RNA–Protein interactions for RNA: ENST00000552612.5

PKP2-207, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-207ENST00000552612 AEBP2Q6ZN18 517 aaPredicted RBP18.69■□□□□ 0.58
PKP2-207ENST00000552612 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
PKP2-207ENST00000552612 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
PKP2-207ENST00000552612 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.11
PKP2-207ENST00000552612 PLPPR3Q6T4P5 718 aa14.96□□□□□ -0.01
PKP2-207ENST00000552612 FOXD1Q16676 465 aa14.62□□□□□ -0.07
PKP2-207ENST00000552612 PPP6R1Q9UPN7 881 aa14.26□□□□□ -0.13
PKP2-207ENST00000552612 ADRA2BP18089 450 aa14.21□□□□□ -0.13
PKP2-207ENST00000552612 PIAS4Q8N2W9 510 aaPredicted RBP13.75□□□□□ -0.21
PKP2-207ENST00000552612 MSH5O43196 834 aa13.32□□□□□ -0.28
PKP2-207ENST00000552612 PPP4R3CPQ6ZMV5 832 aa13.22□□□□□ -0.29
PKP2-207ENST00000552612 KCNA4P22459 653 aa13.19□□□□□ -0.3
PKP2-207ENST00000552612 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
PKP2-207ENST00000552612 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
PKP2-207ENST00000552612 MAPK8IP2Q13387 824 aaPredicted RBP12.84□□□□□ -0.35
PKP2-207ENST00000552612 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
PKP2-207ENST00000552612 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
PKP2-207ENST00000552612 DMRT2Q9Y5R5 561 aa12.62□□□□□ -0.39
PKP2-207ENST00000552612 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
PKP2-207ENST00000552612 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.41
PKP2-207ENST00000552612 DNAJC5BQ9UF47 199 aa12.48□□□□□ -0.41
PKP2-207ENST00000552612 HOXD11P31277 338 aaPredicted RBP12.45□□□□□ -0.42
PKP2-207ENST00000552612 EHMT2Q96KQ7 1210 aa12.38□□□□□ -0.43
PKP2-207ENST00000552612 CSRNP3Q8WYN3 585 aa12.25□□□□□ -0.45
PKP2-207ENST00000552612 ZBTB22O15209 634 aa12.21□□□□□ -0.45
PKP2-207ENST00000552612 SLC4A2P04920 1241 aa12.07□□□□□ -0.48
PKP2-207ENST00000552612 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
PKP2-207ENST00000552612 DCAF8L1A6NGE4 600 aa11.9□□□□□ -0.5
PKP2-207ENST00000552612 POTEDQ86YR6 584 aa11.83□□□□□ -0.52
PKP2-207ENST00000552612 MYCNP04198 464 aaPredicted RBP11.76□□□□□ -0.53
PKP2-207ENST00000552612 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.53
PKP2-207ENST00000552612 U3KPZ7 1027 aaPredicted RBP11.69□□□□□ -0.54
PKP2-207ENST00000552612 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
PKP2-207ENST00000552612 ATF5Q9Y2D1 282 aaPredicted RBP11.52□□□□□ -0.57
PKP2-207ENST00000552612 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
PKP2-207ENST00000552612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.49□□□□□ -0.57
PKP2-207ENST00000552612 HNRNPUL2Q1KMD3 747 aaKnown RBP11.49□□□□□ -0.57
PKP2-207ENST00000552612 SAMD1Q6SPF0 538 aaPredicted RBP11.49□□□□□ -0.57
PKP2-207ENST00000552612 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
PKP2-207ENST00000552612 SPINK5Q9NQ38 1064 aaPredicted RBP11.29□□□□□ -0.6
PKP2-207ENST00000552612 APLP2Q06481 763 aa11.28□□□□□ -0.6
PKP2-207ENST00000552612 ZNF219Q9P2Y4 722 aaPredicted RBP11.24□□□□□ -0.61
PKP2-207ENST00000552612 CAPN15O75808 1086 aa11.13□□□□□ -0.63
PKP2-207ENST00000552612 TRHP20396 242 aaPredicted RBP11.13□□□□□ -0.63
PKP2-207ENST00000552612 MKRN4PQ13434 485 aaPredicted RBP11.04□□□□□ -0.64
PKP2-207ENST00000552612 POLA2Q14181 598 aa11.04□□□□□ -0.64
PKP2-207ENST00000552612 DSG3P32926 999 aa11□□□□□ -0.65
PKP2-207ENST00000552612 ABCB7O75027 752 aa10.98□□□□□ -0.65
PKP2-207ENST00000552612 FKBP8Q14318 412 aa10.97□□□□□ -0.65
PKP2-207ENST00000552612 CACNB1Q02641 598 aaPredicted RBP10.95□□□□□ -0.66
PKP2-207ENST00000552612 FBLN2P98095 1184 aa10.86□□□□□ -0.67
PKP2-207ENST00000552612 ZBTB12Q9Y330 459 aaPredicted RBP10.84□□□□□ -0.67
PKP2-207ENST00000552612 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
PKP2-207ENST00000552612 PROM2Q8N271 834 aa10.77□□□□□ -0.69
PKP2-207ENST00000552612 OSCARQ8IYS5 282 aa10.69□□□□□ -0.7
PKP2-207ENST00000552612 SSUH2Q9Y2M2 353 aa10.62□□□□□ -0.71
PKP2-207ENST00000552612 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
PKP2-207ENST00000552612 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
PKP2-207ENST00000552612 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
PKP2-207ENST00000552612 ZNF692Q9BU19 519 aaPredicted RBP10.56□□□□□ -0.72
PKP2-207ENST00000552612 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
PKP2-207ENST00000552612 PABPN1Q86U42 306 aaKnown RBP eCLIP10.45□□□□□ -0.74
PKP2-207ENST00000552612 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
PKP2-207ENST00000552612 RTN4Q9NQC3 1192 aaKnown RBP10.39□□□□□ -0.75
PKP2-207ENST00000552612 RBM42Q9BTD8 480 aaKnown RBP10.38□□□□□ -0.75
PKP2-207ENST00000552612 AKT1S1Q96B36 256 aa10.35□□□□□ -0.75
PKP2-207ENST00000552612 AMER1Q5JTC6 1135 aaPredicted RBP10.34□□□□□ -0.75
PKP2-207ENST00000552612 IFNLR1Q8IU57 520 aaPredicted RBP10.32□□□□□ -0.76
PKP2-207ENST00000552612 STAG3Q9UJ98 1225 aa10.3□□□□□ -0.76
PKP2-207ENST00000552612 REM2Q8IYK8 340 aaPredicted RBP10.27□□□□□ -0.77
PKP2-207ENST00000552612 SPDYE1Q8NFV5 336 aaPredicted RBP10.21□□□□□ -0.77
PKP2-207ENST00000552612 PITPNM1O00562 1244 aa10.16□□□□□ -0.78
PKP2-207ENST00000552612 PLCD3Q8N3E9 789 aa10.14□□□□□ -0.79
PKP2-207ENST00000552612 MIER1Q8N108 512 aa10.13□□□□□ -0.79
PKP2-207ENST00000552612 CLEC11AQ9Y240 323 aa10.11□□□□□ -0.79
PKP2-207ENST00000552612 CREBZFQ9NS37 354 aa10.1□□□□□ -0.79
PKP2-207ENST00000552612 SPOCK2Q92563 424 aa10.09□□□□□ -0.79
PKP2-207ENST00000552612 MNX1P50219 401 aaPredicted RBP10.08□□□□□ -0.8
PKP2-207ENST00000552612 PKD2Q13563 968 aa10.07□□□□□ -0.8
PKP2-207ENST00000552612 KLHL34Q8N239 644 aa10.07□□□□□ -0.8
PKP2-207ENST00000552612 PRR29P0C7W0 189 aa10.06□□□□□ -0.8
PKP2-207ENST00000552612 ZBTB47Q9UFB7 747 aaPredicted RBP10.01□□□□□ -0.81
PKP2-207ENST00000552612 PLEKHG5O94827 1062 aa9.99□□□□□ -0.81
PKP2-207ENST00000552612 NUBP1P53384 320 aa9.99□□□□□ -0.81
PKP2-207ENST00000552612 FXR2P51116 673 aaKnown RBP eCLIP9.95□□□□□ -0.82
PKP2-207ENST00000552612 CHADLQ6NUI6 762 aa9.92□□□□□ -0.82
PKP2-207ENST00000552612 CHRDL2Q6WN34 429 aa9.92□□□□□ -0.82
PKP2-207ENST00000552612 RASEFQ8IZ41 740 aa9.88□□□□□ -0.83
PKP2-207ENST00000552612 PIP4P2Q8N4L2 257 aa9.87□□□□□ -0.83
PKP2-207ENST00000552612 ECM2O94769 699 aaPredicted RBP9.86□□□□□ -0.83
PKP2-207ENST00000552612 PRKAR2AP13861 404 aaKnown RBP9.86□□□□□ -0.83
PKP2-207ENST00000552612 FARP1Q9Y4F1 1045 aaPredicted RBP9.85□□□□□ -0.83
PKP2-207ENST00000552612 RGL2O15211 777 aa9.84□□□□□ -0.83
PKP2-207ENST00000552612 CIZ1Q9ULV3 898 aaPredicted RBP9.84□□□□□ -0.83
PKP2-207ENST00000552612 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
PKP2-207ENST00000552612 GSE1Q14687 1217 aa9.82□□□□□ -0.84
PKP2-207ENST00000552612 TRIM41Q8WV44 630 aa9.8□□□□□ -0.84
PKP2-207ENST00000552612 RNF25Q96BH1 459 aaPredicted RBP9.79□□□□□ -0.84
PKP2-207ENST00000552612 FAM212AQ96EL1 285 aa9.79□□□□□ -0.84
PKP2-207ENST00000552612 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms