RNA–Protein interactions for RNA: ENST00000554555.1

TTC6-208, Transcript of tetratricopeptide repeat domain 6, humanhuman

TSL 3

Gene TTC6, Length 535 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC6-208ENST00000554555 AEBP2Q6ZN18 517 aaPredicted RBP24.44■■□□□ 1.5
TTC6-208ENST00000554555 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
TTC6-208ENST00000554555 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
TTC6-208ENST00000554555 PHF23Q9BUL5 403 aaPredicted RBP20.48■□□□□ 0.87
TTC6-208ENST00000554555 FOXD1Q16676 465 aa19.44■□□□□ 0.7
TTC6-208ENST00000554555 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
TTC6-208ENST00000554555 MSH5O43196 834 aa18.17■□□□□ 0.5
TTC6-208ENST00000554555 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
TTC6-208ENST00000554555 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
TTC6-208ENST00000554555 PIAS4Q8N2W9 510 aaPredicted RBP18.04■□□□□ 0.48
TTC6-208ENST00000554555 ADRA2BP18089 450 aa17.95■□□□□ 0.46
TTC6-208ENST00000554555 MAPK8IP2Q13387 824 aaPredicted RBP16.57■□□□□ 0.24
TTC6-208ENST00000554555 DMRT2Q9Y5R5 561 aa16.46■□□□□ 0.23
TTC6-208ENST00000554555 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
TTC6-208ENST00000554555 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
TTC6-208ENST00000554555 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
TTC6-208ENST00000554555 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
TTC6-208ENST00000554555 DCAF8L1A6NGE4 600 aa15.7■□□□□ 0.1
TTC6-208ENST00000554555 CNKSR2Q8WXI2 1034 aa15.64■□□□□ 0.09
TTC6-208ENST00000554555 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
TTC6-208ENST00000554555 RNF39Q9H2S5 420 aa15.56■□□□□ 0.08
TTC6-208ENST00000554555 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
TTC6-208ENST00000554555 KCNA4P22459 653 aa15.35■□□□□ 0.05
TTC6-208ENST00000554555 NPM3O75607 178 aaKnown RBP15.31■□□□□ 0.04
TTC6-208ENST00000554555 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
TTC6-208ENST00000554555 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
TTC6-208ENST00000554555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.95□□□□□ -0.02
TTC6-208ENST00000554555 U3KPZ7 1027 aaPredicted RBP14.72□□□□□ -0.05
TTC6-208ENST00000554555 SLC4A2P04920 1241 aa14.59□□□□□ -0.07
TTC6-208ENST00000554555 SPINK5Q9NQ38 1064 aaPredicted RBP14.57□□□□□ -0.08
TTC6-208ENST00000554555 DSG3P32926 999 aa14.5□□□□□ -0.09
TTC6-208ENST00000554555 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
TTC6-208ENST00000554555 CAPN15O75808 1086 aa14.46□□□□□ -0.09
TTC6-208ENST00000554555 ZBTB22O15209 634 aa14.19□□□□□ -0.14
TTC6-208ENST00000554555 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
TTC6-208ENST00000554555 ABCB7O75027 752 aa14.16□□□□□ -0.14
TTC6-208ENST00000554555 POTEHQ6S545 545 aa14.16□□□□□ -0.14
TTC6-208ENST00000554555 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
TTC6-208ENST00000554555 ZNF219Q9P2Y4 722 aaPredicted RBP14.13□□□□□ -0.15
TTC6-208ENST00000554555 APLP2Q06481 763 aa14.09□□□□□ -0.15
TTC6-208ENST00000554555 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
TTC6-208ENST00000554555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.07□□□□□ -0.16
TTC6-208ENST00000554555 HNRNPUL2Q1KMD3 747 aaKnown RBP14.07□□□□□ -0.16
TTC6-208ENST00000554555 SAMD1Q6SPF0 538 aaPredicted RBP14.02□□□□□ -0.17
TTC6-208ENST00000554555 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
TTC6-208ENST00000554555 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
TTC6-208ENST00000554555 POLA2Q14181 598 aa13.78□□□□□ -0.2
TTC6-208ENST00000554555 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
TTC6-208ENST00000554555 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
TTC6-208ENST00000554555 ATXN8OSP0DMR3 200 aa13.7□□□□□ -0.22
TTC6-208ENST00000554555 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
TTC6-208ENST00000554555 AKT1S1Q96B36 256 aa13.42□□□□□ -0.26
TTC6-208ENST00000554555 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
TTC6-208ENST00000554555 OSCARQ8IYS5 282 aa13.37□□□□□ -0.27
TTC6-208ENST00000554555 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
TTC6-208ENST00000554555 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
TTC6-208ENST00000554555 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
TTC6-208ENST00000554555 PITPNM1O00562 1244 aa13.21□□□□□ -0.29
TTC6-208ENST00000554555 SP7Q8TDD2 431 aaPredicted RBP13.18□□□□□ -0.3
TTC6-208ENST00000554555 FXR2P51116 673 aaKnown RBP eCLIP13.14□□□□□ -0.31
TTC6-208ENST00000554555 FBLN2P98095 1184 aa13.09□□□□□ -0.31
TTC6-208ENST00000554555 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
TTC6-208ENST00000554555 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
TTC6-208ENST00000554555 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
TTC6-208ENST00000554555 HAX1O00165 279 aa12.99□□□□□ -0.33
TTC6-208ENST00000554555 EVX2Q03828 476 aa12.96□□□□□ -0.33
TTC6-208ENST00000554555 SSUH2Q9Y2M2 353 aa12.9□□□□□ -0.34
TTC6-208ENST00000554555 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
TTC6-208ENST00000554555 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
TTC6-208ENST00000554555 PRKAR2AP13861 404 aaKnown RBP12.82□□□□□ -0.36
TTC6-208ENST00000554555 CLEC11AQ9Y240 323 aa12.82□□□□□ -0.36
TTC6-208ENST00000554555 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
TTC6-208ENST00000554555 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
TTC6-208ENST00000554555 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
TTC6-208ENST00000554555 CHADLQ6NUI6 762 aa12.67□□□□□ -0.38
TTC6-208ENST00000554555 GABBR2O75899 941 aa12.58□□□□□ -0.4
TTC6-208ENST00000554555 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
TTC6-208ENST00000554555 PROM2Q8N271 834 aa12.57□□□□□ -0.4
TTC6-208ENST00000554555 FARP1Q9Y4F1 1045 aaPredicted RBP12.44□□□□□ -0.42
TTC6-208ENST00000554555 FKBP8Q14318 412 aa12.41□□□□□ -0.42
TTC6-208ENST00000554555 CD44P16070 742 aaKnown RBP12.4□□□□□ -0.42
TTC6-208ENST00000554555 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
TTC6-208ENST00000554555 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
TTC6-208ENST00000554555 LHX8Q68G74 356 aa12.34□□□□□ -0.43
TTC6-208ENST00000554555 CREBZFQ9NS37 354 aa12.31□□□□□ -0.44
TTC6-208ENST00000554555 ZNF579Q8NAF0 562 aaKnown RBP12.23□□□□□ -0.45
TTC6-208ENST00000554555 MNX1P50219 401 aaPredicted RBP12.19□□□□□ -0.46
TTC6-208ENST00000554555 CLCN6P51797 869 aa12.19□□□□□ -0.46
TTC6-208ENST00000554555 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
TTC6-208ENST00000554555 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
TTC6-208ENST00000554555 DCBLD2Q96PD2 775 aa12.1□□□□□ -0.47
TTC6-208ENST00000554555 PHF12Q96QT6 1004 aa12.06□□□□□ -0.48
TTC6-208ENST00000554555 MIER1Q8N108 512 aa12.02□□□□□ -0.49
TTC6-208ENST00000554555 FBXO3Q9UK99 471 aa12□□□□□ -0.49
TTC6-208ENST00000554555 POTEB2H3BUK9 544 aa11.97□□□□□ -0.49
TTC6-208ENST00000554555 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
TTC6-208ENST00000554555 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
TTC6-208ENST00000554555 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
TTC6-208ENST00000554555 PLCD3Q8N3E9 789 aa11.93□□□□□ -0.5
TTC6-208ENST00000554555 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms