RNA–Protein interactions for RNA: ENST00000553388.1

PSMD10-207, Transcript of proteasome 26S subunit, non-ATPase 10, humanhuman

TSL 1 (best)

Gene PSMD10, Length 1,039 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD10-207ENST00000553388 AEBP2Q6ZN18 517 aaPredicted RBP33.12■■■□□ 2.89
PSMD10-207ENST00000553388 CHIC1Q5VXU3 224 aa31.44■■■□□ 2.62
PSMD10-207ENST00000553388 SENP3Q9H4L4 574 aaPredicted RBP28.07■■■□□ 2.08
PSMD10-207ENST00000553388 PHF23Q9BUL5 403 aaPredicted RBP27.81■■■□□ 2.04
PSMD10-207ENST00000553388 FOXD1Q16676 465 aa26.27■■□□□ 1.8
PSMD10-207ENST00000553388 PLPPR3Q6T4P5 718 aa25.09■■□□□ 1.61
PSMD10-207ENST00000553388 PPP6R1Q9UPN7 881 aa24.69■■□□□ 1.54
PSMD10-207ENST00000553388 ADRA2BP18089 450 aa24.56■■□□□ 1.52
PSMD10-207ENST00000553388 PIAS4Q8N2W9 510 aaPredicted RBP24.47■■□□□ 1.51
PSMD10-207ENST00000553388 MSH5O43196 834 aa24.42■■□□□ 1.5
PSMD10-207ENST00000553388 POTEDQ86YR6 584 aa23.8■■□□□ 1.4
PSMD10-207ENST00000553388 MAPK8IP2Q13387 824 aaPredicted RBP22.59■■□□□ 1.21
PSMD10-207ENST00000553388 DMRT2Q9Y5R5 561 aa22.32■■□□□ 1.16
PSMD10-207ENST00000553388 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
PSMD10-207ENST00000553388 PPP4R3CPQ6ZMV5 832 aa22.06■■□□□ 1.12
PSMD10-207ENST00000553388 CNKSR2Q8WXI2 1034 aa21.59■■□□□ 1.05
PSMD10-207ENST00000553388 HOXD11P31277 338 aaPredicted RBP21.56■■□□□ 1.04
PSMD10-207ENST00000553388 RNF216Q9NWF9 866 aaPredicted RBP21.39■■□□□ 1.01
PSMD10-207ENST00000553388 DCAF8L1A6NGE4 600 aa21.33■■□□□ 1.01
PSMD10-207ENST00000553388 NCBP3Q53F19 620 aaKnown RBP21.13■□□□□ 0.97
PSMD10-207ENST00000553388 NPM3O75607 178 aaKnown RBP20.94■□□□□ 0.94
PSMD10-207ENST00000553388 CACNB1Q02641 598 aaPredicted RBP20.93■□□□□ 0.94
PSMD10-207ENST00000553388 RNF39Q9H2S5 420 aa20.93■□□□□ 0.94
PSMD10-207ENST00000553388 DNAJC5BQ9UF47 199 aa20.75■□□□□ 0.91
PSMD10-207ENST00000553388 KCNA4P22459 653 aa20.63■□□□□ 0.89
PSMD10-207ENST00000553388 C1QBPQ07021 282 aaKnown RBP20.57■□□□□ 0.88
PSMD10-207ENST00000553388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.46■□□□□ 0.87
PSMD10-207ENST00000553388 U3KPZ7 1027 aaPredicted RBP20.12■□□□□ 0.81
PSMD10-207ENST00000553388 SLC4A2P04920 1241 aa20.04■□□□□ 0.8
PSMD10-207ENST00000553388 SPINK5Q9NQ38 1064 aaPredicted RBP19.83■□□□□ 0.77
PSMD10-207ENST00000553388 CAPN15O75808 1086 aa19.69■□□□□ 0.74
PSMD10-207ENST00000553388 DSG3P32926 999 aa19.64■□□□□ 0.73
PSMD10-207ENST00000553388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
PSMD10-207ENST00000553388 HNRNPUL2Q1KMD3 747 aaKnown RBP19.43■□□□□ 0.7
PSMD10-207ENST00000553388 TRHP20396 242 aaPredicted RBP19.42■□□□□ 0.7
PSMD10-207ENST00000553388 SLC4A1APQ9BWU0 796 aaKnown RBP19.42■□□□□ 0.7
PSMD10-207ENST00000553388 APLP2Q06481 763 aa19.36■□□□□ 0.69
PSMD10-207ENST00000553388 SAMD1Q6SPF0 538 aaPredicted RBP19.36■□□□□ 0.69
PSMD10-207ENST00000553388 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
PSMD10-207ENST00000553388 ABCB7O75027 752 aa19.29■□□□□ 0.68
PSMD10-207ENST00000553388 MYCNP04198 464 aaPredicted RBP19.29■□□□□ 0.68
PSMD10-207ENST00000553388 FOXD4L1Q9NU39 408 aa19.15■□□□□ 0.66
PSMD10-207ENST00000553388 ZBTB22O15209 634 aa19.03■□□□□ 0.64
PSMD10-207ENST00000553388 ATF5Q9Y2D1 282 aaPredicted RBP19■□□□□ 0.63
PSMD10-207ENST00000553388 POLA2Q14181 598 aa18.95■□□□□ 0.62
PSMD10-207ENST00000553388 POTEHQ6S545 545 aa18.63■□□□□ 0.57
PSMD10-207ENST00000553388 RBM42Q9BTD8 480 aaKnown RBP18.6■□□□□ 0.57
PSMD10-207ENST00000553388 ATXN8OSP0DMR3 200 aa18.55■□□□□ 0.56
PSMD10-207ENST00000553388 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
PSMD10-207ENST00000553388 OSCARQ8IYS5 282 aa18.32■□□□□ 0.52
PSMD10-207ENST00000553388 AKT1S1Q96B36 256 aa18.26■□□□□ 0.51
PSMD10-207ENST00000553388 CHRDL2Q6WN34 429 aa18.24■□□□□ 0.51
PSMD10-207ENST00000553388 CSRNP3Q8WYN3 585 aa18.21■□□□□ 0.51
PSMD10-207ENST00000553388 REM2Q8IYK8 340 aaPredicted RBP18.13■□□□□ 0.49
PSMD10-207ENST00000553388 MKRN4PQ13434 485 aaPredicted RBP18.1■□□□□ 0.49
PSMD10-207ENST00000553388 FBLN2P98095 1184 aa18.04■□□□□ 0.48
PSMD10-207ENST00000553388 SPDYE2BA6NHP3 402 aa17.95■□□□□ 0.46
PSMD10-207ENST00000553388 SPDYE6P0CI01 402 aa17.95■□□□□ 0.46
PSMD10-207ENST00000553388 SPDYE2Q495Y8 402 aa17.95■□□□□ 0.46
PSMD10-207ENST00000553388 PITPNM1O00562 1244 aa17.93■□□□□ 0.46
PSMD10-207ENST00000553388 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
PSMD10-207ENST00000553388 PIP4P2Q8N4L2 257 aa17.86■□□□□ 0.45
PSMD10-207ENST00000553388 FXR2P51116 673 aaKnown RBP eCLIP17.78■□□□□ 0.44
PSMD10-207ENST00000553388 SSUH2Q9Y2M2 353 aa17.77■□□□□ 0.44
PSMD10-207ENST00000553388 ZNF692Q9BU19 519 aaPredicted RBP17.76■□□□□ 0.43
PSMD10-207ENST00000553388 SPDYE1Q8NFV5 336 aaPredicted RBP17.6■□□□□ 0.41
PSMD10-207ENST00000553388 CLEC11AQ9Y240 323 aa17.59■□□□□ 0.41
PSMD10-207ENST00000553388 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
PSMD10-207ENST00000553388 SP7Q8TDD2 431 aaPredicted RBP17.49■□□□□ 0.39
PSMD10-207ENST00000553388 HAX1O00165 279 aa17.47■□□□□ 0.39
PSMD10-207ENST00000553388 PRKAR2AP13861 404 aaKnown RBP17.44■□□□□ 0.38
PSMD10-207ENST00000553388 EVX2Q03828 476 aa17.41■□□□□ 0.38
PSMD10-207ENST00000553388 CHADLQ6NUI6 762 aa17.32■□□□□ 0.36
PSMD10-207ENST00000553388 PRR29P0C7W0 189 aa17.31■□□□□ 0.36
PSMD10-207ENST00000553388 C19orf67A6NJJ6 358 aa17.21■□□□□ 0.35
PSMD10-207ENST00000553388 SPDYE4A6NLX3 237 aa17.19■□□□□ 0.34
PSMD10-207ENST00000553388 FARP1Q9Y4F1 1045 aaPredicted RBP17.04■□□□□ 0.32
PSMD10-207ENST00000553388 STAG3Q9UJ98 1225 aa16.98■□□□□ 0.31
PSMD10-207ENST00000553388 CREBZFQ9NS37 354 aa16.97■□□□□ 0.31
PSMD10-207ENST00000553388 GABBR2O75899 941 aa16.93■□□□□ 0.3
PSMD10-207ENST00000553388 CD44P16070 742 aaKnown RBP16.88■□□□□ 0.29
PSMD10-207ENST00000553388 PROM2Q8N271 834 aa16.86■□□□□ 0.29
PSMD10-207ENST00000553388 MNX1P50219 401 aaPredicted RBP16.73■□□□□ 0.27
PSMD10-207ENST00000553388 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
PSMD10-207ENST00000553388 POTEIP0CG38 1075 aa16.65■□□□□ 0.26
PSMD10-207ENST00000553388 ZNF579Q8NAF0 562 aaKnown RBP16.64■□□□□ 0.25
PSMD10-207ENST00000553388 CLCN6P51797 869 aa16.58■□□□□ 0.24
PSMD10-207ENST00000553388 NPM1P06748 294 aaKnown RBP eCLIP16.54■□□□□ 0.24
PSMD10-207ENST00000553388 PHF12Q96QT6 1004 aa16.48■□□□□ 0.23
PSMD10-207ENST00000553388 GALR2O43603 387 aaPredicted RBP16.47■□□□□ 0.23
PSMD10-207ENST00000553388 PAK3O75914 559 aaPredicted RBP16.43■□□□□ 0.22
PSMD10-207ENST00000553388 FKBP8Q14318 412 aa16.42■□□□□ 0.22
PSMD10-207ENST00000553388 LHX8Q68G74 356 aa16.42■□□□□ 0.22
PSMD10-207ENST00000553388 DCBLD2Q96PD2 775 aa16.4■□□□□ 0.22
PSMD10-207ENST00000553388 MIER1Q8N108 512 aa16.38■□□□□ 0.21
PSMD10-207ENST00000553388 TSPYL2Q9H2G4 693 aaPredicted RBP16.32■□□□□ 0.2
PSMD10-207ENST00000553388 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
PSMD10-207ENST00000553388 MS4A3Q96HJ5 214 aa16.25■□□□□ 0.19
PSMD10-207ENST00000553388 RASEFQ8IZ41 740 aa16.24■□□□□ 0.19
PSMD10-207ENST00000553388 PLEKHG5O94827 1062 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms