RNA–Protein interactions for RNA: ENST00000553907.1

ACTR10-203, Transcript of actin related protein 10 homolog, humanhuman

TSL 3

Gene ACTR10, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR10-203ENST00000553907 AEBP2Q6ZN18 517 aaPredicted RBP35.59■■■■□ 3.29
ACTR10-203ENST00000553907 CHIC1Q5VXU3 224 aa35.11■■■■□ 3.21
ACTR10-203ENST00000553907 PHF23Q9BUL5 403 aaPredicted RBP30.81■■■□□ 2.52
ACTR10-203ENST00000553907 SENP3Q9H4L4 574 aaPredicted RBP30.34■■■□□ 2.45
ACTR10-203ENST00000553907 PLPPR3Q6T4P5 718 aa28.7■■■□□ 2.18
ACTR10-203ENST00000553907 FOXD1Q16676 465 aa28.01■■■□□ 2.07
ACTR10-203ENST00000553907 ADRA2BP18089 450 aa27.12■■□□□ 1.93
ACTR10-203ENST00000553907 PPP6R1Q9UPN7 881 aa27.08■■□□□ 1.93
ACTR10-203ENST00000553907 PIAS4Q8N2W9 510 aaPredicted RBP26.56■■□□□ 1.84
ACTR10-203ENST00000553907 MSH5O43196 834 aa25.86■■□□□ 1.73
ACTR10-203ENST00000553907 PPP4R3CPQ6ZMV5 832 aa25.26■■□□□ 1.63
ACTR10-203ENST00000553907 SCAF1Q9H7N4 1312 aaKnown RBP25.02■■□□□ 1.6
ACTR10-203ENST00000553907 KCNA4P22459 653 aa24.93■■□□□ 1.58
ACTR10-203ENST00000553907 NCBP3Q53F19 620 aaKnown RBP24.8■■□□□ 1.56
ACTR10-203ENST00000553907 CNKSR2Q8WXI2 1034 aa24.54■■□□□ 1.52
ACTR10-203ENST00000553907 MAPK8IP2Q13387 824 aaPredicted RBP24.49■■□□□ 1.51
ACTR10-203ENST00000553907 NPM3O75607 178 aaKnown RBP24.29■■□□□ 1.48
ACTR10-203ENST00000553907 DMRT2Q9Y5R5 561 aa24.2■■□□□ 1.46
ACTR10-203ENST00000553907 RNF216Q9NWF9 866 aaPredicted RBP23.99■■□□□ 1.43
ACTR10-203ENST00000553907 SLC4A1APQ9BWU0 796 aaKnown RBP23.87■■□□□ 1.41
ACTR10-203ENST00000553907 HOXD11P31277 338 aaPredicted RBP23.79■■□□□ 1.4
ACTR10-203ENST00000553907 DNAJC5BQ9UF47 199 aa23.6■■□□□ 1.37
ACTR10-203ENST00000553907 EHMT2Q96KQ7 1210 aa23.46■■□□□ 1.35
ACTR10-203ENST00000553907 DCAF8L1A6NGE4 600 aa23.2■■□□□ 1.3
ACTR10-203ENST00000553907 CSRNP3Q8WYN3 585 aa23■■□□□ 1.27
ACTR10-203ENST00000553907 POTEDQ86YR6 584 aa22.98■■□□□ 1.27
ACTR10-203ENST00000553907 FOXD4L1Q9NU39 408 aa22.95■■□□□ 1.26
ACTR10-203ENST00000553907 ZBTB22O15209 634 aa22.89■■□□□ 1.25
ACTR10-203ENST00000553907 SLC4A2P04920 1241 aa22.83■■□□□ 1.25
ACTR10-203ENST00000553907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.75■■□□□ 1.23
ACTR10-203ENST00000553907 MYCNP04198 464 aaPredicted RBP22.53■■□□□ 1.2
ACTR10-203ENST00000553907 U3KPZ7 1027 aaPredicted RBP22.32■■□□□ 1.16
ACTR10-203ENST00000553907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.3■■□□□ 1.16
ACTR10-203ENST00000553907 HNRNPUL2Q1KMD3 747 aaKnown RBP22.3■■□□□ 1.16
ACTR10-203ENST00000553907 SAMD1Q6SPF0 538 aaPredicted RBP22.2■■□□□ 1.14
ACTR10-203ENST00000553907 ATXN8OSP0DMR3 200 aa22.17■■□□□ 1.14
ACTR10-203ENST00000553907 RNF39Q9H2S5 420 aa22.11■■□□□ 1.13
ACTR10-203ENST00000553907 APLP2Q06481 763 aa22.05■■□□□ 1.12
ACTR10-203ENST00000553907 C1QBPQ07021 282 aaKnown RBP21.92■■□□□ 1.1
ACTR10-203ENST00000553907 ATF5Q9Y2D1 282 aaPredicted RBP21.75■■□□□ 1.07
ACTR10-203ENST00000553907 ZNF219Q9P2Y4 722 aaPredicted RBP21.62■■□□□ 1.05
ACTR10-203ENST00000553907 CAPN15O75808 1086 aa21.6■■□□□ 1.05
ACTR10-203ENST00000553907 SPINK5Q9NQ38 1064 aaPredicted RBP21.6■■□□□ 1.05
ACTR10-203ENST00000553907 TRHP20396 242 aaPredicted RBP21.53■■□□□ 1.04
ACTR10-203ENST00000553907 CACNB1Q02641 598 aaPredicted RBP21.4■■□□□ 1.02
ACTR10-203ENST00000553907 POLA2Q14181 598 aa21.23■□□□□ 0.99
ACTR10-203ENST00000553907 ABCB7O75027 752 aa21.16■□□□□ 0.98
ACTR10-203ENST00000553907 DSG3P32926 999 aa21.1■□□□□ 0.97
ACTR10-203ENST00000553907 ZBTB12Q9Y330 459 aaPredicted RBP21.04■□□□□ 0.96
ACTR10-203ENST00000553907 FBLN2P98095 1184 aa21.03■□□□□ 0.96
ACTR10-203ENST00000553907 MKRN4PQ13434 485 aaPredicted RBP20.85■□□□□ 0.93
ACTR10-203ENST00000553907 FKBP8Q14318 412 aa20.85■□□□□ 0.93
ACTR10-203ENST00000553907 SPDYE4A6NLX3 237 aa20.61■□□□□ 0.89
ACTR10-203ENST00000553907 OSCARQ8IYS5 282 aa20.49■□□□□ 0.87
ACTR10-203ENST00000553907 SPDYE2BA6NHP3 402 aa20.42■□□□□ 0.86
ACTR10-203ENST00000553907 SPDYE6P0CI01 402 aa20.42■□□□□ 0.86
ACTR10-203ENST00000553907 SPDYE2Q495Y8 402 aa20.42■□□□□ 0.86
ACTR10-203ENST00000553907 ZNF692Q9BU19 519 aaPredicted RBP20.36■□□□□ 0.85
ACTR10-203ENST00000553907 PROM2Q8N271 834 aa20.25■□□□□ 0.83
ACTR10-203ENST00000553907 RBM42Q9BTD8 480 aaKnown RBP20.25■□□□□ 0.83
ACTR10-203ENST00000553907 SSUH2Q9Y2M2 353 aa20.23■□□□□ 0.83
ACTR10-203ENST00000553907 FBXO3Q9UK99 471 aa20.16■□□□□ 0.82
ACTR10-203ENST00000553907 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
ACTR10-203ENST00000553907 AKT1S1Q96B36 256 aa20■□□□□ 0.79
ACTR10-203ENST00000553907 STAG3Q9UJ98 1225 aa19.89■□□□□ 0.77
ACTR10-203ENST00000553907 VASPP50552 380 aaPredicted RBP19.79■□□□□ 0.76
ACTR10-203ENST00000553907 SPDYE1Q8NFV5 336 aaPredicted RBP19.77■□□□□ 0.76
ACTR10-203ENST00000553907 REM2Q8IYK8 340 aaPredicted RBP19.75■□□□□ 0.75
ACTR10-203ENST00000553907 CLEC11AQ9Y240 323 aa19.63■□□□□ 0.73
ACTR10-203ENST00000553907 PLCD3Q8N3E9 789 aa19.57■□□□□ 0.72
ACTR10-203ENST00000553907 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
ACTR10-203ENST00000553907 AMER1Q5JTC6 1135 aaPredicted RBP19.53■□□□□ 0.72
ACTR10-203ENST00000553907 MIER1Q8N108 512 aa19.53■□□□□ 0.72
ACTR10-203ENST00000553907 PITPNM1O00562 1244 aa19.52■□□□□ 0.72
ACTR10-203ENST00000553907 PRR29P0C7W0 189 aa19.51■□□□□ 0.71
ACTR10-203ENST00000553907 IFNLR1Q8IU57 520 aaPredicted RBP19.46■□□□□ 0.71
ACTR10-203ENST00000553907 KLHL34Q8N239 644 aa19.44■□□□□ 0.7
ACTR10-203ENST00000553907 ZBTB47Q9UFB7 747 aaPredicted RBP19.41■□□□□ 0.7
ACTR10-203ENST00000553907 RTN4Q9NQC3 1192 aaKnown RBP19.35■□□□□ 0.69
ACTR10-203ENST00000553907 SPOCK2Q92563 424 aa19.29■□□□□ 0.68
ACTR10-203ENST00000553907 CREBZFQ9NS37 354 aa19.24■□□□□ 0.67
ACTR10-203ENST00000553907 CHRDL2Q6WN34 429 aa19.22■□□□□ 0.67
ACTR10-203ENST00000553907 FXR2P51116 673 aaKnown RBP eCLIP19.09■□□□□ 0.65
ACTR10-203ENST00000553907 NPM1P06748 294 aaKnown RBP eCLIP19.07■□□□□ 0.64
ACTR10-203ENST00000553907 PRKAR2AP13861 404 aaKnown RBP19.05■□□□□ 0.64
ACTR10-203ENST00000553907 CHADLQ6NUI6 762 aa19.05■□□□□ 0.64
ACTR10-203ENST00000553907 MNX1P50219 401 aaPredicted RBP19.03■□□□□ 0.64
ACTR10-203ENST00000553907 PIP4P2Q8N4L2 257 aa18.99■□□□□ 0.63
ACTR10-203ENST00000553907 FARP1Q9Y4F1 1045 aaPredicted RBP18.95■□□□□ 0.62
ACTR10-203ENST00000553907 NUBP1P53384 320 aa18.94■□□□□ 0.62
ACTR10-203ENST00000553907 CIZ1Q9ULV3 898 aaPredicted RBP18.94■□□□□ 0.62
ACTR10-203ENST00000553907 GSE1Q14687 1217 aa18.91■□□□□ 0.62
ACTR10-203ENST00000553907 PKD2Q13563 968 aa18.9■□□□□ 0.62
ACTR10-203ENST00000553907 FAM212AQ96EL1 285 aa18.9■□□□□ 0.62
ACTR10-203ENST00000553907 DCAF8Q5TAQ9 597 aa18.84■□□□□ 0.61
ACTR10-203ENST00000553907 TRIM41Q8WV44 630 aa18.84■□□□□ 0.61
ACTR10-203ENST00000553907 ECM2O94769 699 aaPredicted RBP18.83■□□□□ 0.6
ACTR10-203ENST00000553907 RASEFQ8IZ41 740 aa18.8■□□□□ 0.6
ACTR10-203ENST00000553907 PAK3O75914 559 aaPredicted RBP18.71■□□□□ 0.59
ACTR10-203ENST00000553907 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms