RNA–Protein interactions for RNA: ENST00000553317.1

CCDC175-203, Transcript of coiled-coil domain containing 175, humanhuman

TSL 3

Gene CCDC175, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-203ENST00000553317 AEBP2Q6ZN18 517 aaPredicted RBP33.94■■■■□ 3.02
CCDC175-203ENST00000553317 CHIC1Q5VXU3 224 aa32.2■■■□□ 2.75
CCDC175-203ENST00000553317 SENP3Q9H4L4 574 aaPredicted RBP28.91■■■□□ 2.22
CCDC175-203ENST00000553317 PHF23Q9BUL5 403 aaPredicted RBP28.52■■■□□ 2.16
CCDC175-203ENST00000553317 FOXD1Q16676 465 aa26.96■■□□□ 1.91
CCDC175-203ENST00000553317 PLPPR3Q6T4P5 718 aa25.67■■□□□ 1.7
CCDC175-203ENST00000553317 MSH5O43196 834 aa25.22■■□□□ 1.63
CCDC175-203ENST00000553317 PPP6R1Q9UPN7 881 aa25.2■■□□□ 1.62
CCDC175-203ENST00000553317 PIAS4Q8N2W9 510 aaPredicted RBP25.1■■□□□ 1.61
CCDC175-203ENST00000553317 ADRA2BP18089 450 aa25.04■■□□□ 1.6
CCDC175-203ENST00000553317 POTEDQ86YR6 584 aa24.67■■□□□ 1.54
CCDC175-203ENST00000553317 MAPK8IP2Q13387 824 aaPredicted RBP23.02■■□□□ 1.28
CCDC175-203ENST00000553317 DMRT2Q9Y5R5 561 aa22.95■■□□□ 1.26
CCDC175-203ENST00000553317 SCAF1Q9H7N4 1312 aaKnown RBP22.92■■□□□ 1.26
CCDC175-203ENST00000553317 PPP4R3CPQ6ZMV5 832 aa22.48■■□□□ 1.19
CCDC175-203ENST00000553317 HOXD11P31277 338 aaPredicted RBP22.15■■□□□ 1.14
CCDC175-203ENST00000553317 CNKSR2Q8WXI2 1034 aa22.09■■□□□ 1.13
CCDC175-203ENST00000553317 RNF216Q9NWF9 866 aaPredicted RBP21.93■■□□□ 1.1
CCDC175-203ENST00000553317 DCAF8L1A6NGE4 600 aa21.77■■□□□ 1.08
CCDC175-203ENST00000553317 NCBP3Q53F19 620 aaKnown RBP21.58■■□□□ 1.05
CCDC175-203ENST00000553317 CACNB1Q02641 598 aaPredicted RBP21.57■■□□□ 1.04
CCDC175-203ENST00000553317 RNF39Q9H2S5 420 aa21.57■■□□□ 1.04
CCDC175-203ENST00000553317 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
CCDC175-203ENST00000553317 NPM3O75607 178 aaKnown RBP21.31■■□□□ 1
CCDC175-203ENST00000553317 C1QBPQ07021 282 aaKnown RBP21.23■□□□□ 0.99
CCDC175-203ENST00000553317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.91■□□□□ 0.94
CCDC175-203ENST00000553317 KCNA4P22459 653 aa20.86■□□□□ 0.93
CCDC175-203ENST00000553317 U3KPZ7 1027 aaPredicted RBP20.59■□□□□ 0.89
CCDC175-203ENST00000553317 SLC4A2P04920 1241 aa20.41■□□□□ 0.86
CCDC175-203ENST00000553317 SPINK5Q9NQ38 1064 aaPredicted RBP20.25■□□□□ 0.83
CCDC175-203ENST00000553317 DSG3P32926 999 aa20.16■□□□□ 0.82
CCDC175-203ENST00000553317 CAPN15O75808 1086 aa20.13■□□□□ 0.81
CCDC175-203ENST00000553317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.96■□□□□ 0.79
CCDC175-203ENST00000553317 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
CCDC175-203ENST00000553317 APLP2Q06481 763 aa19.95■□□□□ 0.78
CCDC175-203ENST00000553317 ZNF219Q9P2Y4 722 aaPredicted RBP19.86■□□□□ 0.77
CCDC175-203ENST00000553317 SAMD1Q6SPF0 538 aaPredicted RBP19.85■□□□□ 0.77
CCDC175-203ENST00000553317 TRHP20396 242 aaPredicted RBP19.8■□□□□ 0.76
CCDC175-203ENST00000553317 MYCNP04198 464 aaPredicted RBP19.7■□□□□ 0.74
CCDC175-203ENST00000553317 ABCB7O75027 752 aa19.66■□□□□ 0.74
CCDC175-203ENST00000553317 SLC4A1APQ9BWU0 796 aaKnown RBP19.65■□□□□ 0.74
CCDC175-203ENST00000553317 FOXD4L1Q9NU39 408 aa19.48■□□□□ 0.71
CCDC175-203ENST00000553317 POLA2Q14181 598 aa19.33■□□□□ 0.68
CCDC175-203ENST00000553317 POTEHQ6S545 545 aa19.3■□□□□ 0.68
CCDC175-203ENST00000553317 ATF5Q9Y2D1 282 aaPredicted RBP19.26■□□□□ 0.67
CCDC175-203ENST00000553317 ZBTB22O15209 634 aa19.22■□□□□ 0.67
CCDC175-203ENST00000553317 RBM42Q9BTD8 480 aaKnown RBP19.2■□□□□ 0.66
CCDC175-203ENST00000553317 ZBTB12Q9Y330 459 aaPredicted RBP18.97■□□□□ 0.63
CCDC175-203ENST00000553317 ATXN8OSP0DMR3 200 aa18.96■□□□□ 0.63
CCDC175-203ENST00000553317 CHRDL2Q6WN34 429 aa18.78■□□□□ 0.6
CCDC175-203ENST00000553317 AKT1S1Q96B36 256 aa18.78■□□□□ 0.6
CCDC175-203ENST00000553317 OSCARQ8IYS5 282 aa18.71■□□□□ 0.59
CCDC175-203ENST00000553317 REM2Q8IYK8 340 aaPredicted RBP18.58■□□□□ 0.56
CCDC175-203ENST00000553317 FBLN2P98095 1184 aa18.43■□□□□ 0.54
CCDC175-203ENST00000553317 SPDYE2BA6NHP3 402 aa18.41■□□□□ 0.54
CCDC175-203ENST00000553317 SPDYE6P0CI01 402 aa18.41■□□□□ 0.54
CCDC175-203ENST00000553317 SPDYE2Q495Y8 402 aa18.41■□□□□ 0.54
CCDC175-203ENST00000553317 MKRN4PQ13434 485 aaPredicted RBP18.4■□□□□ 0.54
CCDC175-203ENST00000553317 PITPNM1O00562 1244 aa18.38■□□□□ 0.53
CCDC175-203ENST00000553317 PIP4P2Q8N4L2 257 aa18.35■□□□□ 0.53
CCDC175-203ENST00000553317 EHMT2Q96KQ7 1210 aa18.32■□□□□ 0.52
CCDC175-203ENST00000553317 CSRNP3Q8WYN3 585 aa18.3■□□□□ 0.52
CCDC175-203ENST00000553317 FXR2P51116 673 aaKnown RBP eCLIP18.29■□□□□ 0.52
CCDC175-203ENST00000553317 SSUH2Q9Y2M2 353 aa18.22■□□□□ 0.51
CCDC175-203ENST00000553317 ZNF692Q9BU19 519 aaPredicted RBP18.1■□□□□ 0.49
CCDC175-203ENST00000553317 SP7Q8TDD2 431 aaPredicted RBP18.09■□□□□ 0.49
CCDC175-203ENST00000553317 SPDYE1Q8NFV5 336 aaPredicted RBP18.05■□□□□ 0.48
CCDC175-203ENST00000553317 HAX1O00165 279 aa17.92■□□□□ 0.46
CCDC175-203ENST00000553317 CLEC11AQ9Y240 323 aa17.9■□□□□ 0.46
CCDC175-203ENST00000553317 PRKAR2AP13861 404 aaKnown RBP17.86■□□□□ 0.45
CCDC175-203ENST00000553317 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
CCDC175-203ENST00000553317 EVX2Q03828 476 aa17.81■□□□□ 0.44
CCDC175-203ENST00000553317 C19orf67A6NJJ6 358 aa17.7■□□□□ 0.42
CCDC175-203ENST00000553317 PRR29P0C7W0 189 aa17.67■□□□□ 0.42
CCDC175-203ENST00000553317 CHADLQ6NUI6 762 aa17.63■□□□□ 0.41
CCDC175-203ENST00000553317 SPDYE4A6NLX3 237 aa17.44■□□□□ 0.38
CCDC175-203ENST00000553317 FARP1Q9Y4F1 1045 aaPredicted RBP17.43■□□□□ 0.38
CCDC175-203ENST00000553317 GABBR2O75899 941 aa17.39■□□□□ 0.37
CCDC175-203ENST00000553317 STAG3Q9UJ98 1225 aa17.39■□□□□ 0.37
CCDC175-203ENST00000553317 CREBZFQ9NS37 354 aa17.32■□□□□ 0.36
CCDC175-203ENST00000553317 CD44P16070 742 aaKnown RBP17.29■□□□□ 0.36
CCDC175-203ENST00000553317 PROM2Q8N271 834 aa17.2■□□□□ 0.34
CCDC175-203ENST00000553317 CLCN6P51797 869 aa17.18■□□□□ 0.34
CCDC175-203ENST00000553317 ZNF579Q8NAF0 562 aaKnown RBP17.11■□□□□ 0.33
CCDC175-203ENST00000553317 POTEIP0CG38 1075 aa17.08■□□□□ 0.32
CCDC175-203ENST00000553317 MNX1P50219 401 aaPredicted RBP17.08■□□□□ 0.32
CCDC175-203ENST00000553317 ZRANB1Q9UGI0 708 aa17.02■□□□□ 0.32
CCDC175-203ENST00000553317 LHX8Q68G74 356 aa16.94■□□□□ 0.3
CCDC175-203ENST00000553317 NPM1P06748 294 aaKnown RBP eCLIP16.93■□□□□ 0.3
CCDC175-203ENST00000553317 GALR2O43603 387 aaPredicted RBP16.84■□□□□ 0.29
CCDC175-203ENST00000553317 PAK3O75914 559 aaPredicted RBP16.84■□□□□ 0.29
CCDC175-203ENST00000553317 DCBLD2Q96PD2 775 aa16.83■□□□□ 0.28
CCDC175-203ENST00000553317 PHF12Q96QT6 1004 aa16.8■□□□□ 0.28
CCDC175-203ENST00000553317 CCDC61Q9Y6R9 512 aa16.64■□□□□ 0.25
CCDC175-203ENST00000553317 MS4A3Q96HJ5 214 aa16.6■□□□□ 0.25
CCDC175-203ENST00000553317 MIER1Q8N108 512 aa16.58■□□□□ 0.24
CCDC175-203ENST00000553317 ASTLQ6HA08 431 aaPredicted RBP16.57■□□□□ 0.24
CCDC175-203ENST00000553317 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
CCDC175-203ENST00000553317 TSPYL2Q9H2G4 693 aaPredicted RBP16.56■□□□□ 0.24
CCDC175-203ENST00000553317 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms