RNA–Protein interactions for RNA: ENST00000553746.1

ATL1-204, Transcript of atlastin GTPase 1, humanhuman

TSL 2

Gene ATL1, Length 370 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-204ENST00000553746 AEBP2Q6ZN18 517 aaPredicted RBP29.96■■■□□ 2.39
ATL1-204ENST00000553746 CHIC1Q5VXU3 224 aa28.63■■■□□ 2.17
ATL1-204ENST00000553746 SENP3Q9H4L4 574 aaPredicted RBP25.58■■□□□ 1.69
ATL1-204ENST00000553746 PHF23Q9BUL5 403 aaPredicted RBP25.25■■□□□ 1.63
ATL1-204ENST00000553746 FOXD1Q16676 465 aa23.79■■□□□ 1.4
ATL1-204ENST00000553746 PLPPR3Q6T4P5 718 aa22.94■■□□□ 1.26
ATL1-204ENST00000553746 PPP6R1Q9UPN7 881 aa22.35■■□□□ 1.17
ATL1-204ENST00000553746 ADRA2BP18089 450 aa22.27■■□□□ 1.16
ATL1-204ENST00000553746 MSH5O43196 834 aa22.26■■□□□ 1.15
ATL1-204ENST00000553746 PIAS4Q8N2W9 510 aaPredicted RBP22.24■■□□□ 1.15
ATL1-204ENST00000553746 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
ATL1-204ENST00000553746 SCAF1Q9H7N4 1312 aaKnown RBP20.45■□□□□ 0.86
ATL1-204ENST00000553746 MAPK8IP2Q13387 824 aaPredicted RBP20.41■□□□□ 0.86
ATL1-204ENST00000553746 DMRT2Q9Y5R5 561 aa20.31■□□□□ 0.84
ATL1-204ENST00000553746 PPP4R3CPQ6ZMV5 832 aa20.11■□□□□ 0.81
ATL1-204ENST00000553746 CNKSR2Q8WXI2 1034 aa19.73■□□□□ 0.75
ATL1-204ENST00000553746 HOXD11P31277 338 aaPredicted RBP19.63■□□□□ 0.73
ATL1-204ENST00000553746 RNF216Q9NWF9 866 aaPredicted RBP19.53■□□□□ 0.72
ATL1-204ENST00000553746 NCBP3Q53F19 620 aaKnown RBP19.41■□□□□ 0.7
ATL1-204ENST00000553746 DCAF8L1A6NGE4 600 aa19.37■□□□□ 0.69
ATL1-204ENST00000553746 NPM3O75607 178 aaKnown RBP19.09■□□□□ 0.65
ATL1-204ENST00000553746 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.64
ATL1-204ENST00000553746 RNF39Q9H2S5 420 aa19■□□□□ 0.63
ATL1-204ENST00000553746 CACNB1Q02641 598 aaPredicted RBP18.96■□□□□ 0.63
ATL1-204ENST00000553746 KCNA4P22459 653 aa18.82■□□□□ 0.6
ATL1-204ENST00000553746 C1QBPQ07021 282 aaKnown RBP18.75■□□□□ 0.59
ATL1-204ENST00000553746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.58
ATL1-204ENST00000553746 U3KPZ7 1027 aaPredicted RBP18.28■□□□□ 0.52
ATL1-204ENST00000553746 SLC4A2P04920 1241 aa18.2■□□□□ 0.5
ATL1-204ENST00000553746 SPINK5Q9NQ38 1064 aaPredicted RBP17.95■□□□□ 0.46
ATL1-204ENST00000553746 CAPN15O75808 1086 aa17.91■□□□□ 0.46
ATL1-204ENST00000553746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
ATL1-204ENST00000553746 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
ATL1-204ENST00000553746 APLP2Q06481 763 aa17.85■□□□□ 0.45
ATL1-204ENST00000553746 DSG3P32926 999 aa17.82■□□□□ 0.44
ATL1-204ENST00000553746 SLC4A1APQ9BWU0 796 aaKnown RBP17.81■□□□□ 0.44
ATL1-204ENST00000553746 SAMD1Q6SPF0 538 aaPredicted RBP17.76■□□□□ 0.43
ATL1-204ENST00000553746 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
ATL1-204ENST00000553746 MYCNP04198 464 aaPredicted RBP17.67■□□□□ 0.42
ATL1-204ENST00000553746 TRHP20396 242 aaPredicted RBP17.65■□□□□ 0.42
ATL1-204ENST00000553746 FOXD4L1Q9NU39 408 aa17.55■□□□□ 0.4
ATL1-204ENST00000553746 ABCB7O75027 752 aa17.48■□□□□ 0.39
ATL1-204ENST00000553746 ZBTB22O15209 634 aa17.3■□□□□ 0.36
ATL1-204ENST00000553746 POLA2Q14181 598 aa17.25■□□□□ 0.35
ATL1-204ENST00000553746 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
ATL1-204ENST00000553746 ATXN8OSP0DMR3 200 aa17.07■□□□□ 0.32
ATL1-204ENST00000553746 RBM42Q9BTD8 480 aaKnown RBP17.02■□□□□ 0.32
ATL1-204ENST00000553746 ZBTB12Q9Y330 459 aaPredicted RBP16.96■□□□□ 0.31
ATL1-204ENST00000553746 POTEHQ6S545 545 aa16.84■□□□□ 0.29
ATL1-204ENST00000553746 AKT1S1Q96B36 256 aa16.67■□□□□ 0.26
ATL1-204ENST00000553746 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
ATL1-204ENST00000553746 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
ATL1-204ENST00000553746 FBLN2P98095 1184 aa16.57■□□□□ 0.24
ATL1-204ENST00000553746 CHRDL2Q6WN34 429 aa16.57■□□□□ 0.24
ATL1-204ENST00000553746 REM2Q8IYK8 340 aaPredicted RBP16.48■□□□□ 0.23
ATL1-204ENST00000553746 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
ATL1-204ENST00000553746 SPDYE2BA6NHP3 402 aa16.43■□□□□ 0.22
ATL1-204ENST00000553746 SPDYE6P0CI01 402 aa16.43■□□□□ 0.22
ATL1-204ENST00000553746 SPDYE2Q495Y8 402 aa16.43■□□□□ 0.22
ATL1-204ENST00000553746 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
ATL1-204ENST00000553746 PITPNM1O00562 1244 aa16.28■□□□□ 0.2
ATL1-204ENST00000553746 SSUH2Q9Y2M2 353 aa16.23■□□□□ 0.19
ATL1-204ENST00000553746 ZNF692Q9BU19 519 aaPredicted RBP16.22■□□□□ 0.19
ATL1-204ENST00000553746 PIP4P2Q8N4L2 257 aa16.2■□□□□ 0.18
ATL1-204ENST00000553746 FXR2P51116 673 aaKnown RBP eCLIP16.16■□□□□ 0.18
ATL1-204ENST00000553746 SPDYE1Q8NFV5 336 aaPredicted RBP16.11■□□□□ 0.17
ATL1-204ENST00000553746 CLEC11AQ9Y240 323 aa16■□□□□ 0.15
ATL1-204ENST00000553746 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
ATL1-204ENST00000553746 PRKAR2AP13861 404 aaKnown RBP15.86■□□□□ 0.13
ATL1-204ENST00000553746 HAX1O00165 279 aa15.85■□□□□ 0.13
ATL1-204ENST00000553746 SP7Q8TDD2 431 aaPredicted RBP15.85■□□□□ 0.13
ATL1-204ENST00000553746 PRR29P0C7W0 189 aa15.8■□□□□ 0.12
ATL1-204ENST00000553746 SPDYE4A6NLX3 237 aa15.74■□□□□ 0.11
ATL1-204ENST00000553746 CHADLQ6NUI6 762 aa15.67■□□□□ 0.1
ATL1-204ENST00000553746 EVX2Q03828 476 aa15.66■□□□□ 0.1
ATL1-204ENST00000553746 STAG3Q9UJ98 1225 aa15.64■□□□□ 0.09
ATL1-204ENST00000553746 C19orf67A6NJJ6 358 aa15.63■□□□□ 0.09
ATL1-204ENST00000553746 FARP1Q9Y4F1 1045 aaPredicted RBP15.52■□□□□ 0.08
ATL1-204ENST00000553746 PROM2Q8N271 834 aa15.45■□□□□ 0.06
ATL1-204ENST00000553746 CREBZFQ9NS37 354 aa15.45■□□□□ 0.06
ATL1-204ENST00000553746 CD44P16070 742 aaKnown RBP15.36■□□□□ 0.05
ATL1-204ENST00000553746 GABBR2O75899 941 aa15.35■□□□□ 0.05
ATL1-204ENST00000553746 CLCN6P51797 869 aa15.26■□□□□ 0.03
ATL1-204ENST00000553746 MNX1P50219 401 aaPredicted RBP15.22■□□□□ 0.03
ATL1-204ENST00000553746 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
ATL1-204ENST00000553746 ZNF579Q8NAF0 562 aaKnown RBP15.17■□□□□ 0.02
ATL1-204ENST00000553746 ZRANB1Q9UGI0 708 aa15.17■□□□□ 0.02
ATL1-204ENST00000553746 PAK3O75914 559 aaPredicted RBP15.09■□□□□ 0.01
ATL1-204ENST00000553746 FKBP8Q14318 412 aa15.06■□□□□ 0
ATL1-204ENST00000553746 POTEIP0CG38 1075 aa15.01□□□□□ -0.01
ATL1-204ENST00000553746 MIER1Q8N108 512 aa15□□□□□ -0.01
ATL1-204ENST00000553746 PLEKHG5O94827 1062 aa14.99□□□□□ -0.01
ATL1-204ENST00000553746 DCBLD2Q96PD2 775 aa14.95□□□□□ -0.02
ATL1-204ENST00000553746 PHF12Q96QT6 1004 aa14.95□□□□□ -0.02
ATL1-204ENST00000553746 GALR2O43603 387 aaPredicted RBP14.93□□□□□ -0.02
ATL1-204ENST00000553746 PLCD3Q8N3E9 789 aa14.88□□□□□ -0.03
ATL1-204ENST00000553746 LHX8Q68G74 356 aa14.87□□□□□ -0.03
ATL1-204ENST00000553746 TSPYL2Q9H2G4 693 aaPredicted RBP14.85□□□□□ -0.03
ATL1-204ENST00000553746 CCDC61Q9Y6R9 512 aa14.83□□□□□ -0.04
ATL1-204ENST00000553746 ZBTB47Q9UFB7 747 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms