RNA–Protein interactions for RNA: ENST00000553398.1

LRMP-208, Transcript of lymphoid restricted membrane protein, humanhuman

TSL 3

Gene LRMP, Length 816 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMP-208ENST00000553398 AEBP2Q6ZN18 517 aaPredicted RBP28.56■■■□□ 2.16
LRMP-208ENST00000553398 CHIC1Q5VXU3 224 aa27.26■■□□□ 1.95
LRMP-208ENST00000553398 SENP3Q9H4L4 574 aaPredicted RBP24.3■■□□□ 1.48
LRMP-208ENST00000553398 PHF23Q9BUL5 403 aaPredicted RBP24.04■■□□□ 1.44
LRMP-208ENST00000553398 FOXD1Q16676 465 aa22.66■■□□□ 1.22
LRMP-208ENST00000553398 PLPPR3Q6T4P5 718 aa21.85■■□□□ 1.09
LRMP-208ENST00000553398 PPP6R1Q9UPN7 881 aa21.34■■□□□ 1.01
LRMP-208ENST00000553398 ADRA2BP18089 450 aa21.29■■□□□ 1
LRMP-208ENST00000553398 PIAS4Q8N2W9 510 aaPredicted RBP21.21■□□□□ 0.99
LRMP-208ENST00000553398 MSH5O43196 834 aa21.1■□□□□ 0.97
LRMP-208ENST00000553398 POTEDQ86YR6 584 aa20.34■□□□□ 0.85
LRMP-208ENST00000553398 MAPK8IP2Q13387 824 aaPredicted RBP19.51■□□□□ 0.71
LRMP-208ENST00000553398 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
LRMP-208ENST00000553398 DMRT2Q9Y5R5 561 aa19.3■□□□□ 0.68
LRMP-208ENST00000553398 PPP4R3CPQ6ZMV5 832 aa19.2■□□□□ 0.66
LRMP-208ENST00000553398 CNKSR2Q8WXI2 1034 aa18.78■□□□□ 0.6
LRMP-208ENST00000553398 HOXD11P31277 338 aaPredicted RBP18.65■□□□□ 0.58
LRMP-208ENST00000553398 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
LRMP-208ENST00000553398 DCAF8L1A6NGE4 600 aa18.54■□□□□ 0.56
LRMP-208ENST00000553398 NCBP3Q53F19 620 aaKnown RBP18.49■□□□□ 0.55
LRMP-208ENST00000553398 NPM3O75607 178 aaKnown RBP18.25■□□□□ 0.51
LRMP-208ENST00000553398 KCNA4P22459 653 aa18.06■□□□□ 0.48
LRMP-208ENST00000553398 RNF39Q9H2S5 420 aa18.04■□□□□ 0.48
LRMP-208ENST00000553398 CACNB1Q02641 598 aaPredicted RBP18.03■□□□□ 0.48
LRMP-208ENST00000553398 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
LRMP-208ENST00000553398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.8■□□□□ 0.44
LRMP-208ENST00000553398 C1QBPQ07021 282 aaKnown RBP17.77■□□□□ 0.44
LRMP-208ENST00000553398 U3KPZ7 1027 aaPredicted RBP17.44■□□□□ 0.38
LRMP-208ENST00000553398 SLC4A2P04920 1241 aa17.39■□□□□ 0.37
LRMP-208ENST00000553398 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
LRMP-208ENST00000553398 CAPN15O75808 1086 aa17.12■□□□□ 0.33
LRMP-208ENST00000553398 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
LRMP-208ENST00000553398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
LRMP-208ENST00000553398 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
LRMP-208ENST00000553398 DSG3P32926 999 aa16.96■□□□□ 0.31
LRMP-208ENST00000553398 APLP2Q06481 763 aa16.93■□□□□ 0.3
LRMP-208ENST00000553398 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
LRMP-208ENST00000553398 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
LRMP-208ENST00000553398 MYCNP04198 464 aaPredicted RBP16.85■□□□□ 0.29
LRMP-208ENST00000553398 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
LRMP-208ENST00000553398 FOXD4L1Q9NU39 408 aa16.77■□□□□ 0.28
LRMP-208ENST00000553398 ABCB7O75027 752 aa16.74■□□□□ 0.27
LRMP-208ENST00000553398 ZBTB22O15209 634 aa16.62■□□□□ 0.25
LRMP-208ENST00000553398 ATF5Q9Y2D1 282 aaPredicted RBP16.5■□□□□ 0.23
LRMP-208ENST00000553398 POLA2Q14181 598 aa16.47■□□□□ 0.23
LRMP-208ENST00000553398 ATXN8OSP0DMR3 200 aa16.23■□□□□ 0.19
LRMP-208ENST00000553398 RBM42Q9BTD8 480 aaKnown RBP16.14■□□□□ 0.17
LRMP-208ENST00000553398 ZBTB12Q9Y330 459 aaPredicted RBP16.09■□□□□ 0.17
LRMP-208ENST00000553398 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
LRMP-208ENST00000553398 POTEHQ6S545 545 aa15.97■□□□□ 0.15
LRMP-208ENST00000553398 OSCARQ8IYS5 282 aa15.93■□□□□ 0.14
LRMP-208ENST00000553398 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
LRMP-208ENST00000553398 AKT1S1Q96B36 256 aa15.83■□□□□ 0.12
LRMP-208ENST00000553398 FBLN2P98095 1184 aa15.8■□□□□ 0.12
LRMP-208ENST00000553398 CHRDL2Q6WN34 429 aa15.75■□□□□ 0.11
LRMP-208ENST00000553398 MKRN4PQ13434 485 aaPredicted RBP15.73■□□□□ 0.11
LRMP-208ENST00000553398 REM2Q8IYK8 340 aaPredicted RBP15.7■□□□□ 0.1
LRMP-208ENST00000553398 SPDYE2BA6NHP3 402 aa15.63■□□□□ 0.09
LRMP-208ENST00000553398 SPDYE6P0CI01 402 aa15.63■□□□□ 0.09
LRMP-208ENST00000553398 SPDYE2Q495Y8 402 aa15.63■□□□□ 0.09
LRMP-208ENST00000553398 PITPNM1O00562 1244 aa15.53■□□□□ 0.08
LRMP-208ENST00000553398 ZNF692Q9BU19 519 aaPredicted RBP15.5■□□□□ 0.07
LRMP-208ENST00000553398 SSUH2Q9Y2M2 353 aa15.44■□□□□ 0.06
LRMP-208ENST00000553398 PIP4P2Q8N4L2 257 aa15.42■□□□□ 0.06
LRMP-208ENST00000553398 FXR2P51116 673 aaKnown RBP eCLIP15.35■□□□□ 0.05
LRMP-208ENST00000553398 SPDYE1Q8NFV5 336 aaPredicted RBP15.32■□□□□ 0.04
LRMP-208ENST00000553398 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
LRMP-208ENST00000553398 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
LRMP-208ENST00000553398 PRKAR2AP13861 404 aaKnown RBP15.13■□□□□ 0.01
LRMP-208ENST00000553398 HAX1O00165 279 aa15.11■□□□□ 0.01
LRMP-208ENST00000553398 PRR29P0C7W0 189 aa15.08■□□□□ 0
LRMP-208ENST00000553398 SPDYE4A6NLX3 237 aa15.07■□□□□ 0
LRMP-208ENST00000553398 SP7Q8TDD2 431 aaPredicted RBP15.04■□□□□ -0
LRMP-208ENST00000553398 CHADLQ6NUI6 762 aa15.02■□□□□ -0
LRMP-208ENST00000553398 EVX2Q03828 476 aa14.96□□□□□ -0.01
LRMP-208ENST00000553398 STAG3Q9UJ98 1225 aa14.86□□□□□ -0.03
LRMP-208ENST00000553398 C19orf67A6NJJ6 358 aa14.85□□□□□ -0.03
LRMP-208ENST00000553398 FARP1Q9Y4F1 1045 aaPredicted RBP14.79□□□□□ -0.04
LRMP-208ENST00000553398 CREBZFQ9NS37 354 aa14.75□□□□□ -0.05
LRMP-208ENST00000553398 PROM2Q8N271 834 aa14.71□□□□□ -0.05
LRMP-208ENST00000553398 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
LRMP-208ENST00000553398 GABBR2O75899 941 aa14.6□□□□□ -0.07
LRMP-208ENST00000553398 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.09
LRMP-208ENST00000553398 FKBP8Q14318 412 aa14.51□□□□□ -0.09
LRMP-208ENST00000553398 ZRANB1Q9UGI0 708 aa14.49□□□□□ -0.09
LRMP-208ENST00000553398 NPM1P06748 294 aaKnown RBP eCLIP14.47□□□□□ -0.09
LRMP-208ENST00000553398 ZNF579Q8NAF0 562 aaKnown RBP14.42□□□□□ -0.1
LRMP-208ENST00000553398 CLCN6P51797 869 aa14.38□□□□□ -0.11
LRMP-208ENST00000553398 MIER1Q8N108 512 aa14.38□□□□□ -0.11
LRMP-208ENST00000553398 PAK3O75914 559 aaPredicted RBP14.37□□□□□ -0.11
LRMP-208ENST00000553398 PLEKHG5O94827 1062 aa14.31□□□□□ -0.12
LRMP-208ENST00000553398 PHF12Q96QT6 1004 aa14.31□□□□□ -0.12
LRMP-208ENST00000553398 POTEIP0CG38 1075 aa14.3□□□□□ -0.12
LRMP-208ENST00000553398 PLCD3Q8N3E9 789 aa14.27□□□□□ -0.13
LRMP-208ENST00000553398 GALR2O43603 387 aaPredicted RBP14.26□□□□□ -0.13
LRMP-208ENST00000553398 TSPYL2Q9H2G4 693 aaPredicted RBP14.25□□□□□ -0.13
LRMP-208ENST00000553398 DCBLD2Q96PD2 775 aa14.24□□□□□ -0.13
LRMP-208ENST00000553398 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
LRMP-208ENST00000553398 CCDC61Q9Y6R9 512 aa14.15□□□□□ -0.14
LRMP-208ENST00000553398 LHX8Q68G74 356 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms