RNA–Protein interactions for RNA: ENST00000555131.1

PAPOLA-212, Transcript of poly(A) polymerase alpha, humanhuman

TSL 3

Gene PAPOLA, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-212ENST00000555131 AEBP2Q6ZN18 517 aaPredicted RBP24.72■■□□□ 1.55
PAPOLA-212ENST00000555131 CHIC1Q5VXU3 224 aa23.62■■□□□ 1.37
PAPOLA-212ENST00000555131 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
PAPOLA-212ENST00000555131 PHF23Q9BUL5 403 aaPredicted RBP20.85■□□□□ 0.93
PAPOLA-212ENST00000555131 FOXD1Q16676 465 aa19.63■□□□□ 0.73
PAPOLA-212ENST00000555131 PLPPR3Q6T4P5 718 aa18.97■□□□□ 0.63
PAPOLA-212ENST00000555131 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
PAPOLA-212ENST00000555131 ADRA2BP18089 450 aa18.44■□□□□ 0.54
PAPOLA-212ENST00000555131 PIAS4Q8N2W9 510 aaPredicted RBP18.44■□□□□ 0.54
PAPOLA-212ENST00000555131 MSH5O43196 834 aa18.35■□□□□ 0.53
PAPOLA-212ENST00000555131 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
PAPOLA-212ENST00000555131 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
PAPOLA-212ENST00000555131 MAPK8IP2Q13387 824 aaPredicted RBP16.89■□□□□ 0.29
PAPOLA-212ENST00000555131 DMRT2Q9Y5R5 561 aa16.73■□□□□ 0.27
PAPOLA-212ENST00000555131 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
PAPOLA-212ENST00000555131 CNKSR2Q8WXI2 1034 aa16.3■□□□□ 0.2
PAPOLA-212ENST00000555131 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
PAPOLA-212ENST00000555131 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
PAPOLA-212ENST00000555131 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
PAPOLA-212ENST00000555131 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
PAPOLA-212ENST00000555131 NPM3O75607 178 aaKnown RBP15.8■□□□□ 0.12
PAPOLA-212ENST00000555131 CACNB1Q02641 598 aaPredicted RBP15.71■□□□□ 0.11
PAPOLA-212ENST00000555131 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
PAPOLA-212ENST00000555131 KCNA4P22459 653 aa15.63■□□□□ 0.09
PAPOLA-212ENST00000555131 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
PAPOLA-212ENST00000555131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.5■□□□□ 0.07
PAPOLA-212ENST00000555131 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
PAPOLA-212ENST00000555131 U3KPZ7 1027 aaPredicted RBP15.12■□□□□ 0.01
PAPOLA-212ENST00000555131 SLC4A2P04920 1241 aa15.03■□□□□ -0
PAPOLA-212ENST00000555131 CAPN15O75808 1086 aa14.9□□□□□ -0.02
PAPOLA-212ENST00000555131 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
PAPOLA-212ENST00000555131 SLC4A1APQ9BWU0 796 aaKnown RBP14.82□□□□□ -0.04
PAPOLA-212ENST00000555131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.78□□□□□ -0.04
PAPOLA-212ENST00000555131 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
PAPOLA-212ENST00000555131 APLP2Q06481 763 aa14.77□□□□□ -0.05
PAPOLA-212ENST00000555131 TRHP20396 242 aaPredicted RBP14.7□□□□□ -0.06
PAPOLA-212ENST00000555131 DSG3P32926 999 aa14.7□□□□□ -0.06
PAPOLA-212ENST00000555131 SAMD1Q6SPF0 538 aaPredicted RBP14.69□□□□□ -0.06
PAPOLA-212ENST00000555131 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
PAPOLA-212ENST00000555131 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
PAPOLA-212ENST00000555131 ABCB7O75027 752 aa14.56□□□□□ -0.08
PAPOLA-212ENST00000555131 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
PAPOLA-212ENST00000555131 ZBTB22O15209 634 aa14.34□□□□□ -0.11
PAPOLA-212ENST00000555131 POLA2Q14181 598 aa14.3□□□□□ -0.12
PAPOLA-212ENST00000555131 ATF5Q9Y2D1 282 aaPredicted RBP14.25□□□□□ -0.13
PAPOLA-212ENST00000555131 RBM42Q9BTD8 480 aaKnown RBP14.07□□□□□ -0.16
PAPOLA-212ENST00000555131 ATXN8OSP0DMR3 200 aa14.06□□□□□ -0.16
PAPOLA-212ENST00000555131 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
PAPOLA-212ENST00000555131 POTEHQ6S545 545 aa13.89□□□□□ -0.19
PAPOLA-212ENST00000555131 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
PAPOLA-212ENST00000555131 CSRNP3Q8WYN3 585 aa13.81□□□□□ -0.2
PAPOLA-212ENST00000555131 EHMT2Q96KQ7 1210 aa13.81□□□□□ -0.2
PAPOLA-212ENST00000555131 FBLN2P98095 1184 aa13.76□□□□□ -0.21
PAPOLA-212ENST00000555131 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
PAPOLA-212ENST00000555131 CHRDL2Q6WN34 429 aa13.69□□□□□ -0.22
PAPOLA-212ENST00000555131 REM2Q8IYK8 340 aaPredicted RBP13.62□□□□□ -0.23
PAPOLA-212ENST00000555131 MKRN4PQ13434 485 aaPredicted RBP13.59□□□□□ -0.23
PAPOLA-212ENST00000555131 SPDYE2BA6NHP3 402 aa13.58□□□□□ -0.24
PAPOLA-212ENST00000555131 SPDYE6P0CI01 402 aa13.58□□□□□ -0.24
PAPOLA-212ENST00000555131 SPDYE2Q495Y8 402 aa13.58□□□□□ -0.24
PAPOLA-212ENST00000555131 PITPNM1O00562 1244 aa13.48□□□□□ -0.25
PAPOLA-212ENST00000555131 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
PAPOLA-212ENST00000555131 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
PAPOLA-212ENST00000555131 SSUH2Q9Y2M2 353 aa13.38□□□□□ -0.27
PAPOLA-212ENST00000555131 CLEC11AQ9Y240 323 aa13.36□□□□□ -0.27
PAPOLA-212ENST00000555131 SPDYE1Q8NFV5 336 aaPredicted RBP13.33□□□□□ -0.28
PAPOLA-212ENST00000555131 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
PAPOLA-212ENST00000555131 PABPN1Q86U42 306 aaKnown RBP eCLIP13.27□□□□□ -0.29
PAPOLA-212ENST00000555131 HAX1O00165 279 aa13.16□□□□□ -0.3
PAPOLA-212ENST00000555131 PRKAR2AP13861 404 aaKnown RBP13.16□□□□□ -0.3
PAPOLA-212ENST00000555131 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
PAPOLA-212ENST00000555131 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
PAPOLA-212ENST00000555131 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
PAPOLA-212ENST00000555131 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
PAPOLA-212ENST00000555131 STAG3Q9UJ98 1225 aa12.94□□□□□ -0.34
PAPOLA-212ENST00000555131 EVX2Q03828 476 aa12.93□□□□□ -0.34
PAPOLA-212ENST00000555131 C19orf67A6NJJ6 358 aa12.88□□□□□ -0.35
PAPOLA-212ENST00000555131 FARP1Q9Y4F1 1045 aaPredicted RBP12.84□□□□□ -0.35
PAPOLA-212ENST00000555131 CREBZFQ9NS37 354 aa12.77□□□□□ -0.37
PAPOLA-212ENST00000555131 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
PAPOLA-212ENST00000555131 GABBR2O75899 941 aa12.68□□□□□ -0.38
PAPOLA-212ENST00000555131 PROM2Q8N271 834 aa12.68□□□□□ -0.38
PAPOLA-212ENST00000555131 ZRANB1Q9UGI0 708 aa12.61□□□□□ -0.39
PAPOLA-212ENST00000555131 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
PAPOLA-212ENST00000555131 FKBP8Q14318 412 aa12.59□□□□□ -0.39
PAPOLA-212ENST00000555131 PAK3O75914 559 aaPredicted RBP12.57□□□□□ -0.4
PAPOLA-212ENST00000555131 MNX1P50219 401 aaPredicted RBP12.53□□□□□ -0.4
PAPOLA-212ENST00000555131 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.41
PAPOLA-212ENST00000555131 PLEKHG5O94827 1062 aa12.51□□□□□ -0.41
PAPOLA-212ENST00000555131 CLCN6P51797 869 aa12.51□□□□□ -0.41
PAPOLA-212ENST00000555131 MIER1Q8N108 512 aa12.5□□□□□ -0.41
PAPOLA-212ENST00000555131 PLCD3Q8N3E9 789 aa12.44□□□□□ -0.42
PAPOLA-212ENST00000555131 PHF12Q96QT6 1004 aa12.43□□□□□ -0.42
PAPOLA-212ENST00000555131 DCBLD2Q96PD2 775 aa12.42□□□□□ -0.42
PAPOLA-212ENST00000555131 TSPYL2Q9H2G4 693 aaPredicted RBP12.4□□□□□ -0.42
PAPOLA-212ENST00000555131 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
PAPOLA-212ENST00000555131 POTEIP0CG38 1075 aa12.37□□□□□ -0.43
PAPOLA-212ENST00000555131 ZBTB47Q9UFB7 747 aaPredicted RBP12.31□□□□□ -0.44
PAPOLA-212ENST00000555131 LHX8Q68G74 356 aa12.29□□□□□ -0.44
PAPOLA-212ENST00000555131 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms