RNA–Protein interactions for RNA: ENST00000553109.1

APPL2-216, Transcript of adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2, humanhuman

TSL 3

Gene APPL2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPL2-216ENST00000553109 AEBP2Q6ZN18 517 aaPredicted RBP24.17■■□□□ 1.46
APPL2-216ENST00000553109 CHIC1Q5VXU3 224 aa22.94■■□□□ 1.26
APPL2-216ENST00000553109 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
APPL2-216ENST00000553109 PHF23Q9BUL5 403 aaPredicted RBP20.27■□□□□ 0.84
APPL2-216ENST00000553109 FOXD1Q16676 465 aa19.16■□□□□ 0.66
APPL2-216ENST00000553109 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
APPL2-216ENST00000553109 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
APPL2-216ENST00000553109 ADRA2BP18089 450 aa17.91■□□□□ 0.46
APPL2-216ENST00000553109 PIAS4Q8N2W9 510 aaPredicted RBP17.91■□□□□ 0.46
APPL2-216ENST00000553109 MSH5O43196 834 aa17.85■□□□□ 0.45
APPL2-216ENST00000553109 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
APPL2-216ENST00000553109 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
APPL2-216ENST00000553109 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
APPL2-216ENST00000553109 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
APPL2-216ENST00000553109 PPP4R3CPQ6ZMV5 832 aa16.08■□□□□ 0.16
APPL2-216ENST00000553109 CNKSR2Q8WXI2 1034 aa15.74■□□□□ 0.11
APPL2-216ENST00000553109 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
APPL2-216ENST00000553109 DCAF8L1A6NGE4 600 aa15.61■□□□□ 0.09
APPL2-216ENST00000553109 RNF216Q9NWF9 866 aaPredicted RBP15.59■□□□□ 0.09
APPL2-216ENST00000553109 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
APPL2-216ENST00000553109 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
APPL2-216ENST00000553109 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
APPL2-216ENST00000553109 RNF39Q9H2S5 420 aa15.27■□□□□ 0.04
APPL2-216ENST00000553109 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
APPL2-216ENST00000553109 KCNA4P22459 653 aa15.06■□□□□ 0
APPL2-216ENST00000553109 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
APPL2-216ENST00000553109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
APPL2-216ENST00000553109 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
APPL2-216ENST00000553109 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
APPL2-216ENST00000553109 SPINK5Q9NQ38 1064 aaPredicted RBP14.48□□□□□ -0.09
APPL2-216ENST00000553109 CAPN15O75808 1086 aa14.4□□□□□ -0.1
APPL2-216ENST00000553109 DSG3P32926 999 aa14.33□□□□□ -0.12
APPL2-216ENST00000553109 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
APPL2-216ENST00000553109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.18□□□□□ -0.14
APPL2-216ENST00000553109 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
APPL2-216ENST00000553109 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
APPL2-216ENST00000553109 APLP2Q06481 763 aa14.16□□□□□ -0.14
APPL2-216ENST00000553109 SAMD1Q6SPF0 538 aaPredicted RBP14.14□□□□□ -0.15
APPL2-216ENST00000553109 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
APPL2-216ENST00000553109 ABCB7O75027 752 aa14.12□□□□□ -0.15
APPL2-216ENST00000553109 MYCNP04198 464 aaPredicted RBP14.1□□□□□ -0.15
APPL2-216ENST00000553109 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
APPL2-216ENST00000553109 ZBTB22O15209 634 aa13.89□□□□□ -0.19
APPL2-216ENST00000553109 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
APPL2-216ENST00000553109 POLA2Q14181 598 aa13.81□□□□□ -0.2
APPL2-216ENST00000553109 POTEHQ6S545 545 aa13.63□□□□□ -0.23
APPL2-216ENST00000553109 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
APPL2-216ENST00000553109 ATXN8OSP0DMR3 200 aa13.5□□□□□ -0.25
APPL2-216ENST00000553109 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
APPL2-216ENST00000553109 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
APPL2-216ENST00000553109 CHRDL2Q6WN34 429 aa13.33□□□□□ -0.28
APPL2-216ENST00000553109 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
APPL2-216ENST00000553109 CSRNP3Q8WYN3 585 aa13.24□□□□□ -0.29
APPL2-216ENST00000553109 REM2Q8IYK8 340 aaPredicted RBP13.22□□□□□ -0.29
APPL2-216ENST00000553109 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
APPL2-216ENST00000553109 FBLN2P98095 1184 aa13.19□□□□□ -0.3
APPL2-216ENST00000553109 PITPNM1O00562 1244 aa13.12□□□□□ -0.31
APPL2-216ENST00000553109 EHMT2Q96KQ7 1210 aa13.11□□□□□ -0.31
APPL2-216ENST00000553109 SPDYE2BA6NHP3 402 aa13.1□□□□□ -0.31
APPL2-216ENST00000553109 SPDYE6P0CI01 402 aa13.1□□□□□ -0.31
APPL2-216ENST00000553109 SPDYE2Q495Y8 402 aa13.1□□□□□ -0.31
APPL2-216ENST00000553109 PIP4P2Q8N4L2 257 aa13.05□□□□□ -0.32
APPL2-216ENST00000553109 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
APPL2-216ENST00000553109 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.33
APPL2-216ENST00000553109 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
APPL2-216ENST00000553109 CLEC11AQ9Y240 323 aa12.86□□□□□ -0.35
APPL2-216ENST00000553109 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
APPL2-216ENST00000553109 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
APPL2-216ENST00000553109 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
APPL2-216ENST00000553109 HAX1O00165 279 aa12.75□□□□□ -0.37
APPL2-216ENST00000553109 PRKAR2AP13861 404 aaKnown RBP12.75□□□□□ -0.37
APPL2-216ENST00000553109 EVX2Q03828 476 aa12.68□□□□□ -0.38
APPL2-216ENST00000553109 CHADLQ6NUI6 762 aa12.66□□□□□ -0.38
APPL2-216ENST00000553109 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
APPL2-216ENST00000553109 C19orf67A6NJJ6 358 aa12.55□□□□□ -0.4
APPL2-216ENST00000553109 SPDYE4A6NLX3 237 aa12.55□□□□□ -0.4
APPL2-216ENST00000553109 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
APPL2-216ENST00000553109 CREBZFQ9NS37 354 aa12.38□□□□□ -0.43
APPL2-216ENST00000553109 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
APPL2-216ENST00000553109 CD44P16070 742 aaKnown RBP12.36□□□□□ -0.43
APPL2-216ENST00000553109 GABBR2O75899 941 aa12.34□□□□□ -0.43
APPL2-216ENST00000553109 PROM2Q8N271 834 aa12.28□□□□□ -0.44
APPL2-216ENST00000553109 MNX1P50219 401 aaPredicted RBP12.19□□□□□ -0.46
APPL2-216ENST00000553109 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
APPL2-216ENST00000553109 ZNF579Q8NAF0 562 aaKnown RBP12.17□□□□□ -0.46
APPL2-216ENST00000553109 POTEIP0CG38 1075 aa12.14□□□□□ -0.47
APPL2-216ENST00000553109 NPM1P06748 294 aaKnown RBP eCLIP12.07□□□□□ -0.48
APPL2-216ENST00000553109 CLCN6P51797 869 aa12.06□□□□□ -0.48
APPL2-216ENST00000553109 PHF12Q96QT6 1004 aa12.06□□□□□ -0.48
APPL2-216ENST00000553109 GALR2O43603 387 aaPredicted RBP12.05□□□□□ -0.48
APPL2-216ENST00000553109 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
APPL2-216ENST00000553109 FKBP8Q14318 412 aa12□□□□□ -0.49
APPL2-216ENST00000553109 LHX8Q68G74 356 aa11.98□□□□□ -0.49
APPL2-216ENST00000553109 DCBLD2Q96PD2 775 aa11.98□□□□□ -0.49
APPL2-216ENST00000553109 TSPYL2Q9H2G4 693 aaPredicted RBP11.93□□□□□ -0.5
APPL2-216ENST00000553109 MIER1Q8N108 512 aa11.92□□□□□ -0.5
APPL2-216ENST00000553109 MS4A3Q96HJ5 214 aa11.9□□□□□ -0.5
APPL2-216ENST00000553109 CCDC61Q9Y6R9 512 aa11.88□□□□□ -0.51
APPL2-216ENST00000553109 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
APPL2-216ENST00000553109 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms