RNA–Protein interactions for RNA: ENST00000552913.5

CNTN1-211, Transcript of contactin 1, humanhuman

TSL 4

Gene CNTN1, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-211ENST00000552913 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
CNTN1-211ENST00000552913 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
CNTN1-211ENST00000552913 SENP3Q9H4L4 574 aaPredicted RBP19.35■□□□□ 0.69
CNTN1-211ENST00000552913 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
CNTN1-211ENST00000552913 FOXD1Q16676 465 aa17.98■□□□□ 0.47
CNTN1-211ENST00000552913 POTEDQ86YR6 584 aa17.33■□□□□ 0.36
CNTN1-211ENST00000552913 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
CNTN1-211ENST00000552913 MSH5O43196 834 aa16.88■□□□□ 0.29
CNTN1-211ENST00000552913 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
CNTN1-211ENST00000552913 ADRA2BP18089 450 aa16.8■□□□□ 0.28
CNTN1-211ENST00000552913 PPP6R1Q9UPN7 881 aa16.8■□□□□ 0.28
CNTN1-211ENST00000552913 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
CNTN1-211ENST00000552913 MAPK8IP2Q13387 824 aaPredicted RBP15.41■□□□□ 0.06
CNTN1-211ENST00000552913 DMRT2Q9Y5R5 561 aa15.31■□□□□ 0.04
CNTN1-211ENST00000552913 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
CNTN1-211ENST00000552913 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
CNTN1-211ENST00000552913 DCAF8L1A6NGE4 600 aa14.82□□□□□ -0.04
CNTN1-211ENST00000552913 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
CNTN1-211ENST00000552913 CACNB1Q02641 598 aaPredicted RBP14.67□□□□□ -0.06
CNTN1-211ENST00000552913 RNF216Q9NWF9 866 aaPredicted RBP14.67□□□□□ -0.06
CNTN1-211ENST00000552913 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
CNTN1-211ENST00000552913 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
CNTN1-211ENST00000552913 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
CNTN1-211ENST00000552913 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
CNTN1-211ENST00000552913 C1QBPQ07021 282 aaKnown RBP14.18□□□□□ -0.14
CNTN1-211ENST00000552913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.16□□□□□ -0.14
CNTN1-211ENST00000552913 KCNA4P22459 653 aa14.06□□□□□ -0.16
CNTN1-211ENST00000552913 U3KPZ7 1027 aaPredicted RBP13.77□□□□□ -0.21
CNTN1-211ENST00000552913 CAPN15O75808 1086 aa13.64□□□□□ -0.23
CNTN1-211ENST00000552913 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
CNTN1-211ENST00000552913 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
CNTN1-211ENST00000552913 APLP2Q06481 763 aa13.52□□□□□ -0.25
CNTN1-211ENST00000552913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
CNTN1-211ENST00000552913 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
CNTN1-211ENST00000552913 DSG3P32926 999 aa13.45□□□□□ -0.26
CNTN1-211ENST00000552913 POTEHQ6S545 545 aa13.44□□□□□ -0.26
CNTN1-211ENST00000552913 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
CNTN1-211ENST00000552913 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
CNTN1-211ENST00000552913 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
CNTN1-211ENST00000552913 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
CNTN1-211ENST00000552913 ABCB7O75027 752 aa13.3□□□□□ -0.28
CNTN1-211ENST00000552913 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
CNTN1-211ENST00000552913 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
CNTN1-211ENST00000552913 POLA2Q14181 598 aa13.04□□□□□ -0.32
CNTN1-211ENST00000552913 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
CNTN1-211ENST00000552913 ATF5Q9Y2D1 282 aaPredicted RBP12.9□□□□□ -0.34
CNTN1-211ENST00000552913 ZBTB22O15209 634 aa12.87□□□□□ -0.35
CNTN1-211ENST00000552913 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
CNTN1-211ENST00000552913 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
CNTN1-211ENST00000552913 OSCARQ8IYS5 282 aa12.6□□□□□ -0.39
CNTN1-211ENST00000552913 AKT1S1Q96B36 256 aa12.59□□□□□ -0.39
CNTN1-211ENST00000552913 CHRDL2Q6WN34 429 aa12.58□□□□□ -0.4
CNTN1-211ENST00000552913 FBLN2P98095 1184 aa12.53□□□□□ -0.4
CNTN1-211ENST00000552913 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
CNTN1-211ENST00000552913 SPDYE2BA6NHP3 402 aa12.37□□□□□ -0.43
CNTN1-211ENST00000552913 SPDYE6P0CI01 402 aa12.37□□□□□ -0.43
CNTN1-211ENST00000552913 SPDYE2Q495Y8 402 aa12.37□□□□□ -0.43
CNTN1-211ENST00000552913 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
CNTN1-211ENST00000552913 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
CNTN1-211ENST00000552913 MKRN4PQ13434 485 aaPredicted RBP12.29□□□□□ -0.44
CNTN1-211ENST00000552913 EHMT2Q96KQ7 1210 aa12.29□□□□□ -0.44
CNTN1-211ENST00000552913 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
CNTN1-211ENST00000552913 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.45
CNTN1-211ENST00000552913 PIP4P2Q8N4L2 257 aa12.26□□□□□ -0.45
CNTN1-211ENST00000552913 CLEC11AQ9Y240 323 aa12.2□□□□□ -0.46
CNTN1-211ENST00000552913 FXR2P51116 673 aaKnown RBP eCLIP12.18□□□□□ -0.46
CNTN1-211ENST00000552913 SPDYE1Q8NFV5 336 aaPredicted RBP12.18□□□□□ -0.46
CNTN1-211ENST00000552913 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
CNTN1-211ENST00000552913 HAX1O00165 279 aa12.12□□□□□ -0.47
CNTN1-211ENST00000552913 PABPN1Q86U42 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
CNTN1-211ENST00000552913 PRKAR2AP13861 404 aaKnown RBP12.04□□□□□ -0.48
CNTN1-211ENST00000552913 PRR29P0C7W0 189 aa11.98□□□□□ -0.49
CNTN1-211ENST00000552913 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
CNTN1-211ENST00000552913 EVX2Q03828 476 aa11.85□□□□□ -0.51
CNTN1-211ENST00000552913 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
CNTN1-211ENST00000552913 C19orf67A6NJJ6 358 aa11.79□□□□□ -0.52
CNTN1-211ENST00000552913 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
CNTN1-211ENST00000552913 FARP1Q9Y4F1 1045 aaPredicted RBP11.72□□□□□ -0.53
CNTN1-211ENST00000552913 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
CNTN1-211ENST00000552913 GABBR2O75899 941 aa11.63□□□□□ -0.55
CNTN1-211ENST00000552913 CREBZFQ9NS37 354 aa11.6□□□□□ -0.55
CNTN1-211ENST00000552913 LHX8Q68G74 356 aa11.53□□□□□ -0.56
CNTN1-211ENST00000552913 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.57
CNTN1-211ENST00000552913 PAK3O75914 559 aaPredicted RBP11.5□□□□□ -0.57
CNTN1-211ENST00000552913 CLCN6P51797 869 aa11.5□□□□□ -0.57
CNTN1-211ENST00000552913 NPM1P06748 294 aaKnown RBP eCLIP11.49□□□□□ -0.57
CNTN1-211ENST00000552913 ZNF579Q8NAF0 562 aaKnown RBP11.44□□□□□ -0.58
CNTN1-211ENST00000552913 PLSCR2Q9NRY7 297 aa11.43□□□□□ -0.58
CNTN1-211ENST00000552913 PROM2Q8N271 834 aa11.42□□□□□ -0.58
CNTN1-211ENST00000552913 DCBLD2Q96PD2 775 aa11.42□□□□□ -0.58
CNTN1-211ENST00000552913 PLEKHG5O94827 1062 aa11.38□□□□□ -0.59
CNTN1-211ENST00000552913 MNX1P50219 401 aaPredicted RBP11.36□□□□□ -0.59
CNTN1-211ENST00000552913 POTEIP0CG38 1075 aa11.33□□□□□ -0.6
CNTN1-211ENST00000552913 MIER1Q8N108 512 aa11.33□□□□□ -0.6
CNTN1-211ENST00000552913 PHF12Q96QT6 1004 aa11.32□□□□□ -0.6
CNTN1-211ENST00000552913 GALR2O43603 387 aaPredicted RBP11.3□□□□□ -0.6
CNTN1-211ENST00000552913 FKBP8Q14318 412 aa11.28□□□□□ -0.6
CNTN1-211ENST00000552913 TSPYL2Q9H2G4 693 aaPredicted RBP11.27□□□□□ -0.61
CNTN1-211ENST00000552913 PLCD3Q8N3E9 789 aa11.26□□□□□ -0.61
CNTN1-211ENST00000552913 MS4A3Q96HJ5 214 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms