RNA–Protein interactions for RNA: ENST00000555014.1

HIF1A-207, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-207ENST00000555014 AEBP2Q6ZN18 517 aaPredicted RBP25.18■■□□□ 1.62
HIF1A-207ENST00000555014 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
HIF1A-207ENST00000555014 SENP3Q9H4L4 574 aaPredicted RBP21.48■■□□□ 1.03
HIF1A-207ENST00000555014 PHF23Q9BUL5 403 aaPredicted RBP21.2■□□□□ 0.98
HIF1A-207ENST00000555014 FOXD1Q16676 465 aa20.07■□□□□ 0.8
HIF1A-207ENST00000555014 PLPPR3Q6T4P5 718 aa18.91■□□□□ 0.62
HIF1A-207ENST00000555014 MSH5O43196 834 aa18.81■□□□□ 0.6
HIF1A-207ENST00000555014 PIAS4Q8N2W9 510 aaPredicted RBP18.73■□□□□ 0.59
HIF1A-207ENST00000555014 PPP6R1Q9UPN7 881 aa18.65■□□□□ 0.58
HIF1A-207ENST00000555014 POTEDQ86YR6 584 aa18.63■□□□□ 0.57
HIF1A-207ENST00000555014 ADRA2BP18089 450 aa18.6■□□□□ 0.57
HIF1A-207ENST00000555014 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
HIF1A-207ENST00000555014 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
HIF1A-207ENST00000555014 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
HIF1A-207ENST00000555014 PPP4R3CPQ6ZMV5 832 aa16.58■□□□□ 0.24
HIF1A-207ENST00000555014 DCAF8L1A6NGE4 600 aa16.39■□□□□ 0.21
HIF1A-207ENST00000555014 HOXD11P31277 338 aaPredicted RBP16.32■□□□□ 0.2
HIF1A-207ENST00000555014 CNKSR2Q8WXI2 1034 aa16.28■□□□□ 0.2
HIF1A-207ENST00000555014 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
HIF1A-207ENST00000555014 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
HIF1A-207ENST00000555014 RNF39Q9H2S5 420 aa16.03■□□□□ 0.16
HIF1A-207ENST00000555014 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
HIF1A-207ENST00000555014 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
HIF1A-207ENST00000555014 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
HIF1A-207ENST00000555014 NPM3O75607 178 aaKnown RBP15.67■□□□□ 0.1
HIF1A-207ENST00000555014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.087e-7■■□□□ 13.6
HIF1A-207ENST00000555014 KCNA4P22459 653 aa15.25■□□□□ 0.03
HIF1A-207ENST00000555014 U3KPZ7 1027 aaPredicted RBP15.24■□□□□ 0.03
HIF1A-207ENST00000555014 SPINK5Q9NQ38 1064 aaPredicted RBP15.08■□□□□ 0
HIF1A-207ENST00000555014 CAPN15O75808 1086 aa15.07■□□□□ 0
HIF1A-207ENST00000555014 SLC4A2P04920 1241 aa15□□□□□ -0.01
HIF1A-207ENST00000555014 DSG3P32926 999 aa14.98□□□□□ -0.01
HIF1A-207ENST00000555014 TRHP20396 242 aaPredicted RBP14.8□□□□□ -0.04
HIF1A-207ENST00000555014 APLP2Q06481 763 aa14.76□□□□□ -0.05
HIF1A-207ENST00000555014 ABCB7O75027 752 aa14.72□□□□□ -0.05
HIF1A-207ENST00000555014 ZNF219Q9P2Y4 722 aaPredicted RBP14.72□□□□□ -0.05
HIF1A-207ENST00000555014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.71□□□□□ -0.05
HIF1A-207ENST00000555014 HNRNPUL2Q1KMD3 747 aaKnown RBP14.71□□□□□ -0.05
HIF1A-207ENST00000555014 SAMD1Q6SPF0 538 aaPredicted RBP14.63□□□□□ -0.07
HIF1A-207ENST00000555014 POTEHQ6S545 545 aa14.57□□□□□ -0.08
HIF1A-207ENST00000555014 MYCNP04198 464 aaPredicted RBP14.48□□□□□ -0.09
HIF1A-207ENST00000555014 SLC4A1APQ9BWU0 796 aaKnown RBP14.36□□□□□ -0.11
HIF1A-207ENST00000555014 POLA2Q14181 598 aa14.34□□□□□ -0.11
HIF1A-207ENST00000555014 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
HIF1A-207ENST00000555014 FOXD4L1Q9NU39 408 aa14.25□□□□□ -0.13
HIF1A-207ENST00000555014 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
HIF1A-207ENST00000555014 CHRDL2Q6WN34 429 aa14.05□□□□□ -0.16
HIF1A-207ENST00000555014 ZBTB22O15209 634 aa14.01□□□□□ -0.17
HIF1A-207ENST00000555014 ZBTB12Q9Y330 459 aaPredicted RBP14□□□□□ -0.17
HIF1A-207ENST00000555014 AKT1S1Q96B36 256 aa13.92□□□□□ -0.18
HIF1A-207ENST00000555014 OSCARQ8IYS5 282 aa13.9□□□□□ -0.18
HIF1A-207ENST00000555014 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
HIF1A-207ENST00000555014 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
HIF1A-207ENST00000555014 PITPNM1O00562 1244 aa13.68□□□□□ -0.22
HIF1A-207ENST00000555014 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
HIF1A-207ENST00000555014 FBLN2P98095 1184 aa13.63□□□□□ -0.23
HIF1A-207ENST00000555014 SP7Q8TDD2 431 aaPredicted RBP13.58□□□□□ -0.24
HIF1A-207ENST00000555014 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
HIF1A-207ENST00000555014 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
HIF1A-207ENST00000555014 FXR2P51116 673 aaKnown RBP eCLIP13.56□□□□□ -0.244e-8■■□□□ 11.4
HIF1A-207ENST00000555014 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
HIF1A-207ENST00000555014 MKRN4PQ13434 485 aaPredicted RBP13.51□□□□□ -0.25
HIF1A-207ENST00000555014 HAX1O00165 279 aa13.49□□□□□ -0.25
HIF1A-207ENST00000555014 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
HIF1A-207ENST00000555014 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
HIF1A-207ENST00000555014 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
HIF1A-207ENST00000555014 SSUH2Q9Y2M2 353 aa13.36□□□□□ -0.27
HIF1A-207ENST00000555014 PRKAR2AP13861 404 aaKnown RBP13.33□□□□□ -0.28
HIF1A-207ENST00000555014 EVX2Q03828 476 aa13.32□□□□□ -0.28
HIF1A-207ENST00000555014 CSRNP3Q8WYN3 585 aa13.23□□□□□ -0.29
HIF1A-207ENST00000555014 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
HIF1A-207ENST00000555014 CHADLQ6NUI6 762 aa13.17□□□□□ -0.3
HIF1A-207ENST00000555014 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
HIF1A-207ENST00000555014 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
HIF1A-207ENST00000555014 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.33
HIF1A-207ENST00000555014 GABBR2O75899 941 aa13□□□□□ -0.33
HIF1A-207ENST00000555014 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
HIF1A-207ENST00000555014 CD44P16070 742 aaKnown RBP12.9□□□□□ -0.34
HIF1A-207ENST00000555014 SPDYE4A6NLX3 237 aa12.81□□□□□ -0.36
HIF1A-207ENST00000555014 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
HIF1A-207ENST00000555014 CREBZFQ9NS37 354 aa12.77□□□□□ -0.37
HIF1A-207ENST00000555014 LHX8Q68G74 356 aa12.75□□□□□ -0.37
HIF1A-207ENST00000555014 POTEIP0CG38 1075 aa12.73□□□□□ -0.37
HIF1A-207ENST00000555014 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
HIF1A-207ENST00000555014 CLCN6P51797 869 aa12.67□□□□□ -0.38
HIF1A-207ENST00000555014 ZNF579Q8NAF0 562 aaKnown RBP12.66□□□□□ -0.38
HIF1A-207ENST00000555014 DCBLD2Q96PD2 775 aa12.62□□□□□ -0.39
HIF1A-207ENST00000555014 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
HIF1A-207ENST00000555014 PAK3O75914 559 aaPredicted RBP12.55□□□□□ -0.4
HIF1A-207ENST00000555014 NPM1P06748 294 aaKnown RBP eCLIP12.52□□□□□ -0.41
HIF1A-207ENST00000555014 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
HIF1A-207ENST00000555014 PHF12Q96QT6 1004 aa12.52□□□□□ -0.41
HIF1A-207ENST00000555014 PROM2Q8N271 834 aa12.42□□□□□ -0.42
HIF1A-207ENST00000555014 MS4A3Q96HJ5 214 aa12.34□□□□□ -0.43
HIF1A-207ENST00000555014 TSPYL2Q9H2G4 693 aaPredicted RBP12.34□□□□□ -0.43
HIF1A-207ENST00000555014 PELP1Q8IZL8 1130 aaKnown RBP12.32□□□□□ -0.44
HIF1A-207ENST00000555014 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
HIF1A-207ENST00000555014 OTUD5Q96G74 571 aa12.27□□□□□ -0.45
HIF1A-207ENST00000555014 ASTLQ6HA08 431 aaPredicted RBP12.25□□□□□ -0.45
HIF1A-207ENST00000555014 CCDC61Q9Y6R9 512 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms