RNA–Protein interactions for RNA: ENST00000553170.1

CR383658.1-202, humanhuman

TSL 3

Gene CR383658.1, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383658.1-202ENST00000553170 AEBP2Q6ZN18 517 aaPredicted RBP15.99■□□□□ 0.15
CR383658.1-202ENST00000553170 CHIC1Q5VXU3 224 aa15.92■□□□□ 0.14
CR383658.1-202ENST00000553170 PHF23Q9BUL5 403 aaPredicted RBP13.92□□□□□ -0.18
CR383658.1-202ENST00000553170 SENP3Q9H4L4 574 aaPredicted RBP13.73□□□□□ -0.21
CR383658.1-202ENST00000553170 PLPPR3Q6T4P5 718 aa13.11□□□□□ -0.31
CR383658.1-202ENST00000553170 FOXD1Q16676 465 aa12.59□□□□□ -0.39
CR383658.1-202ENST00000553170 ADRA2BP18089 450 aa12.27□□□□□ -0.45
CR383658.1-202ENST00000553170 PPP6R1Q9UPN7 881 aa12.2□□□□□ -0.46
CR383658.1-202ENST00000553170 PIAS4Q8N2W9 510 aaPredicted RBP12.03□□□□□ -0.48
CR383658.1-202ENST00000553170 MSH5O43196 834 aa11.68□□□□□ -0.54
CR383658.1-202ENST00000553170 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
CR383658.1-202ENST00000553170 KCNA4P22459 653 aa11.43□□□□□ -0.58
CR383658.1-202ENST00000553170 SCAF1Q9H7N4 1312 aaKnown RBP11.42□□□□□ -0.58
CR383658.1-202ENST00000553170 NCBP3Q53F19 620 aaKnown RBP11.41□□□□□ -0.58
CR383658.1-202ENST00000553170 POTEDQ86YR6 584 aa11.28□□□□□ -0.6
CR383658.1-202ENST00000553170 CNKSR2Q8WXI2 1034 aa11.19□□□□□ -0.62
CR383658.1-202ENST00000553170 NPM3O75607 178 aaKnown RBP11.08□□□□□ -0.64
CR383658.1-202ENST00000553170 MAPK8IP2Q13387 824 aaPredicted RBP11.03□□□□□ -0.64
CR383658.1-202ENST00000553170 SLC4A1APQ9BWU0 796 aaKnown RBP11.02□□□□□ -0.65
CR383658.1-202ENST00000553170 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
CR383658.1-202ENST00000553170 DMRT2Q9Y5R5 561 aa10.92□□□□□ -0.66
CR383658.1-202ENST00000553170 RNF216Q9NWF9 866 aaPredicted RBP10.91□□□□□ -0.66
CR383658.1-202ENST00000553170 HOXD11P31277 338 aaPredicted RBP10.76□□□□□ -0.69
CR383658.1-202ENST00000553170 DNAJC5BQ9UF47 199 aa10.72□□□□□ -0.69
CR383658.1-202ENST00000553170 CSRNP3Q8WYN3 585 aa10.61□□□□□ -0.71
CR383658.1-202ENST00000553170 DCAF8L1A6NGE4 600 aa10.57□□□□□ -0.72
CR383658.1-202ENST00000553170 FOXD4L1Q9NU39 408 aa10.56□□□□□ -0.72
CR383658.1-202ENST00000553170 ZBTB22O15209 634 aa10.45□□□□□ -0.74
CR383658.1-202ENST00000553170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.37□□□□□ -0.75
CR383658.1-202ENST00000553170 SLC4A2P04920 1241 aa10.35□□□□□ -0.75
CR383658.1-202ENST00000553170 MYCNP04198 464 aaPredicted RBP10.33□□□□□ -0.76
CR383658.1-202ENST00000553170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.24□□□□□ -0.77
CR383658.1-202ENST00000553170 HNRNPUL2Q1KMD3 747 aaKnown RBP10.24□□□□□ -0.77
CR383658.1-202ENST00000553170 ATXN8OSP0DMR3 200 aa10.18□□□□□ -0.78
CR383658.1-202ENST00000553170 SAMD1Q6SPF0 538 aaPredicted RBP10.17□□□□□ -0.78
CR383658.1-202ENST00000553170 APLP2Q06481 763 aa10.14□□□□□ -0.79
CR383658.1-202ENST00000553170 U3KPZ7 1027 aaPredicted RBP10.11□□□□□ -0.79
CR383658.1-202ENST00000553170 RNF39Q9H2S5 420 aa9.93□□□□□ -0.82
CR383658.1-202ENST00000553170 C1QBPQ07021 282 aaKnown RBP9.89□□□□□ -0.83
CR383658.1-202ENST00000553170 ZNF219Q9P2Y4 722 aaPredicted RBP9.87□□□□□ -0.83
CR383658.1-202ENST00000553170 ATF5Q9Y2D1 282 aaPredicted RBP9.86□□□□□ -0.83
CR383658.1-202ENST00000553170 CAPN15O75808 1086 aa9.83□□□□□ -0.84
CR383658.1-202ENST00000553170 TRHP20396 242 aaPredicted RBP9.81□□□□□ -0.84
CR383658.1-202ENST00000553170 SPINK5Q9NQ38 1064 aaPredicted RBP9.75□□□□□ -0.85
CR383658.1-202ENST00000553170 FKBP8Q14318 412 aa9.69□□□□□ -0.86
CR383658.1-202ENST00000553170 FBLN2P98095 1184 aa9.68□□□□□ -0.86
CR383658.1-202ENST00000553170 CACNB1Q02641 598 aaPredicted RBP9.67□□□□□ -0.86
CR383658.1-202ENST00000553170 POLA2Q14181 598 aa9.65□□□□□ -0.86
CR383658.1-202ENST00000553170 ZBTB12Q9Y330 459 aaPredicted RBP9.65□□□□□ -0.86
CR383658.1-202ENST00000553170 ABCB7O75027 752 aa9.6□□□□□ -0.87
CR383658.1-202ENST00000553170 DSG3P32926 999 aa9.51□□□□□ -0.89
CR383658.1-202ENST00000553170 SPDYE4A6NLX3 237 aa9.49□□□□□ -0.89
CR383658.1-202ENST00000553170 MKRN4PQ13434 485 aaPredicted RBP9.47□□□□□ -0.89
CR383658.1-202ENST00000553170 FBXO3Q9UK99 471 aa9.38□□□□□ -0.91
CR383658.1-202ENST00000553170 SPDYE2BA6NHP3 402 aa9.33□□□□□ -0.92
CR383658.1-202ENST00000553170 SPDYE6P0CI01 402 aa9.33□□□□□ -0.92
CR383658.1-202ENST00000553170 SPDYE2Q495Y8 402 aa9.33□□□□□ -0.92
CR383658.1-202ENST00000553170 OSCARQ8IYS5 282 aa9.32□□□□□ -0.92
CR383658.1-202ENST00000553170 ZNF692Q9BU19 519 aaPredicted RBP9.32□□□□□ -0.92
CR383658.1-202ENST00000553170 AMER1Q5JTC6 1135 aaPredicted RBP9.25□□□□□ -0.93
CR383658.1-202ENST00000553170 PROM2Q8N271 834 aa9.25□□□□□ -0.93
CR383658.1-202ENST00000553170 RBM42Q9BTD8 480 aaKnown RBP9.22□□□□□ -0.93
CR383658.1-202ENST00000553170 SSUH2Q9Y2M2 353 aa9.2□□□□□ -0.94
CR383658.1-202ENST00000553170 PABPN1Q86U42 306 aaKnown RBP eCLIP9.18□□□□□ -0.94
CR383658.1-202ENST00000553170 VASPP50552 380 aaPredicted RBP9.16□□□□□ -0.94
CR383658.1-202ENST00000553170 STAG3Q9UJ98 1225 aa9.16□□□□□ -0.94
CR383658.1-202ENST00000553170 RTN4Q9NQC3 1192 aaKnown RBP9.1□□□□□ -0.95
CR383658.1-202ENST00000553170 PLEKHG5O94827 1062 aa9.09□□□□□ -0.95
CR383658.1-202ENST00000553170 AKT1S1Q96B36 256 aa9.07□□□□□ -0.96
CR383658.1-202ENST00000553170 PLCD3Q8N3E9 789 aa9.06□□□□□ -0.96
CR383658.1-202ENST00000553170 KLHL34Q8N239 644 aa9.04□□□□□ -0.96
CR383658.1-202ENST00000553170 SPDYE1Q8NFV5 336 aaPredicted RBP9.03□□□□□ -0.96
CR383658.1-202ENST00000553170 MIER1Q8N108 512 aa9.01□□□□□ -0.97
CR383658.1-202ENST00000553170 ZBTB47Q9UFB7 747 aaPredicted RBP9.01□□□□□ -0.97
CR383658.1-202ENST00000553170 CLEC11AQ9Y240 323 aa8.97□□□□□ -0.97
CR383658.1-202ENST00000553170 IFNLR1Q8IU57 520 aaPredicted RBP8.96□□□□□ -0.98
CR383658.1-202ENST00000553170 SPOCK2Q92563 424 aa8.94□□□□□ -0.98
CR383658.1-202ENST00000553170 REM2Q8IYK8 340 aaPredicted RBP8.93□□□□□ -0.98
CR383658.1-202ENST00000553170 PRR29P0C7W0 189 aa8.92□□□□□ -0.98
CR383658.1-202ENST00000553170 PITPNM1O00562 1244 aa8.83□□□□□ -1
CR383658.1-202ENST00000553170 DCAF8L2P0C7V8 631 aa8.83□□□□□ -1
CR383658.1-202ENST00000553170 CIZ1Q9ULV3 898 aaPredicted RBP8.79□□□□□ -1
CR383658.1-202ENST00000553170 POTEHQ6S545 545 aa8.78□□□□□ -1
CR383658.1-202ENST00000553170 ECM2O94769 699 aaPredicted RBP8.76□□□□□ -1.01
CR383658.1-202ENST00000553170 NPM1P06748 294 aaKnown RBP eCLIP8.76□□□□□ -1.01
CR383658.1-202ENST00000553170 GSE1Q14687 1217 aa8.75□□□□□ -1.01
CR383658.1-202ENST00000553170 TRIM41Q8WV44 630 aa8.75□□□□□ -1.01
CR383658.1-202ENST00000553170 CREBZFQ9NS37 354 aa8.74□□□□□ -1.01
CR383658.1-202ENST00000553170 PKD2Q13563 968 aa8.73□□□□□ -1.01
CR383658.1-202ENST00000553170 FAM212AQ96EL1 285 aa8.73□□□□□ -1.01
CR383658.1-202ENST00000553170 DCAF8Q5TAQ9 597 aa8.69□□□□□ -1.02
CR383658.1-202ENST00000553170 SLC24A1O60721 1099 aa8.66□□□□□ -1.02
CR383658.1-202ENST00000553170 CHRDL2Q6WN34 429 aa8.66□□□□□ -1.02
CR383658.1-202ENST00000553170 PRKAR2AP13861 404 aaKnown RBP8.65□□□□□ -1.02
CR383658.1-202ENST00000553170 NUBP1P53384 320 aa8.65□□□□□ -1.02
CR383658.1-202ENST00000553170 TAOK2Q9UL54 1235 aa8.65□□□□□ -1.02
CR383658.1-202ENST00000553170 CHADLQ6NUI6 762 aa8.64□□□□□ -1.03
CR383658.1-202ENST00000553170 MNX1P50219 401 aaPredicted RBP8.62□□□□□ -1.03
CR383658.1-202ENST00000553170 PAK3O75914 559 aaPredicted RBP8.61□□□□□ -1.03
CR383658.1-202ENST00000553170 FARP1Q9Y4F1 1045 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms