RNA–Protein interactions for RNA: ENST00000554424.1

TC2N-204, Transcript of tandem C2 domains, nuclear, humanhuman

TSL 2

Gene TC2N, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TC2N-204ENST00000554424 AEBP2Q6ZN18 517 aaPredicted RBP32.02■■■□□ 2.72
TC2N-204ENST00000554424 CHIC1Q5VXU3 224 aa29.99■■■□□ 2.39
TC2N-204ENST00000554424 SENP3Q9H4L4 574 aaPredicted RBP27.18■■□□□ 1.94
TC2N-204ENST00000554424 PHF23Q9BUL5 403 aaPredicted RBP26.85■■□□□ 1.89
TC2N-204ENST00000554424 FOXD1Q16676 465 aa25.49■■□□□ 1.67
TC2N-204ENST00000554424 POTEDQ86YR6 584 aa23.93■■□□□ 1.42
TC2N-204ENST00000554424 MSH5O43196 834 aa23.83■■□□□ 1.41
TC2N-204ENST00000554424 PLPPR3Q6T4P5 718 aa23.75■■□□□ 1.39
TC2N-204ENST00000554424 PIAS4Q8N2W9 510 aaPredicted RBP23.68■■□□□ 1.38
TC2N-204ENST00000554424 PPP6R1Q9UPN7 881 aa23.65■■□□□ 1.38
TC2N-204ENST00000554424 ADRA2BP18089 450 aa23.52■■□□□ 1.36
TC2N-204ENST00000554424 MAPK8IP2Q13387 824 aaPredicted RBP21.73■■□□□ 1.07
TC2N-204ENST00000554424 DMRT2Q9Y5R5 561 aa21.55■■□□□ 1.04
TC2N-204ENST00000554424 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
TC2N-204ENST00000554424 PPP4R3CPQ6ZMV5 832 aa20.83■□□□□ 0.93
TC2N-204ENST00000554424 CACNB1Q02641 598 aaPredicted RBP20.68■□□□□ 0.9
TC2N-204ENST00000554424 DCAF8L1A6NGE4 600 aa20.65■□□□□ 0.9
TC2N-204ENST00000554424 HOXD11P31277 338 aaPredicted RBP20.64■□□□□ 0.89
TC2N-204ENST00000554424 CNKSR2Q8WXI2 1034 aa20.46■□□□□ 0.87
TC2N-204ENST00000554424 RNF39Q9H2S5 420 aa20.41■□□□□ 0.86
TC2N-204ENST00000554424 RNF216Q9NWF9 866 aaPredicted RBP20.36■□□□□ 0.85
TC2N-204ENST00000554424 C1QBPQ07021 282 aaKnown RBP20■□□□□ 0.79
TC2N-204ENST00000554424 DNAJC5BQ9UF47 199 aa19.9■□□□□ 0.78
TC2N-204ENST00000554424 NCBP3Q53F19 620 aaKnown RBP19.8■□□□□ 0.76
TC2N-204ENST00000554424 NPM3O75607 178 aaKnown RBP19.68■□□□□ 0.74
TC2N-204ENST00000554424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.61■□□□□ 0.73
TC2N-204ENST00000554424 U3KPZ7 1027 aaPredicted RBP19.27■□□□□ 0.68
TC2N-204ENST00000554424 SPINK5Q9NQ38 1064 aaPredicted RBP19.11■□□□□ 0.65
TC2N-204ENST00000554424 KCNA4P22459 653 aa19.06■□□□□ 0.64
TC2N-204ENST00000554424 DSG3P32926 999 aa19■□□□□ 0.63
TC2N-204ENST00000554424 CAPN15O75808 1086 aa18.98■□□□□ 0.63
TC2N-204ENST00000554424 SLC4A2P04920 1241 aa18.93■□□□□ 0.62
TC2N-204ENST00000554424 POTEHQ6S545 545 aa18.65■□□□□ 0.58
TC2N-204ENST00000554424 TRHP20396 242 aaPredicted RBP18.62■□□□□ 0.57
TC2N-204ENST00000554424 ABCB7O75027 752 aa18.6■□□□□ 0.57
TC2N-204ENST00000554424 ZNF219Q9P2Y4 722 aaPredicted RBP18.51■□□□□ 0.55
TC2N-204ENST00000554424 APLP2Q06481 763 aa18.45■□□□□ 0.54
TC2N-204ENST00000554424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
TC2N-204ENST00000554424 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
TC2N-204ENST00000554424 SAMD1Q6SPF0 538 aaPredicted RBP18.34■□□□□ 0.53
TC2N-204ENST00000554424 MYCNP04198 464 aaPredicted RBP18.13■□□□□ 0.49
TC2N-204ENST00000554424 POLA2Q14181 598 aa18.06■□□□□ 0.48
TC2N-204ENST00000554424 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
TC2N-204ENST00000554424 ATF5Q9Y2D1 282 aaPredicted RBP17.9■□□□□ 0.46
TC2N-204ENST00000554424 CHRDL2Q6WN34 429 aa17.84■□□□□ 0.45
TC2N-204ENST00000554424 SLC4A1APQ9BWU0 796 aaKnown RBP17.84■□□□□ 0.45
TC2N-204ENST00000554424 FOXD4L1Q9NU39 408 aa17.79■□□□□ 0.44
TC2N-204ENST00000554424 ZBTB22O15209 634 aa17.6■□□□□ 0.41
TC2N-204ENST00000554424 AKT1S1Q96B36 256 aa17.57■□□□□ 0.4
TC2N-204ENST00000554424 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
TC2N-204ENST00000554424 ZBTB12Q9Y330 459 aaPredicted RBP17.54■□□□□ 0.4
TC2N-204ENST00000554424 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
TC2N-204ENST00000554424 PIP4P2Q8N4L2 257 aa17.39■□□□□ 0.37
TC2N-204ENST00000554424 PITPNM1O00562 1244 aa17.33■□□□□ 0.36
TC2N-204ENST00000554424 SP7Q8TDD2 431 aaPredicted RBP17.33■□□□□ 0.36
TC2N-204ENST00000554424 ATXN8OSP0DMR3 200 aa17.22■□□□□ 0.35
TC2N-204ENST00000554424 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
TC2N-204ENST00000554424 HAX1O00165 279 aa17.08■□□□□ 0.32
TC2N-204ENST00000554424 SPDYE2BA6NHP3 402 aa17.04■□□□□ 0.32
TC2N-204ENST00000554424 SPDYE6P0CI01 402 aa17.04■□□□□ 0.32
TC2N-204ENST00000554424 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
TC2N-204ENST00000554424 SPDYE2Q495Y8 402 aa17.04■□□□□ 0.32
TC2N-204ENST00000554424 FBLN2P98095 1184 aa17■□□□□ 0.31
TC2N-204ENST00000554424 EVX2Q03828 476 aa17■□□□□ 0.31
TC2N-204ENST00000554424 SSUH2Q9Y2M2 353 aa16.85■□□□□ 0.29
TC2N-204ENST00000554424 CLEC11AQ9Y240 323 aa16.84■□□□□ 0.29
TC2N-204ENST00000554424 PRKAR2AP13861 404 aaKnown RBP16.83■□□□□ 0.28
TC2N-204ENST00000554424 SPDYE1Q8NFV5 336 aaPredicted RBP16.8■□□□□ 0.28
TC2N-204ENST00000554424 ZNF692Q9BU19 519 aaPredicted RBP16.8■□□□□ 0.28
TC2N-204ENST00000554424 C19orf67A6NJJ6 358 aa16.67■□□□□ 0.26
TC2N-204ENST00000554424 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
TC2N-204ENST00000554424 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
TC2N-204ENST00000554424 GABBR2O75899 941 aa16.51■□□□□ 0.23
TC2N-204ENST00000554424 PRR29P0C7W0 189 aa16.48■□□□□ 0.23
TC2N-204ENST00000554424 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
TC2N-204ENST00000554424 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.2
TC2N-204ENST00000554424 FARP1Q9Y4F1 1045 aaPredicted RBP16.29■□□□□ 0.2
TC2N-204ENST00000554424 CD44P16070 742 aaKnown RBP16.27■□□□□ 0.2
TC2N-204ENST00000554424 POTEIP0CG38 1075 aa16.24■□□□□ 0.19
TC2N-204ENST00000554424 LHX8Q68G74 356 aa16.24■□□□□ 0.19
TC2N-204ENST00000554424 CREBZFQ9NS37 354 aa16.1■□□□□ 0.17
TC2N-204ENST00000554424 ZNF579Q8NAF0 562 aaKnown RBP16.01■□□□□ 0.15
TC2N-204ENST00000554424 ZRANB1Q9UGI0 708 aa15.98■□□□□ 0.15
TC2N-204ENST00000554424 SPDYE4A6NLX3 237 aa15.96■□□□□ 0.15
TC2N-204ENST00000554424 CLCN6P51797 869 aa15.95■□□□□ 0.14
TC2N-204ENST00000554424 STAG3Q9UJ98 1225 aa15.93■□□□□ 0.14
TC2N-204ENST00000554424 DCBLD2Q96PD2 775 aa15.91■□□□□ 0.14
TC2N-204ENST00000554424 GALR2O43603 387 aaPredicted RBP15.9■□□□□ 0.14
TC2N-204ENST00000554424 MNX1P50219 401 aaPredicted RBP15.82■□□□□ 0.12
TC2N-204ENST00000554424 PHF12Q96QT6 1004 aa15.81■□□□□ 0.12
TC2N-204ENST00000554424 POTEB2H3BUK9 544 aa15.71■□□□□ 0.11
TC2N-204ENST00000554424 PAK3O75914 559 aaPredicted RBP15.67■□□□□ 0.1
TC2N-204ENST00000554424 OTUD5Q96G74 571 aa15.66■□□□□ 0.1
TC2N-204ENST00000554424 PELP1Q8IZL8 1130 aaKnown RBP15.65■□□□□ 0.1
TC2N-204ENST00000554424 NPM1P06748 294 aaKnown RBP eCLIP15.64■□□□□ 0.09
TC2N-204ENST00000554424 PROM2Q8N271 834 aa15.59■□□□□ 0.09
TC2N-204ENST00000554424 MS4A3Q96HJ5 214 aa15.57■□□□□ 0.08
TC2N-204ENST00000554424 ASTLQ6HA08 431 aaPredicted RBP15.5■□□□□ 0.07
TC2N-204ENST00000554424 ATMINO43313 823 aaPredicted RBP15.47■□□□□ 0.07
TC2N-204ENST00000554424 POTEJP0CG39 1038 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms