RNA–Protein interactions for RNA: ENST00000554675.1

TMEM229B-204, Transcript of transmembrane protein 229B, humanhuman

TSL 2

Gene TMEM229B, Length 459 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM229B-204ENST00000554675 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
TMEM229B-204ENST00000554675 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
TMEM229B-204ENST00000554675 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
TMEM229B-204ENST00000554675 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
TMEM229B-204ENST00000554675 PLPPR3Q6T4P5 718 aa19.34■□□□□ 0.69
TMEM229B-204ENST00000554675 FOXD1Q16676 465 aa18.19■□□□□ 0.5
TMEM229B-204ENST00000554675 ADRA2BP18089 450 aa17.93■□□□□ 0.46
TMEM229B-204ENST00000554675 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
TMEM229B-204ENST00000554675 PIAS4Q8N2W9 510 aaPredicted RBP17.37■□□□□ 0.37
TMEM229B-204ENST00000554675 KCNA4P22459 653 aa17.23■□□□□ 0.35
TMEM229B-204ENST00000554675 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
TMEM229B-204ENST00000554675 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
TMEM229B-204ENST00000554675 MSH5O43196 834 aa16.73■□□□□ 0.27
TMEM229B-204ENST00000554675 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
TMEM229B-204ENST00000554675 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
TMEM229B-204ENST00000554675 SLC4A1APQ9BWU0 796 aaKnown RBP16.61■□□□□ 0.25
TMEM229B-204ENST00000554675 CNKSR2Q8WXI2 1034 aa16.5■□□□□ 0.23
TMEM229B-204ENST00000554675 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
TMEM229B-204ENST00000554675 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
TMEM229B-204ENST00000554675 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
TMEM229B-204ENST00000554675 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
TMEM229B-204ENST00000554675 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
TMEM229B-204ENST00000554675 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
TMEM229B-204ENST00000554675 FOXD4L1Q9NU39 408 aa15.81■□□□□ 0.12
TMEM229B-204ENST00000554675 ZBTB22O15209 634 aa15.8■□□□□ 0.12
TMEM229B-204ENST00000554675 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
TMEM229B-204ENST00000554675 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
TMEM229B-204ENST00000554675 MYCNP04198 464 aaPredicted RBP15.34■□□□□ 0.05
TMEM229B-204ENST00000554675 ATXN8OSP0DMR3 200 aa15.3■□□□□ 0.04
TMEM229B-204ENST00000554675 DCAF8L1A6NGE4 600 aa15.14■□□□□ 0.01
TMEM229B-204ENST00000554675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.07■□□□□ 0
TMEM229B-204ENST00000554675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
TMEM229B-204ENST00000554675 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
TMEM229B-204ENST00000554675 SAMD1Q6SPF0 538 aaPredicted RBP14.97□□□□□ -0.01
TMEM229B-204ENST00000554675 APLP2Q06481 763 aa14.81□□□□□ -0.04
TMEM229B-204ENST00000554675 U3KPZ7 1027 aaPredicted RBP14.8□□□□□ -0.04
TMEM229B-204ENST00000554675 FKBP8Q14318 412 aa14.71□□□□□ -0.05
TMEM229B-204ENST00000554675 ATF5Q9Y2D1 282 aaPredicted RBP14.66□□□□□ -0.06
TMEM229B-204ENST00000554675 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
TMEM229B-204ENST00000554675 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
TMEM229B-204ENST00000554675 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
TMEM229B-204ENST00000554675 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
TMEM229B-204ENST00000554675 FBLN2P98095 1184 aa14.27□□□□□ -0.13
TMEM229B-204ENST00000554675 C1QBPQ07021 282 aaKnown RBP14.25□□□□□ -0.13
TMEM229B-204ENST00000554675 POTEDQ86YR6 584 aa14.24□□□□□ -0.13
TMEM229B-204ENST00000554675 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
TMEM229B-204ENST00000554675 FBXO3Q9UK99 471 aa14.21□□□□□ -0.13
TMEM229B-204ENST00000554675 SPDYE4A6NLX3 237 aa14.19□□□□□ -0.14
TMEM229B-204ENST00000554675 CAPN15O75808 1086 aa14.19□□□□□ -0.14
TMEM229B-204ENST00000554675 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
TMEM229B-204ENST00000554675 ZBTB12Q9Y330 459 aaPredicted RBP14.15□□□□□ -0.14
TMEM229B-204ENST00000554675 POLA2Q14181 598 aa14.14□□□□□ -0.15
TMEM229B-204ENST00000554675 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
TMEM229B-204ENST00000554675 SLC24A1O60721 1099 aa14.02□□□□□ -0.17
TMEM229B-204ENST00000554675 PROM2Q8N271 834 aa14.02□□□□□ -0.17
TMEM229B-204ENST00000554675 ABCB7O75027 752 aa13.89□□□□□ -0.19
TMEM229B-204ENST00000554675 VASPP50552 380 aaPredicted RBP13.87□□□□□ -0.19
TMEM229B-204ENST00000554675 DSG3P32926 999 aa13.77□□□□□ -0.21
TMEM229B-204ENST00000554675 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
TMEM229B-204ENST00000554675 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
TMEM229B-204ENST00000554675 SPDYE2Q495Y8 402 aa13.73□□□□□ -0.21
TMEM229B-204ENST00000554675 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.21
TMEM229B-204ENST00000554675 STAG3Q9UJ98 1225 aa13.67□□□□□ -0.22
TMEM229B-204ENST00000554675 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
TMEM229B-204ENST00000554675 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
TMEM229B-204ENST00000554675 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
TMEM229B-204ENST00000554675 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
TMEM229B-204ENST00000554675 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.25
TMEM229B-204ENST00000554675 PABPN1Q86U42 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
TMEM229B-204ENST00000554675 SPOCK2Q92563 424 aa13.51□□□□□ -0.25
TMEM229B-204ENST00000554675 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
TMEM229B-204ENST00000554675 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
TMEM229B-204ENST00000554675 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
TMEM229B-204ENST00000554675 ZBTB47Q9UFB7 747 aaPredicted RBP13.43□□□□□ -0.26
TMEM229B-204ENST00000554675 PKD2Q13563 968 aa13.4□□□□□ -0.26
TMEM229B-204ENST00000554675 MIER1Q8N108 512 aa13.4□□□□□ -0.26
TMEM229B-204ENST00000554675 PLCB2Q00722 1185 aa13.37□□□□□ -0.27
TMEM229B-204ENST00000554675 ECM2O94769 699 aaPredicted RBP13.31□□□□□ -0.28
TMEM229B-204ENST00000554675 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
TMEM229B-204ENST00000554675 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
TMEM229B-204ENST00000554675 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.21□□□□□ -0.29
TMEM229B-204ENST00000554675 SPDYE1Q8NFV5 336 aaPredicted RBP13.19□□□□□ -0.3
TMEM229B-204ENST00000554675 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
TMEM229B-204ENST00000554675 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
TMEM229B-204ENST00000554675 HAP1P54257 671 aaPredicted RBP13.15□□□□□ -0.3
TMEM229B-204ENST00000554675 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.3
TMEM229B-204ENST00000554675 GSE1Q14687 1217 aa13.1□□□□□ -0.31
TMEM229B-204ENST00000554675 RGL2O15211 777 aa13.07□□□□□ -0.32
TMEM229B-204ENST00000554675 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
TMEM229B-204ENST00000554675 PRR29P0C7W0 189 aa13.03□□□□□ -0.32
TMEM229B-204ENST00000554675 TAOK2Q9UL54 1235 aa13.03□□□□□ -0.32
TMEM229B-204ENST00000554675 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
TMEM229B-204ENST00000554675 PAXIP1Q6ZW49 1069 aaPredicted RBP12.97□□□□□ -0.33
TMEM229B-204ENST00000554675 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
TMEM229B-204ENST00000554675 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
TMEM229B-204ENST00000554675 SPRYD3Q8NCJ5 442 aa12.96□□□□□ -0.33
TMEM229B-204ENST00000554675 FAM212AQ96EL1 285 aa12.95□□□□□ -0.34
TMEM229B-204ENST00000554675 CHGAP10645 457 aaKnown RBP12.94□□□□□ -0.34
TMEM229B-204ENST00000554675 NUBP1P53384 320 aa12.94□□□□□ -0.34
TMEM229B-204ENST00000554675 CFAP44Q96MT7 982 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms