RNA–Protein interactions for RNA: ENST00000555350.1

LINC00645-201, long intergenic non-protein coding RNA 645, humanhuman

TSL 1 (best)

Gene LINC00645, Length 470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00645-201ENST00000555350 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
LINC00645-201ENST00000555350 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
LINC00645-201ENST00000555350 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
LINC00645-201ENST00000555350 PHF23Q9BUL5 403 aaPredicted RBP19.68■□□□□ 0.74
LINC00645-201ENST00000555350 FOXD1Q16676 465 aa18.55■□□□□ 0.56
LINC00645-201ENST00000555350 PLPPR3Q6T4P5 718 aa17.95■□□□□ 0.46
LINC00645-201ENST00000555350 PPP6R1Q9UPN7 881 aa17.52■□□□□ 0.4
LINC00645-201ENST00000555350 ADRA2BP18089 450 aa17.48■□□□□ 0.39
LINC00645-201ENST00000555350 PIAS4Q8N2W9 510 aaPredicted RBP17.39■□□□□ 0.37
LINC00645-201ENST00000555350 MSH5O43196 834 aa17.24■□□□□ 0.35
LINC00645-201ENST00000555350 POTEDQ86YR6 584 aa16.55■□□□□ 0.24
LINC00645-201ENST00000555350 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
LINC00645-201ENST00000555350 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
LINC00645-201ENST00000555350 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
LINC00645-201ENST00000555350 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
LINC00645-201ENST00000555350 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
LINC00645-201ENST00000555350 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
LINC00645-201ENST00000555350 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
LINC00645-201ENST00000555350 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
LINC00645-201ENST00000555350 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
LINC00645-201ENST00000555350 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
LINC00645-201ENST00000555350 KCNA4P22459 653 aa14.95□□□□□ -0.02
LINC00645-201ENST00000555350 RNF39Q9H2S5 420 aa14.75□□□□□ -0.05
LINC00645-201ENST00000555350 CACNB1Q02641 598 aaPredicted RBP14.7□□□□□ -0.06
LINC00645-201ENST00000555350 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
LINC00645-201ENST00000555350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.59□□□□□ -0.07
LINC00645-201ENST00000555350 C1QBPQ07021 282 aaKnown RBP14.51□□□□□ -0.09
LINC00645-201ENST00000555350 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
LINC00645-201ENST00000555350 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
LINC00645-201ENST00000555350 SLC4A1APQ9BWU0 796 aaKnown RBP14.12□□□□□ -0.15
LINC00645-201ENST00000555350 SPINK5Q9NQ38 1064 aaPredicted RBP14.08□□□□□ -0.16
LINC00645-201ENST00000555350 CAPN15O75808 1086 aa14.02□□□□□ -0.17
LINC00645-201ENST00000555350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
LINC00645-201ENST00000555350 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
LINC00645-201ENST00000555350 DSG3P32926 999 aa13.89□□□□□ -0.19
LINC00645-201ENST00000555350 MYCNP04198 464 aaPredicted RBP13.88□□□□□ -0.19
LINC00645-201ENST00000555350 SAMD1Q6SPF0 538 aaPredicted RBP13.87□□□□□ -0.19
LINC00645-201ENST00000555350 TRHP20396 242 aaPredicted RBP13.86□□□□□ -0.19
LINC00645-201ENST00000555350 APLP2Q06481 763 aa13.86□□□□□ -0.19
LINC00645-201ENST00000555350 FOXD4L1Q9NU39 408 aa13.85□□□□□ -0.19
LINC00645-201ENST00000555350 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
LINC00645-201ENST00000555350 ZBTB22O15209 634 aa13.77□□□□□ -0.21
LINC00645-201ENST00000555350 ABCB7O75027 752 aa13.76□□□□□ -0.21
LINC00645-201ENST00000555350 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
LINC00645-201ENST00000555350 POLA2Q14181 598 aa13.51□□□□□ -0.25
LINC00645-201ENST00000555350 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
LINC00645-201ENST00000555350 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
LINC00645-201ENST00000555350 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
LINC00645-201ENST00000555350 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
LINC00645-201ENST00000555350 RBM42Q9BTD8 480 aaKnown RBP13.2□□□□□ -0.3
LINC00645-201ENST00000555350 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
LINC00645-201ENST00000555350 FBLN2P98095 1184 aa12.99□□□□□ -0.33
LINC00645-201ENST00000555350 POTEHQ6S545 545 aa12.99□□□□□ -0.33
LINC00645-201ENST00000555350 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
LINC00645-201ENST00000555350 AKT1S1Q96B36 256 aa12.95□□□□□ -0.34
LINC00645-201ENST00000555350 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
LINC00645-201ENST00000555350 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
LINC00645-201ENST00000555350 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
LINC00645-201ENST00000555350 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
LINC00645-201ENST00000555350 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
LINC00645-201ENST00000555350 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
LINC00645-201ENST00000555350 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
LINC00645-201ENST00000555350 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.37
LINC00645-201ENST00000555350 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
LINC00645-201ENST00000555350 FXR2P51116 673 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC00645-201ENST00000555350 SPDYE1Q8NFV5 336 aaPredicted RBP12.57□□□□□ -0.4
LINC00645-201ENST00000555350 PABPN1Q86U42 306 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC00645-201ENST00000555350 CLEC11AQ9Y240 323 aa12.56□□□□□ -0.4
LINC00645-201ENST00000555350 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
LINC00645-201ENST00000555350 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
LINC00645-201ENST00000555350 PRR29P0C7W0 189 aa12.35□□□□□ -0.43
LINC00645-201ENST00000555350 CHADLQ6NUI6 762 aa12.33□□□□□ -0.44
LINC00645-201ENST00000555350 HAX1O00165 279 aa12.32□□□□□ -0.44
LINC00645-201ENST00000555350 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
LINC00645-201ENST00000555350 EVX2Q03828 476 aa12.23□□□□□ -0.45
LINC00645-201ENST00000555350 STAG3Q9UJ98 1225 aa12.19□□□□□ -0.46
LINC00645-201ENST00000555350 C19orf67A6NJJ6 358 aa12.16□□□□□ -0.46
LINC00645-201ENST00000555350 PROM2Q8N271 834 aa12.16□□□□□ -0.46
LINC00645-201ENST00000555350 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
LINC00645-201ENST00000555350 FARP1Q9Y4F1 1045 aaPredicted RBP12.13□□□□□ -0.47
LINC00645-201ENST00000555350 FKBP8Q14318 412 aa12.04□□□□□ -0.48
LINC00645-201ENST00000555350 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
LINC00645-201ENST00000555350 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
LINC00645-201ENST00000555350 GABBR2O75899 941 aa11.93□□□□□ -0.5
LINC00645-201ENST00000555350 ZRANB1Q9UGI0 708 aa11.88□□□□□ -0.51
LINC00645-201ENST00000555350 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC00645-201ENST00000555350 ZNF579Q8NAF0 562 aaKnown RBP11.84□□□□□ -0.51
LINC00645-201ENST00000555350 MIER1Q8N108 512 aa11.82□□□□□ -0.52
LINC00645-201ENST00000555350 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
LINC00645-201ENST00000555350 PHF12Q96QT6 1004 aa11.77□□□□□ -0.53
LINC00645-201ENST00000555350 PLEKHG5O94827 1062 aa11.76□□□□□ -0.53
LINC00645-201ENST00000555350 PLCD3Q8N3E9 789 aa11.76□□□□□ -0.53
LINC00645-201ENST00000555350 GALR2O43603 387 aaPredicted RBP11.71□□□□□ -0.53
LINC00645-201ENST00000555350 POTEIP0CG38 1075 aa11.71□□□□□ -0.53
LINC00645-201ENST00000555350 CLCN6P51797 869 aa11.71□□□□□ -0.53
LINC00645-201ENST00000555350 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
LINC00645-201ENST00000555350 RASEFQ8IZ41 740 aa11.67□□□□□ -0.54
LINC00645-201ENST00000555350 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
LINC00645-201ENST00000555350 DCBLD2Q96PD2 775 aa11.64□□□□□ -0.55
LINC00645-201ENST00000555350 CCDC61Q9Y6R9 512 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms