RNA–Protein interactions for RNA: ENST00000554498.1

SLC38A6-219, Transcript of solute carrier family 38 member 6, humanhuman

TSL 3

Gene SLC38A6, Length 470 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-219ENST00000554498 AEBP2Q6ZN18 517 aaPredicted RBP29.58■■■□□ 2.33
SLC38A6-219ENST00000554498 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
SLC38A6-219ENST00000554498 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
SLC38A6-219ENST00000554498 PHF23Q9BUL5 403 aaPredicted RBP24.96■■□□□ 1.59
SLC38A6-219ENST00000554498 FOXD1Q16676 465 aa23.67■■□□□ 1.38
SLC38A6-219ENST00000554498 POTEDQ86YR6 584 aa22.57■■□□□ 1.2
SLC38A6-219ENST00000554498 MSH5O43196 834 aa22.42■■□□□ 1.18
SLC38A6-219ENST00000554498 PIAS4Q8N2W9 510 aaPredicted RBP22.09■■□□□ 1.13
SLC38A6-219ENST00000554498 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
SLC38A6-219ENST00000554498 PPP6R1Q9UPN7 881 aa21.73■■□□□ 1.07
SLC38A6-219ENST00000554498 ADRA2BP18089 450 aa21.68■■□□□ 1.06
SLC38A6-219ENST00000554498 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
SLC38A6-219ENST00000554498 MAPK8IP2Q13387 824 aaPredicted RBP20.02■□□□□ 0.8
SLC38A6-219ENST00000554498 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
SLC38A6-219ENST00000554498 CACNB1Q02641 598 aaPredicted RBP19.51■□□□□ 0.71
SLC38A6-219ENST00000554498 DCAF8L1A6NGE4 600 aa19.33■□□□□ 0.68
SLC38A6-219ENST00000554498 PPP4R3CPQ6ZMV5 832 aa19.19■□□□□ 0.66
SLC38A6-219ENST00000554498 HOXD11P31277 338 aaPredicted RBP19.11■□□□□ 0.65
SLC38A6-219ENST00000554498 RNF39Q9H2S5 420 aa19.01■□□□□ 0.63
SLC38A6-219ENST00000554498 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
SLC38A6-219ENST00000554498 RNF216Q9NWF9 866 aaPredicted RBP18.88■□□□□ 0.61
SLC38A6-219ENST00000554498 C1QBPQ07021 282 aaKnown RBP18.76■□□□□ 0.59
SLC38A6-219ENST00000554498 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
SLC38A6-219ENST00000554498 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
SLC38A6-219ENST00000554498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.52
SLC38A6-219ENST00000554498 NPM3O75607 178 aaKnown RBP18.03■□□□□ 0.48
SLC38A6-219ENST00000554498 U3KPZ7 1027 aaPredicted RBP17.79■□□□□ 0.44
SLC38A6-219ENST00000554498 CAPN15O75808 1086 aa17.73■□□□□ 0.43
SLC38A6-219ENST00000554498 DSG3P32926 999 aa17.66■□□□□ 0.42
SLC38A6-219ENST00000554498 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
SLC38A6-219ENST00000554498 POTEHQ6S545 545 aa17.64■□□□□ 0.41
SLC38A6-219ENST00000554498 APLP2Q06481 763 aa17.39■□□□□ 0.37
SLC38A6-219ENST00000554498 TRHP20396 242 aaPredicted RBP17.33■□□□□ 0.36
SLC38A6-219ENST00000554498 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
SLC38A6-219ENST00000554498 ZNF219Q9P2Y4 722 aaPredicted RBP17.3■□□□□ 0.36
SLC38A6-219ENST00000554498 KCNA4P22459 653 aa17.28■□□□□ 0.36
SLC38A6-219ENST00000554498 ABCB7O75027 752 aa17.25■□□□□ 0.35
SLC38A6-219ENST00000554498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
SLC38A6-219ENST00000554498 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
SLC38A6-219ENST00000554498 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
SLC38A6-219ENST00000554498 RBM42Q9BTD8 480 aaKnown RBP16.96■□□□□ 0.31
SLC38A6-219ENST00000554498 MYCNP04198 464 aaPredicted RBP16.75■□□□□ 0.27
SLC38A6-219ENST00000554498 POLA2Q14181 598 aa16.72■□□□□ 0.27
SLC38A6-219ENST00000554498 CHRDL2Q6WN34 429 aa16.71■□□□□ 0.27
SLC38A6-219ENST00000554498 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
SLC38A6-219ENST00000554498 ZBTB12Q9Y330 459 aaPredicted RBP16.43■□□□□ 0.22
SLC38A6-219ENST00000554498 SP7Q8TDD2 431 aaPredicted RBP16.33■□□□□ 0.2
SLC38A6-219ENST00000554498 FOXD4L1Q9NU39 408 aa16.33■□□□□ 0.2
SLC38A6-219ENST00000554498 ATF5Q9Y2D1 282 aaPredicted RBP16.29■□□□□ 0.2
SLC38A6-219ENST00000554498 SLC4A1APQ9BWU0 796 aaKnown RBP16.27■□□□□ 0.2
SLC38A6-219ENST00000554498 REM2Q8IYK8 340 aaPredicted RBP16.24■□□□□ 0.19
SLC38A6-219ENST00000554498 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
SLC38A6-219ENST00000554498 PIP4P2Q8N4L2 257 aa16.19■□□□□ 0.18
SLC38A6-219ENST00000554498 PITPNM1O00562 1244 aa16.08■□□□□ 0.16
SLC38A6-219ENST00000554498 HAX1O00165 279 aa16.07■□□□□ 0.16
SLC38A6-219ENST00000554498 FXR2P51116 673 aaKnown RBP eCLIP16.02■□□□□ 0.16
SLC38A6-219ENST00000554498 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
SLC38A6-219ENST00000554498 SPDYE2BA6NHP3 402 aa15.84■□□□□ 0.13
SLC38A6-219ENST00000554498 SPDYE6P0CI01 402 aa15.84■□□□□ 0.13
SLC38A6-219ENST00000554498 SPDYE2Q495Y8 402 aa15.84■□□□□ 0.13
SLC38A6-219ENST00000554498 ZBTB22O15209 634 aa15.83■□□□□ 0.12
SLC38A6-219ENST00000554498 FBLN2P98095 1184 aa15.83■□□□□ 0.12
SLC38A6-219ENST00000554498 EVX2Q03828 476 aa15.72■□□□□ 0.11
SLC38A6-219ENST00000554498 CLEC11AQ9Y240 323 aa15.7■□□□□ 0.1
SLC38A6-219ENST00000554498 PRKAR2AP13861 404 aaKnown RBP15.69■□□□□ 0.1
SLC38A6-219ENST00000554498 SPDYE1Q8NFV5 336 aaPredicted RBP15.69■□□□□ 0.1
SLC38A6-219ENST00000554498 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
SLC38A6-219ENST00000554498 SSUH2Q9Y2M2 353 aa15.54■□□□□ 0.08
SLC38A6-219ENST00000554498 MKRN4PQ13434 485 aaPredicted RBP15.53■□□□□ 0.08
SLC38A6-219ENST00000554498 C19orf67A6NJJ6 358 aa15.52■□□□□ 0.08
SLC38A6-219ENST00000554498 GABBR2O75899 941 aa15.4■□□□□ 0.06
SLC38A6-219ENST00000554498 CHADLQ6NUI6 762 aa15.39■□□□□ 0.05
SLC38A6-219ENST00000554498 PRR29P0C7W0 189 aa15.36■□□□□ 0.05
SLC38A6-219ENST00000554498 PABPN1Q86U42 306 aaKnown RBP eCLIP15.32■□□□□ 0.04
SLC38A6-219ENST00000554498 LHX8Q68G74 356 aa15.3■□□□□ 0.04
SLC38A6-219ENST00000554498 CD44P16070 742 aaKnown RBP15.18■□□□□ 0.02
SLC38A6-219ENST00000554498 FARP1Q9Y4F1 1045 aaPredicted RBP15.12■□□□□ 0.01
SLC38A6-219ENST00000554498 CLCN6P51797 869 aa15.07■□□□□ 0
SLC38A6-219ENST00000554498 POTEIP0CG38 1075 aa15.02■□□□□ -0
SLC38A6-219ENST00000554498 DCBLD2Q96PD2 775 aa14.98□□□□□ -0.01
SLC38A6-219ENST00000554498 ZNF579Q8NAF0 562 aaKnown RBP14.9□□□□□ -0.02
SLC38A6-219ENST00000554498 ZRANB1Q9UGI0 708 aa14.89□□□□□ -0.03
SLC38A6-219ENST00000554498 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
SLC38A6-219ENST00000554498 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
SLC38A6-219ENST00000554498 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
SLC38A6-219ENST00000554498 CREBZFQ9NS37 354 aa14.81□□□□□ -0.04
SLC38A6-219ENST00000554498 PAK3O75914 559 aaPredicted RBP14.75□□□□□ -0.05
SLC38A6-219ENST00000554498 PLSCR2Q9NRY7 297 aa14.74□□□□□ -0.05
SLC38A6-219ENST00000554498 GALR2O43603 387 aaPredicted RBP14.73□□□□□ -0.05
SLC38A6-219ENST00000554498 SPDYE4A6NLX3 237 aa14.65□□□□□ -0.06
SLC38A6-219ENST00000554498 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
SLC38A6-219ENST00000554498 PHF12Q96QT6 1004 aa14.62□□□□□ -0.07
SLC38A6-219ENST00000554498 OTUD5Q96G74 571 aa14.58□□□□□ -0.08
SLC38A6-219ENST00000554498 POTEB2H3BUK9 544 aa14.52□□□□□ -0.09
SLC38A6-219ENST00000554498 POTEMA6NI47 508 aa14.45□□□□□ -0.1
SLC38A6-219ENST00000554498 MNX1P50219 401 aaPredicted RBP14.45□□□□□ -0.1
SLC38A6-219ENST00000554498 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
SLC38A6-219ENST00000554498 MS4A3Q96HJ5 214 aa14.42□□□□□ -0.1
SLC38A6-219ENST00000554498 METRNQ9UJH8 293 aa14.42□□□□□ -0.1
SLC38A6-219ENST00000554498 ASTLQ6HA08 431 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms