RNA–Protein interactions for RNA: ENST00000553579.1

KLHDC2-203, Transcript of kelch domain containing 2, humanhuman

TSL 2

Gene KLHDC2, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC2-203ENST00000553579 AEBP2Q6ZN18 517 aaPredicted RBP29.04■■■□□ 2.24
KLHDC2-203ENST00000553579 CHIC1Q5VXU3 224 aa28.4■■■□□ 2.14
KLHDC2-203ENST00000553579 PHF23Q9BUL5 403 aaPredicted RBP25.07■■□□□ 1.6
KLHDC2-203ENST00000553579 SENP3Q9H4L4 574 aaPredicted RBP24.48■■□□□ 1.51
KLHDC2-203ENST00000553579 PLPPR3Q6T4P5 718 aa23.08■■□□□ 1.29
KLHDC2-203ENST00000553579 FOXD1Q16676 465 aa22.8■■□□□ 1.24
KLHDC2-203ENST00000553579 PPP6R1Q9UPN7 881 aa22.1■■□□□ 1.13
KLHDC2-203ENST00000553579 ADRA2BP18089 450 aa22.07■■□□□ 1.12
KLHDC2-203ENST00000553579 PIAS4Q8N2W9 510 aaPredicted RBP21.5■■□□□ 1.03
KLHDC2-203ENST00000553579 MSH5O43196 834 aa20.85■□□□□ 0.93
KLHDC2-203ENST00000553579 PPP4R3CPQ6ZMV5 832 aa20.41■□□□□ 0.86
KLHDC2-203ENST00000553579 KCNA4P22459 653 aa20.15■□□□□ 0.82
KLHDC2-203ENST00000553579 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.79
KLHDC2-203ENST00000553579 MAPK8IP2Q13387 824 aaPredicted RBP20.01■□□□□ 0.79
KLHDC2-203ENST00000553579 NCBP3Q53F19 620 aaKnown RBP19.82■□□□□ 0.76
KLHDC2-203ENST00000553579 CNKSR2Q8WXI2 1034 aa19.75■□□□□ 0.75
KLHDC2-203ENST00000553579 NPM3O75607 178 aaKnown RBP19.65■□□□□ 0.74
KLHDC2-203ENST00000553579 DMRT2Q9Y5R5 561 aa19.6■□□□□ 0.73
KLHDC2-203ENST00000553579 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.68
KLHDC2-203ENST00000553579 HOXD11P31277 338 aaPredicted RBP19.23■□□□□ 0.67
KLHDC2-203ENST00000553579 SLC4A1APQ9BWU0 796 aaKnown RBP19.16■□□□□ 0.66
KLHDC2-203ENST00000553579 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
KLHDC2-203ENST00000553579 EHMT2Q96KQ7 1210 aa18.86■□□□□ 0.61
KLHDC2-203ENST00000553579 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
KLHDC2-203ENST00000553579 DCAF8L1A6NGE4 600 aa18.79■□□□□ 0.6
KLHDC2-203ENST00000553579 ZBTB22O15209 634 aa18.6■□□□□ 0.57
KLHDC2-203ENST00000553579 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
KLHDC2-203ENST00000553579 SLC4A2P04920 1241 aa18.54■□□□□ 0.56
KLHDC2-203ENST00000553579 FOXD4L1Q9NU39 408 aa18.43■□□□□ 0.54
KLHDC2-203ENST00000553579 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■■□□□ 12.2
KLHDC2-203ENST00000553579 U3KPZ7 1027 aaPredicted RBP18.11■□□□□ 0.49
KLHDC2-203ENST00000553579 MYCNP04198 464 aaPredicted RBP18.08■□□□□ 0.48
KLHDC2-203ENST00000553579 RNF39Q9H2S5 420 aa17.94■□□□□ 0.46
KLHDC2-203ENST00000553579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.44
KLHDC2-203ENST00000553579 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.44
KLHDC2-203ENST00000553579 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
KLHDC2-203ENST00000553579 ATF5Q9Y2D1 282 aaPredicted RBP17.73■□□□□ 0.43
KLHDC2-203ENST00000553579 ATXN8OSP0DMR3 200 aa17.71■□□□□ 0.43
KLHDC2-203ENST00000553579 C1QBPQ07021 282 aaKnown RBP17.67■□□□□ 0.42
KLHDC2-203ENST00000553579 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
KLHDC2-203ENST00000553579 APLP2Q06481 763 aa17.52■□□□□ 0.4
KLHDC2-203ENST00000553579 CAPN15O75808 1086 aa17.46■□□□□ 0.39
KLHDC2-203ENST00000553579 TRHP20396 242 aaPredicted RBP17.43■□□□□ 0.38
KLHDC2-203ENST00000553579 CACNB1Q02641 598 aaPredicted RBP17.37■□□□□ 0.37
KLHDC2-203ENST00000553579 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
KLHDC2-203ENST00000553579 ABCB7O75027 752 aa17.21■□□□□ 0.35
KLHDC2-203ENST00000553579 POLA2Q14181 598 aa17.17■□□□□ 0.34
KLHDC2-203ENST00000553579 DSG3P32926 999 aa17.14■□□□□ 0.33
KLHDC2-203ENST00000553579 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
KLHDC2-203ENST00000553579 FBLN2P98095 1184 aa16.82■□□□□ 0.28
KLHDC2-203ENST00000553579 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.28
KLHDC2-203ENST00000553579 FKBP8Q14318 412 aa16.75■□□□□ 0.27
KLHDC2-203ENST00000553579 OSCARQ8IYS5 282 aa16.62■□□□□ 0.25
KLHDC2-203ENST00000553579 SPDYE4A6NLX3 237 aa16.56■□□□□ 0.24
KLHDC2-203ENST00000553579 SPDYE2BA6NHP3 402 aa16.38■□□□□ 0.21
KLHDC2-203ENST00000553579 SPDYE6P0CI01 402 aa16.38■□□□□ 0.21
KLHDC2-203ENST00000553579 SPDYE2Q495Y8 402 aa16.38■□□□□ 0.21
KLHDC2-203ENST00000553579 ZNF692Q9BU19 519 aaPredicted RBP16.38■□□□□ 0.21
KLHDC2-203ENST00000553579 SSUH2Q9Y2M2 353 aa16.32■□□□□ 0.2
KLHDC2-203ENST00000553579 PROM2Q8N271 834 aa16.3■□□□□ 0.2
KLHDC2-203ENST00000553579 RBM42Q9BTD8 480 aaKnown RBP16.22■□□□□ 0.19
KLHDC2-203ENST00000553579 PABPN1Q86U42 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
KLHDC2-203ENST00000553579 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
KLHDC2-203ENST00000553579 REM2Q8IYK8 340 aaPredicted RBP16■□□□□ 0.15
KLHDC2-203ENST00000553579 FBXO3Q9UK99 471 aa15.99■□□□□ 0.15
KLHDC2-203ENST00000553579 VASPP50552 380 aaPredicted RBP15.86■□□□□ 0.13
KLHDC2-203ENST00000553579 SPDYE1Q8NFV5 336 aaPredicted RBP15.86■□□□□ 0.13
KLHDC2-203ENST00000553579 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
KLHDC2-203ENST00000553579 PITPNM1O00562 1244 aa15.84■□□□□ 0.13
KLHDC2-203ENST00000553579 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
KLHDC2-203ENST00000553579 IFNLR1Q8IU57 520 aaPredicted RBP15.7■□□□□ 0.1
KLHDC2-203ENST00000553579 PRR29P0C7W0 189 aa15.69■□□□□ 0.1
KLHDC2-203ENST00000553579 MIER1Q8N108 512 aa15.67■□□□□ 0.1
KLHDC2-203ENST00000553579 PLCD3Q8N3E9 789 aa15.66■□□□□ 0.1
KLHDC2-203ENST00000553579 CREBZFQ9NS37 354 aa15.58■□□□□ 0.08
KLHDC2-203ENST00000553579 CHRDL2Q6WN34 429 aa15.57■□□□□ 0.08
KLHDC2-203ENST00000553579 KLHL34Q8N239 644 aa15.54■□□□□ 0.08
KLHDC2-203ENST00000553579 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
KLHDC2-203ENST00000553579 RTN4Q9NQC3 1192 aaKnown RBP15.51■□□□□ 0.07
KLHDC2-203ENST00000553579 PLEKHG5O94827 1062 aa15.48■□□□□ 0.07
KLHDC2-203ENST00000553579 FXR2P51116 673 aaKnown RBP eCLIP15.47■□□□□ 0.07
KLHDC2-203ENST00000553579 MNX1P50219 401 aaPredicted RBP15.45■□□□□ 0.06
KLHDC2-203ENST00000553579 PIP4P2Q8N4L2 257 aa15.45■□□□□ 0.06
KLHDC2-203ENST00000553579 PRKAR2AP13861 404 aaKnown RBP15.42■□□□□ 0.06
KLHDC2-203ENST00000553579 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
KLHDC2-203ENST00000553579 SPOCK2Q92563 424 aa15.42■□□□□ 0.06
KLHDC2-203ENST00000553579 ZBTB47Q9UFB7 747 aaPredicted RBP15.37■□□□□ 0.05
KLHDC2-203ENST00000553579 FARP1Q9Y4F1 1045 aaPredicted RBP15.3■□□□□ 0.04
KLHDC2-203ENST00000553579 NUBP1P53384 320 aa15.29■□□□□ 0.04
KLHDC2-203ENST00000553579 NPM1P06748 294 aaKnown RBP eCLIP15.22■□□□□ 0.03
KLHDC2-203ENST00000553579 PKD2Q13563 968 aa15.22■□□□□ 0.03
KLHDC2-203ENST00000553579 RASEFQ8IZ41 740 aa15.22■□□□□ 0.03
KLHDC2-203ENST00000553579 CIZ1Q9ULV3 898 aaPredicted RBP15.19■□□□□ 0.02
KLHDC2-203ENST00000553579 DCAF8Q5TAQ9 597 aa15.13■□□□□ 0.01
KLHDC2-203ENST00000553579 FAM212AQ96EL1 285 aa15.1■□□□□ 0.01
KLHDC2-203ENST00000553579 TSPYL2Q9H2G4 693 aaPredicted RBP15.09■□□□□ 0.01
KLHDC2-203ENST00000553579 GSE1Q14687 1217 aa15.07■□□□□ 0
KLHDC2-203ENST00000553579 ECM2O94769 699 aaPredicted RBP15.06■□□□□ 0
KLHDC2-203ENST00000553579 CD44P16070 742 aaKnown RBP14.98□□□□□ -0.01
KLHDC2-203ENST00000553579 RGL2O15211 777 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms