RNA–Protein interactions for RNA: ENST00000553042.1

CDK17-212, Transcript of cyclin dependent kinase 17, humanhuman

TSL 4

Gene CDK17, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-212ENST00000553042 AEBP2Q6ZN18 517 aaPredicted RBP29.13■■■□□ 2.25
CDK17-212ENST00000553042 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
CDK17-212ENST00000553042 PHF23Q9BUL5 403 aaPredicted RBP24.78■■□□□ 1.56
CDK17-212ENST00000553042 SENP3Q9H4L4 574 aaPredicted RBP24.76■■□□□ 1.55
CDK17-212ENST00000553042 FOXD1Q16676 465 aa23■■□□□ 1.27
CDK17-212ENST00000553042 PLPPR3Q6T4P5 718 aa22.79■■□□□ 1.24
CDK17-212ENST00000553042 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
CDK17-212ENST00000553042 ADRA2BP18089 450 aa21.89■■□□□ 1.09
CDK17-212ENST00000553042 PIAS4Q8N2W9 510 aaPredicted RBP21.62■■□□□ 1.05
CDK17-212ENST00000553042 MSH5O43196 834 aa21.32■■□□□ 1
CDK17-212ENST00000553042 PPP4R3CPQ6ZMV5 832 aa20.04■□□□□ 0.8
CDK17-212ENST00000553042 SCAF1Q9H7N4 1312 aaKnown RBP20.03■□□□□ 0.8
CDK17-212ENST00000553042 MAPK8IP2Q13387 824 aaPredicted RBP19.93■□□□□ 0.78
CDK17-212ENST00000553042 POTEDQ86YR6 584 aa19.85■□□□□ 0.77
CDK17-212ENST00000553042 DMRT2Q9Y5R5 561 aa19.73■□□□□ 0.75
CDK17-212ENST00000553042 CNKSR2Q8WXI2 1034 aa19.54■□□□□ 0.72
CDK17-212ENST00000553042 NCBP3Q53F19 620 aaKnown RBP19.43■□□□□ 0.7
CDK17-212ENST00000553042 KCNA4P22459 653 aa19.28■□□□□ 0.68
CDK17-212ENST00000553042 HOXD11P31277 338 aaPredicted RBP19.23■□□□□ 0.67
CDK17-212ENST00000553042 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
CDK17-212ENST00000553042 NPM3O75607 178 aaKnown RBP19.16■□□□□ 0.66
CDK17-212ENST00000553042 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
CDK17-212ENST00000553042 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
CDK17-212ENST00000553042 SLC4A1APQ9BWU0 796 aaKnown RBP18.3■□□□□ 0.52
CDK17-212ENST00000553042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.52
CDK17-212ENST00000553042 RNF39Q9H2S5 420 aa18.25■□□□□ 0.51
CDK17-212ENST00000553042 SLC4A2P04920 1241 aa18.16■□□□□ 0.5
CDK17-212ENST00000553042 C1QBPQ07021 282 aaKnown RBP18.02■□□□□ 0.48
CDK17-212ENST00000553042 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
CDK17-212ENST00000553042 CACNB1Q02641 598 aaPredicted RBP17.93■□□□□ 0.46
CDK17-212ENST00000553042 FOXD4L1Q9NU39 408 aa17.83■□□□□ 0.44
CDK17-212ENST00000553042 ZBTB22O15209 634 aa17.75■□□□□ 0.43
CDK17-212ENST00000553042 MYCNP04198 464 aaPredicted RBP17.71■□□□□ 0.43
CDK17-212ENST00000553042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
CDK17-212ENST00000553042 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
CDK17-212ENST00000553042 SAMD1Q6SPF0 538 aaPredicted RBP17.6■□□□□ 0.41
CDK17-212ENST00000553042 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
CDK17-212ENST00000553042 APLP2Q06481 763 aa17.54■□□□□ 0.4
CDK17-212ENST00000553042 CAPN15O75808 1086 aa17.47■□□□□ 0.39
CDK17-212ENST00000553042 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
CDK17-212ENST00000553042 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
CDK17-212ENST00000553042 ZNF219Q9P2Y4 722 aaPredicted RBP17.34■□□□□ 0.37
CDK17-212ENST00000553042 TRHP20396 242 aaPredicted RBP17.33■□□□□ 0.36
CDK17-212ENST00000553042 DSG3P32926 999 aa17.28■□□□□ 0.36
CDK17-212ENST00000553042 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
CDK17-212ENST00000553042 ATXN8OSP0DMR3 200 aa17.24■□□□□ 0.35
CDK17-212ENST00000553042 ABCB7O75027 752 aa17.11■□□□□ 0.33
CDK17-212ENST00000553042 POLA2Q14181 598 aa17■□□□□ 0.31
CDK17-212ENST00000553042 ZBTB12Q9Y330 459 aaPredicted RBP16.72■□□□□ 0.27
CDK17-212ENST00000553042 FBLN2P98095 1184 aa16.53■□□□□ 0.24
CDK17-212ENST00000553042 MKRN4PQ13434 485 aaPredicted RBP16.49■□□□□ 0.23
CDK17-212ENST00000553042 RBM42Q9BTD8 480 aaKnown RBP16.47■□□□□ 0.23
CDK17-212ENST00000553042 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
CDK17-212ENST00000553042 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
CDK17-212ENST00000553042 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
CDK17-212ENST00000553042 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
CDK17-212ENST00000553042 AKT1S1Q96B36 256 aa16.21■□□□□ 0.19
CDK17-212ENST00000553042 ZNF692Q9BU19 519 aaPredicted RBP16.13■□□□□ 0.17
CDK17-212ENST00000553042 SSUH2Q9Y2M2 353 aa16.11■□□□□ 0.17
CDK17-212ENST00000553042 REM2Q8IYK8 340 aaPredicted RBP16.05■□□□□ 0.16
CDK17-212ENST00000553042 SPDYE4A6NLX3 237 aa15.98■□□□□ 0.15
CDK17-212ENST00000553042 PABPN1Q86U42 306 aaKnown RBP eCLIP15.91■□□□□ 0.14
CDK17-212ENST00000553042 CHRDL2Q6WN34 429 aa15.87■□□□□ 0.13
CDK17-212ENST00000553042 PITPNM1O00562 1244 aa15.86■□□□□ 0.13
CDK17-212ENST00000553042 SPDYE1Q8NFV5 336 aaPredicted RBP15.82■□□□□ 0.12
CDK17-212ENST00000553042 FKBP8Q14318 412 aa15.76■□□□□ 0.11
CDK17-212ENST00000553042 CLEC11AQ9Y240 323 aa15.74■□□□□ 0.11
CDK17-212ENST00000553042 PROM2Q8N271 834 aa15.73■□□□□ 0.11
CDK17-212ENST00000553042 POTEHQ6S545 545 aa15.67■□□□□ 0.1
CDK17-212ENST00000553042 FXR2P51116 673 aaKnown RBP eCLIP15.64■□□□□ 0.09
CDK17-212ENST00000553042 PIP4P2Q8N4L2 257 aa15.61■□□□□ 0.09
CDK17-212ENST00000553042 STAG3Q9UJ98 1225 aa15.61■□□□□ 0.09
CDK17-212ENST00000553042 PRR29P0C7W0 189 aa15.58■□□□□ 0.08
CDK17-212ENST00000553042 PRKAR2AP13861 404 aaKnown RBP15.46■□□□□ 0.07
CDK17-212ENST00000553042 CHADLQ6NUI6 762 aa15.39■□□□□ 0.05
CDK17-212ENST00000553042 CREBZFQ9NS37 354 aa15.34■□□□□ 0.05
CDK17-212ENST00000553042 FBXO3Q9UK99 471 aa15.28■□□□□ 0.04
CDK17-212ENST00000553042 FARP1Q9Y4F1 1045 aaPredicted RBP15.24■□□□□ 0.03
CDK17-212ENST00000553042 HAX1O00165 279 aa15.17■□□□□ 0.02
CDK17-212ENST00000553042 MIER1Q8N108 512 aa15.17■□□□□ 0.02
CDK17-212ENST00000553042 MNX1P50219 401 aaPredicted RBP15.16■□□□□ 0.02
CDK17-212ENST00000553042 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
CDK17-212ENST00000553042 PLCD3Q8N3E9 789 aa15.12■□□□□ 0.01
CDK17-212ENST00000553042 C19orf67A6NJJ6 358 aa15.1■□□□□ 0.01
CDK17-212ENST00000553042 VASPP50552 380 aaPredicted RBP15.07■□□□□ 0
CDK17-212ENST00000553042 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
CDK17-212ENST00000553042 EVX2Q03828 476 aa15.04■□□□□ -0
CDK17-212ENST00000553042 CD44P16070 742 aaKnown RBP15□□□□□ -0.01
CDK17-212ENST00000553042 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
CDK17-212ENST00000553042 SP7Q8TDD2 431 aaPredicted RBP14.96□□□□□ -0.01
CDK17-212ENST00000553042 PAK3O75914 559 aaPredicted RBP14.87□□□□□ -0.03
CDK17-212ENST00000553042 ZRANB1Q9UGI0 708 aa14.87□□□□□ -0.03
CDK17-212ENST00000553042 IFNLR1Q8IU57 520 aaPredicted RBP14.86□□□□□ -0.03
CDK17-212ENST00000553042 NUBP1P53384 320 aa14.84□□□□□ -0.03
CDK17-212ENST00000553042 KLHL34Q8N239 644 aa14.84□□□□□ -0.03
CDK17-212ENST00000553042 RASEFQ8IZ41 740 aa14.83□□□□□ -0.04
CDK17-212ENST00000553042 ZNF579Q8NAF0 562 aaKnown RBP14.81□□□□□ -0.04
CDK17-212ENST00000553042 TSPYL2Q9H2G4 693 aaPredicted RBP14.8□□□□□ -0.04
CDK17-212ENST00000553042 CCDC61Q9Y6R9 512 aa14.74□□□□□ -0.05
CDK17-212ENST00000553042 GABBR2O75899 941 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms