RNA–Protein interactions for RNA: ENST00000553209.1

EIF4B-214, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 2

Gene EIF4B, Length 380 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-214ENST00000553209 AEBP2Q6ZN18 517 aaPredicted RBP12.21□□□□□ -0.45
EIF4B-214ENST00000553209 CHIC1Q5VXU3 224 aa11.79□□□□□ -0.52
EIF4B-214ENST00000553209 SENP3Q9H4L4 574 aaPredicted RBP10.4□□□□□ -0.74
EIF4B-214ENST00000553209 PHF23Q9BUL5 403 aaPredicted RBP10.35□□□□□ -0.75
EIF4B-214ENST00000553209 FOXD1Q16676 465 aa9.66□□□□□ -0.86
EIF4B-214ENST00000553209 PLPPR3Q6T4P5 718 aa9.5□□□□□ -0.89
EIF4B-214ENST00000553209 PPP6R1Q9UPN7 881 aa9.18□□□□□ -0.94
EIF4B-214ENST00000553209 ADRA2BP18089 450 aa9.15□□□□□ -0.94
EIF4B-214ENST00000553209 PIAS4Q8N2W9 510 aaPredicted RBP9.05□□□□□ -0.96
EIF4B-214ENST00000553209 MSH5O43196 834 aa8.99□□□□□ -0.97
EIF4B-214ENST00000553209 POTEDQ86YR6 584 aa8.45□□□□□ -1.06
EIF4B-214ENST00000553209 SCAF1Q9H7N4 1312 aaKnown RBP8.41□□□□□ -1.06
EIF4B-214ENST00000553209 MAPK8IP2Q13387 824 aaPredicted RBP8.35□□□□□ -1.07
EIF4B-214ENST00000553209 PPP4R3CPQ6ZMV5 832 aa8.35□□□□□ -1.07
EIF4B-214ENST00000553209 DMRT2Q9Y5R5 561 aa8.28□□□□□ -1.08
EIF4B-214ENST00000553209 CNKSR2Q8WXI2 1034 aa8.16□□□□□ -1.1
EIF4B-214ENST00000553209 NCBP3Q53F19 620 aaKnown RBP8.09□□□□□ -1.11
EIF4B-214ENST00000553209 HOXD11P31277 338 aaPredicted RBP8.07□□□□□ -1.12
EIF4B-214ENST00000553209 RNF216Q9NWF9 866 aaPredicted RBP8.05□□□□□ -1.12
EIF4B-214ENST00000553209 NPM3O75607 178 aaKnown RBP7.95□□□□□ -1.14
EIF4B-214ENST00000553209 KCNA4P22459 653 aa7.95□□□□□ -1.14
EIF4B-214ENST00000553209 DCAF8L1A6NGE4 600 aa7.87□□□□□ -1.15
EIF4B-214ENST00000553209 DNAJC5BQ9UF47 199 aa7.83□□□□□ -1.16
EIF4B-214ENST00000553209 RNF39Q9H2S5 420 aa7.69□□□□□ -1.18
EIF4B-214ENST00000553209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.65□□□□□ -1.183e-11■■□□□ 11.6
EIF4B-214ENST00000553209 C1QBPQ07021 282 aaKnown RBP7.6□□□□□ -1.19
EIF4B-214ENST00000553209 CACNB1Q02641 598 aaPredicted RBP7.58□□□□□ -1.2
EIF4B-214ENST00000553209 SLC4A2P04920 1241 aa7.56□□□□□ -1.2
EIF4B-214ENST00000553209 SLC4A1APQ9BWU0 796 aaKnown RBP7.54□□□□□ -1.2
EIF4B-214ENST00000553209 U3KPZ7 1027 aaPredicted RBP7.51□□□□□ -1.21
EIF4B-214ENST00000553209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.39□□□□□ -1.23
EIF4B-214ENST00000553209 HNRNPUL2Q1KMD3 747 aaKnown RBP7.39□□□□□ -1.23
EIF4B-214ENST00000553209 FOXD4L1Q9NU39 408 aa7.38□□□□□ -1.23
EIF4B-214ENST00000553209 MYCNP04198 464 aaPredicted RBP7.35□□□□□ -1.23
EIF4B-214ENST00000553209 APLP2Q06481 763 aa7.35□□□□□ -1.23
EIF4B-214ENST00000553209 SAMD1Q6SPF0 538 aaPredicted RBP7.34□□□□□ -1.23
EIF4B-214ENST00000553209 SPINK5Q9NQ38 1064 aaPredicted RBP7.33□□□□□ -1.24
EIF4B-214ENST00000553209 CAPN15O75808 1086 aa7.31□□□□□ -1.24
EIF4B-214ENST00000553209 ZBTB22O15209 634 aa7.3□□□□□ -1.24
EIF4B-214ENST00000553209 DSG3P32926 999 aa7.26□□□□□ -1.25
EIF4B-214ENST00000553209 ZNF219Q9P2Y4 722 aaPredicted RBP7.25□□□□□ -1.25
EIF4B-214ENST00000553209 TRHP20396 242 aaPredicted RBP7.23□□□□□ -1.25
EIF4B-214ENST00000553209 ATXN8OSP0DMR3 200 aa7.17□□□□□ -1.26
EIF4B-214ENST00000553209 CSRNP3Q8WYN3 585 aa7.16□□□□□ -1.26
EIF4B-214ENST00000553209 EHMT2Q96KQ7 1210 aa7.16□□□□□ -1.26
EIF4B-214ENST00000553209 ATF5Q9Y2D1 282 aaPredicted RBP7.15□□□□□ -1.26
EIF4B-214ENST00000553209 ABCB7O75027 752 aa7.13□□□□□ -1.27
EIF4B-214ENST00000553209 POLA2Q14181 598 aa7.11□□□□□ -1.27
EIF4B-214ENST00000553209 ZBTB12Q9Y330 459 aaPredicted RBP6.98□□□□□ -1.29
EIF4B-214ENST00000553209 RBM42Q9BTD8 480 aaKnown RBP6.92□□□□□ -1.3
EIF4B-214ENST00000553209 FBLN2P98095 1184 aa6.87□□□□□ -1.31
EIF4B-214ENST00000553209 MKRN4PQ13434 485 aaPredicted RBP6.85□□□□□ -1.31
EIF4B-214ENST00000553209 OSCARQ8IYS5 282 aa6.83□□□□□ -1.32
EIF4B-214ENST00000553209 AKT1S1Q96B36 256 aa6.81□□□□□ -1.32
EIF4B-214ENST00000553209 SPDYE2BA6NHP3 402 aa6.78□□□□□ -1.32
EIF4B-214ENST00000553209 SPDYE6P0CI01 402 aa6.78□□□□□ -1.32
EIF4B-214ENST00000553209 SPDYE2Q495Y8 402 aa6.78□□□□□ -1.32
EIF4B-214ENST00000553209 REM2Q8IYK8 340 aaPredicted RBP6.73□□□□□ -1.33
EIF4B-214ENST00000553209 ZNF692Q9BU19 519 aaPredicted RBP6.73□□□□□ -1.33
EIF4B-214ENST00000553209 SSUH2Q9Y2M2 353 aa6.71□□□□□ -1.34
EIF4B-214ENST00000553209 CHRDL2Q6WN34 429 aa6.68□□□□□ -1.34
EIF4B-214ENST00000553209 POTEHQ6S545 545 aa6.66□□□□□ -1.34
EIF4B-214ENST00000553209 PITPNM1O00562 1244 aa6.63□□□□□ -1.35
EIF4B-214ENST00000553209 PABPN1Q86U42 306 aaKnown RBP eCLIP6.62□□□□□ -1.35
EIF4B-214ENST00000553209 SPDYE1Q8NFV5 336 aaPredicted RBP6.62□□□□□ -1.35
EIF4B-214ENST00000553209 SPDYE4A6NLX3 237 aa6.61□□□□□ -1.35
EIF4B-214ENST00000553209 FXR2P51116 673 aaKnown RBP eCLIP6.58□□□□□ -1.36
EIF4B-214ENST00000553209 CLEC11AQ9Y240 323 aa6.57□□□□□ -1.36
EIF4B-214ENST00000553209 PIP4P2Q8N4L2 257 aa6.56□□□□□ -1.36
EIF4B-214ENST00000553209 PRR29P0C7W0 189 aa6.52□□□□□ -1.37
EIF4B-214ENST00000553209 STAG3Q9UJ98 1225 aa6.52□□□□□ -1.37
EIF4B-214ENST00000553209 PROM2Q8N271 834 aa6.51□□□□□ -1.37
EIF4B-214ENST00000553209 PRKAR2AP13861 404 aaKnown RBP6.47□□□□□ -1.37
EIF4B-214ENST00000553209 FKBP8Q14318 412 aa6.44□□□□□ -1.38
EIF4B-214ENST00000553209 CHADLQ6NUI6 762 aa6.42□□□□□ -1.38
EIF4B-214ENST00000553209 CREBZFQ9NS37 354 aa6.4□□□□□ -1.38
EIF4B-214ENST00000553209 HAX1O00165 279 aa6.39□□□□□ -1.39
EIF4B-214ENST00000553209 FARP1Q9Y4F1 1045 aaPredicted RBP6.38□□□□□ -1.39
EIF4B-214ENST00000553209 C19orf67A6NJJ6 358 aa6.36□□□□□ -1.39
EIF4B-214ENST00000553209 EVX2Q03828 476 aa6.34□□□□□ -1.39
EIF4B-214ENST00000553209 SP7Q8TDD2 431 aaPredicted RBP6.33□□□□□ -1.4
EIF4B-214ENST00000553209 MNX1P50219 401 aaPredicted RBP6.32□□□□□ -1.4
EIF4B-214ENST00000553209 NPM1P06748 294 aaKnown RBP eCLIP6.3□□□□□ -1.4
EIF4B-214ENST00000553209 MIER1Q8N108 512 aa6.3□□□□□ -1.4
EIF4B-214ENST00000553209 FBXO3Q9UK99 471 aa6.3□□□□□ -1.4
EIF4B-214ENST00000553209 PLEKHG5O94827 1062 aa6.27□□□□□ -1.41
EIF4B-214ENST00000553209 CD44P16070 742 aaKnown RBP6.27□□□□□ -1.41
EIF4B-214ENST00000553209 PLCD3Q8N3E9 789 aa6.24□□□□□ -1.41
EIF4B-214ENST00000553209 CLCN6P51797 869 aa6.23□□□□□ -1.41
EIF4B-214ENST00000553209 GABBR2O75899 941 aa6.22□□□□□ -1.41
EIF4B-214ENST00000553209 ZBTB47Q9UFB7 747 aaPredicted RBP6.22□□□□□ -1.41
EIF4B-214ENST00000553209 ZRANB1Q9UGI0 708 aa6.21□□□□□ -1.42
EIF4B-214ENST00000553209 PAK3O75914 559 aaPredicted RBP6.2□□□□□ -1.42
EIF4B-214ENST00000553209 ZNF579Q8NAF0 562 aaKnown RBP6.2□□□□□ -1.42
EIF4B-214ENST00000553209 VASPP50552 380 aaPredicted RBP6.18□□□□□ -1.42
EIF4B-214ENST00000553209 NUBP1P53384 320 aa6.17□□□□□ -1.42
EIF4B-214ENST00000553209 RASEFQ8IZ41 740 aa6.15□□□□□ -1.42
EIF4B-214ENST00000553209 TSPYL2Q9H2G4 693 aaPredicted RBP6.15□□□□□ -1.42
EIF4B-214ENST00000553209 CCDC61Q9Y6R9 512 aa6.14□□□□□ -1.43
EIF4B-214ENST00000553209 KLHL34Q8N239 644 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms