RNA–Protein interactions for RNA: ENST00000553987.1

GNPNAT1-202, Transcript of glucosamine-phosphate N-acetyltransferase 1, humanhuman

TSL 5

Gene GNPNAT1, Length 234 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPNAT1-202ENST00000553987 AEBP2Q6ZN18 517 aaPredicted RBP20.87■□□□□ 0.93
GNPNAT1-202ENST00000553987 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
GNPNAT1-202ENST00000553987 PHF23Q9BUL5 403 aaPredicted RBP18.2■□□□□ 0.5
GNPNAT1-202ENST00000553987 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
GNPNAT1-202ENST00000553987 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
GNPNAT1-202ENST00000553987 FOXD1Q16676 465 aa16.36■□□□□ 0.21
GNPNAT1-202ENST00000553987 ADRA2BP18089 450 aa15.99■□□□□ 0.15
GNPNAT1-202ENST00000553987 PPP6R1Q9UPN7 881 aa15.97■□□□□ 0.15
GNPNAT1-202ENST00000553987 PIAS4Q8N2W9 510 aaPredicted RBP15.52■□□□□ 0.08
GNPNAT1-202ENST00000553987 MSH5O43196 834 aa14.98□□□□□ -0.01
GNPNAT1-202ENST00000553987 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
GNPNAT1-202ENST00000553987 KCNA4P22459 653 aa14.92□□□□□ -0.02
GNPNAT1-202ENST00000553987 NCBP3Q53F19 620 aaKnown RBP14.64□□□□□ -0.07
GNPNAT1-202ENST00000553987 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
GNPNAT1-202ENST00000553987 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
GNPNAT1-202ENST00000553987 MAPK8IP2Q13387 824 aaPredicted RBP14.42□□□□□ -0.1
GNPNAT1-202ENST00000553987 NPM3O75607 178 aaKnown RBP14.41□□□□□ -0.1
GNPNAT1-202ENST00000553987 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.13
GNPNAT1-202ENST00000553987 EHMT2Q96KQ7 1210 aa14.22□□□□□ -0.13
GNPNAT1-202ENST00000553987 DMRT2Q9Y5R5 561 aa14.14□□□□□ -0.15
GNPNAT1-202ENST00000553987 POTEDQ86YR6 584 aa14.09□□□□□ -0.15
GNPNAT1-202ENST00000553987 RNF216Q9NWF9 866 aaPredicted RBP14.09□□□□□ -0.15
GNPNAT1-202ENST00000553987 HOXD11P31277 338 aaPredicted RBP13.95□□□□□ -0.18
GNPNAT1-202ENST00000553987 DNAJC5BQ9UF47 199 aa13.89□□□□□ -0.19
GNPNAT1-202ENST00000553987 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
GNPNAT1-202ENST00000553987 ZBTB22O15209 634 aa13.72□□□□□ -0.21
GNPNAT1-202ENST00000553987 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
GNPNAT1-202ENST00000553987 DCAF8L1A6NGE4 600 aa13.58□□□□□ -0.24
GNPNAT1-202ENST00000553987 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
GNPNAT1-202ENST00000553987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.35□□□□□ -0.27
GNPNAT1-202ENST00000553987 MYCNP04198 464 aaPredicted RBP13.32□□□□□ -0.28
GNPNAT1-202ENST00000553987 ATXN8OSP0DMR3 200 aa13.13□□□□□ -0.31
GNPNAT1-202ENST00000553987 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
GNPNAT1-202ENST00000553987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
GNPNAT1-202ENST00000553987 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
GNPNAT1-202ENST00000553987 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
GNPNAT1-202ENST00000553987 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
GNPNAT1-202ENST00000553987 APLP2Q06481 763 aa12.87□□□□□ -0.35
GNPNAT1-202ENST00000553987 RNF39Q9H2S5 420 aa12.85□□□□□ -0.35
GNPNAT1-202ENST00000553987 C1QBPQ07021 282 aaKnown RBP12.72□□□□□ -0.37
GNPNAT1-202ENST00000553987 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.37
GNPNAT1-202ENST00000553987 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
GNPNAT1-202ENST00000553987 TRHP20396 242 aaPredicted RBP12.67□□□□□ -0.38
GNPNAT1-202ENST00000553987 CAPN15O75808 1086 aa12.65□□□□□ -0.38
GNPNAT1-202ENST00000553987 CACNB1Q02641 598 aaPredicted RBP12.56□□□□□ -0.4
GNPNAT1-202ENST00000553987 FKBP8Q14318 412 aa12.56□□□□□ -0.4
GNPNAT1-202ENST00000553987 POLA2Q14181 598 aa12.5□□□□□ -0.41
GNPNAT1-202ENST00000553987 ABCB7O75027 752 aa12.44□□□□□ -0.42
GNPNAT1-202ENST00000553987 FBLN2P98095 1184 aa12.4□□□□□ -0.42
GNPNAT1-202ENST00000553987 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
GNPNAT1-202ENST00000553987 DSG3P32926 999 aa12.34□□□□□ -0.43
GNPNAT1-202ENST00000553987 ZBTB12Q9Y330 459 aaPredicted RBP12.3□□□□□ -0.44
GNPNAT1-202ENST00000553987 SPDYE4A6NLX3 237 aa12.26□□□□□ -0.45
GNPNAT1-202ENST00000553987 OSCARQ8IYS5 282 aa12.07□□□□□ -0.48
GNPNAT1-202ENST00000553987 PROM2Q8N271 834 aa12.05□□□□□ -0.48
GNPNAT1-202ENST00000553987 ZNF692Q9BU19 519 aaPredicted RBP12.02□□□□□ -0.49
GNPNAT1-202ENST00000553987 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
GNPNAT1-202ENST00000553987 SPDYE2BA6NHP3 402 aa12□□□□□ -0.49
GNPNAT1-202ENST00000553987 SPDYE6P0CI01 402 aa12□□□□□ -0.49
GNPNAT1-202ENST00000553987 SPDYE2Q495Y8 402 aa12□□□□□ -0.49
GNPNAT1-202ENST00000553987 AMER1Q5JTC6 1135 aaPredicted RBP11.93□□□□□ -0.5
GNPNAT1-202ENST00000553987 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
GNPNAT1-202ENST00000553987 RTN4Q9NQC3 1192 aaKnown RBP11.9□□□□□ -0.5
GNPNAT1-202ENST00000553987 PABPN1Q86U42 306 aaKnown RBP eCLIP11.86□□□□□ -0.51
GNPNAT1-202ENST00000553987 VASPP50552 380 aaPredicted RBP11.84□□□□□ -0.51
GNPNAT1-202ENST00000553987 RBM42Q9BTD8 480 aaKnown RBP11.76□□□□□ -0.53
GNPNAT1-202ENST00000553987 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
GNPNAT1-202ENST00000553987 IFNLR1Q8IU57 520 aaPredicted RBP11.7□□□□□ -0.54
GNPNAT1-202ENST00000553987 AKT1S1Q96B36 256 aa11.67□□□□□ -0.54
GNPNAT1-202ENST00000553987 PLCD3Q8N3E9 789 aa11.64□□□□□ -0.55
GNPNAT1-202ENST00000553987 MIER1Q8N108 512 aa11.62□□□□□ -0.55
GNPNAT1-202ENST00000553987 KLHL34Q8N239 644 aa11.62□□□□□ -0.55
GNPNAT1-202ENST00000553987 SPDYE1Q8NFV5 336 aaPredicted RBP11.58□□□□□ -0.56
GNPNAT1-202ENST00000553987 REM2Q8IYK8 340 aaPredicted RBP11.56□□□□□ -0.56
GNPNAT1-202ENST00000553987 CLEC11AQ9Y240 323 aa11.55□□□□□ -0.56
GNPNAT1-202ENST00000553987 PLEKHG5O94827 1062 aa11.54□□□□□ -0.56
GNPNAT1-202ENST00000553987 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
GNPNAT1-202ENST00000553987 PRR29P0C7W0 189 aa11.47□□□□□ -0.57
GNPNAT1-202ENST00000553987 ZBTB47Q9UFB7 747 aaPredicted RBP11.47□□□□□ -0.57
GNPNAT1-202ENST00000553987 PITPNM1O00562 1244 aa11.43□□□□□ -0.58
GNPNAT1-202ENST00000553987 PKD2Q13563 968 aa11.41□□□□□ -0.58
GNPNAT1-202ENST00000553987 CREBZFQ9NS37 354 aa11.37□□□□□ -0.59
GNPNAT1-202ENST00000553987 DCAF8L2P0C7V8 631 aa11.34□□□□□ -0.59
GNPNAT1-202ENST00000553987 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.6
GNPNAT1-202ENST00000553987 CIZ1Q9ULV3 898 aaPredicted RBP11.33□□□□□ -0.6
GNPNAT1-202ENST00000553987 MNX1P50219 401 aaPredicted RBP11.27□□□□□ -0.61
GNPNAT1-202ENST00000553987 NUBP1P53384 320 aa11.25□□□□□ -0.61
GNPNAT1-202ENST00000553987 GSE1Q14687 1217 aa11.23□□□□□ -0.61
GNPNAT1-202ENST00000553987 CHADLQ6NUI6 762 aa11.23□□□□□ -0.61
GNPNAT1-202ENST00000553987 SLC24A1O60721 1099 aa11.22□□□□□ -0.61
GNPNAT1-202ENST00000553987 DCAF8Q5TAQ9 597 aa11.22□□□□□ -0.61
GNPNAT1-202ENST00000553987 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.61
GNPNAT1-202ENST00000553987 RGL2O15211 777 aa11.19□□□□□ -0.62
GNPNAT1-202ENST00000553987 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
GNPNAT1-202ENST00000553987 FAM212AQ96EL1 285 aa11.18□□□□□ -0.62
GNPNAT1-202ENST00000553987 PRKAR2AP13861 404 aaKnown RBP11.16□□□□□ -0.62
GNPNAT1-202ENST00000553987 CHRDL2Q6WN34 429 aa11.15□□□□□ -0.62
GNPNAT1-202ENST00000553987 RASEFQ8IZ41 740 aa11.15□□□□□ -0.62
GNPNAT1-202ENST00000553987 FXR2P51116 673 aaKnown RBP eCLIP11.14□□□□□ -0.63
GNPNAT1-202ENST00000553987 FARP1Q9Y4F1 1045 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms