM41Q8WV44 630 aa10.5□□□□□ -0.73
MLH3-209ENST00000555671 HAP1P54257 671 aaPredicted RBP10.49□□□□□ -0.73
MLH3-209ENST00000555671 GSE1Q14687 1217 aa10.47□□□□□ -0.73
MLH3-209ENST00000555671 REM2Q8IYK8 340 aaPredicted RBP10.43□□□□□ -0.74
MLH3-209ENST00000555671 BBXQ8WY36 941 aaPredicted RBP10.42□□□□□ -0.74
MLH3-209ENST00000555671 TAOK2Q9UL54 1235 aa10.42□□□□□ -0.74
MLH3-209ENST00000555671 DCAF8Q5TAQ9 597 aa10.41□□□□□ -0.74
MLH3-209ENST00000555671 FAM212AQ96EL1 285 aa10.4□□□□□ -0.74
MLH3-209ENST00000555671 RGL2O15211 777 aa10.38□□□□□ -0.75
MLH3-209ENST00000555671 NPM1P06748 294 aaKnown RBP eCLIP10.37□□□□□ -0.75
MLH3-209ENST00000555671 CHGAP10645 457 aaKnown RBP10.35□□□□□ -0.75
MLH3-209ENST00000555671 CFAP44Q96MT7 982 aa10.35□□□□□ -0.75
MLH3-209ENST00000555671 PAXIP1Q6ZW49 1069 aaPredicted RBP10.34□□□□□ -0.75
MLH3-209ENST00000555671 CREBZFQ9NS37 354 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms