RNA–Protein interactions for RNA: ENST00000552323.1

ATXN2-225, Transcript of ataxin 2, humanhuman

TSL 3

Gene ATXN2, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-225ENST00000552323 AEBP2Q6ZN18 517 aaPredicted RBP26.62■■□□□ 1.85
ATXN2-225ENST00000552323 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
ATXN2-225ENST00000552323 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
ATXN2-225ENST00000552323 PHF23Q9BUL5 403 aaPredicted RBP22.41■■□□□ 1.18
ATXN2-225ENST00000552323 FOXD1Q16676 465 aa21.11■□□□□ 0.97
ATXN2-225ENST00000552323 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
ATXN2-225ENST00000552323 PPP6R1Q9UPN7 881 aa19.88■□□□□ 0.77
ATXN2-225ENST00000552323 ADRA2BP18089 450 aa19.81■□□□□ 0.76
ATXN2-225ENST00000552323 PIAS4Q8N2W9 510 aaPredicted RBP19.75■□□□□ 0.75
ATXN2-225ENST00000552323 MSH5O43196 834 aa19.7■□□□□ 0.74
ATXN2-225ENST00000552323 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
ATXN2-225ENST00000552323 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
ATXN2-225ENST00000552323 MAPK8IP2Q13387 824 aaPredicted RBP18.13■□□□□ 0.49
ATXN2-225ENST00000552323 DMRT2Q9Y5R5 561 aa18.04■□□□□ 0.48
ATXN2-225ENST00000552323 PPP4R3CPQ6ZMV5 832 aa17.96■□□□□ 0.47
ATXN2-225ENST00000552323 CNKSR2Q8WXI2 1034 aa17.59■□□□□ 0.41
ATXN2-225ENST00000552323 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
ATXN2-225ENST00000552323 RNF216Q9NWF9 866 aaPredicted RBP17.39■□□□□ 0.37
ATXN2-225ENST00000552323 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
ATXN2-225ENST00000552323 DCAF8L1A6NGE4 600 aa17.19■□□□□ 0.34
ATXN2-225ENST00000552323 NPM3O75607 178 aaKnown RBP17.07■□□□□ 0.32
ATXN2-225ENST00000552323 KCNA4P22459 653 aa16.92■□□□□ 0.3
ATXN2-225ENST00000552323 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
ATXN2-225ENST00000552323 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
ATXN2-225ENST00000552323 CACNB1Q02641 598 aaPredicted RBP16.73■□□□□ 0.27
ATXN2-225ENST00000552323 C1QBPQ07021 282 aaKnown RBP16.6■□□□□ 0.25
ATXN2-225ENST00000552323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.59■□□□□ 0.25
ATXN2-225ENST00000552323 U3KPZ7 1027 aaPredicted RBP16.3■□□□□ 0.2
ATXN2-225ENST00000552323 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
ATXN2-225ENST00000552323 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
ATXN2-225ENST00000552323 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
ATXN2-225ENST00000552323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
ATXN2-225ENST00000552323 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
ATXN2-225ENST00000552323 CAPN15O75808 1086 aa15.92■□□□□ 0.14
ATXN2-225ENST00000552323 APLP2Q06481 763 aa15.89■□□□□ 0.13
ATXN2-225ENST00000552323 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
ATXN2-225ENST00000552323 DSG3P32926 999 aa15.82■□□□□ 0.12
ATXN2-225ENST00000552323 MYCNP04198 464 aaPredicted RBP15.81■□□□□ 0.12
ATXN2-225ENST00000552323 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
ATXN2-225ENST00000552323 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
ATXN2-225ENST00000552323 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
ATXN2-225ENST00000552323 ZBTB22O15209 634 aa15.55■□□□□ 0.08
ATXN2-225ENST00000552323 ABCB7O75027 752 aa15.55■□□□□ 0.08
ATXN2-225ENST00000552323 ATF5Q9Y2D1 282 aaPredicted RBP15.38■□□□□ 0.05
ATXN2-225ENST00000552323 POLA2Q14181 598 aa15.35■□□□□ 0.05
ATXN2-225ENST00000552323 ATXN8OSP0DMR3 200 aa15.28■□□□□ 0.04
ATXN2-225ENST00000552323 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
ATXN2-225ENST00000552323 ZBTB12Q9Y330 459 aaPredicted RBP15.1■□□□□ 0.01
ATXN2-225ENST00000552323 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
ATXN2-225ENST00000552323 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
ATXN2-225ENST00000552323 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
ATXN2-225ENST00000552323 POTEHQ6S545 545 aa14.81□□□□□ -0.04
ATXN2-225ENST00000552323 AKT1S1Q96B36 256 aa14.8□□□□□ -0.04
ATXN2-225ENST00000552323 FBLN2P98095 1184 aa14.79□□□□□ -0.04
ATXN2-225ENST00000552323 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
ATXN2-225ENST00000552323 CHRDL2Q6WN34 429 aa14.66□□□□□ -0.06
ATXN2-225ENST00000552323 SPDYE2BA6NHP3 402 aa14.65□□□□□ -0.06
ATXN2-225ENST00000552323 SPDYE6P0CI01 402 aa14.65□□□□□ -0.06
ATXN2-225ENST00000552323 SPDYE2Q495Y8 402 aa14.65□□□□□ -0.06
ATXN2-225ENST00000552323 REM2Q8IYK8 340 aaPredicted RBP14.63□□□□□ -0.07
ATXN2-225ENST00000552323 SSUH2Q9Y2M2 353 aa14.48□□□□□ -0.09
ATXN2-225ENST00000552323 PITPNM1O00562 1244 aa14.47□□□□□ -0.09
ATXN2-225ENST00000552323 ZNF692Q9BU19 519 aaPredicted RBP14.47□□□□□ -0.09
ATXN2-225ENST00000552323 PIP4P2Q8N4L2 257 aa14.36□□□□□ -0.11
ATXN2-225ENST00000552323 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
ATXN2-225ENST00000552323 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
ATXN2-225ENST00000552323 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
ATXN2-225ENST00000552323 CLEC11AQ9Y240 323 aa14.25□□□□□ -0.13
ATXN2-225ENST00000552323 SPDYE4A6NLX3 237 aa14.12□□□□□ -0.15
ATXN2-225ENST00000552323 PRKAR2AP13861 404 aaKnown RBP14.1□□□□□ -0.15
ATXN2-225ENST00000552323 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
ATXN2-225ENST00000552323 HAX1O00165 279 aa14.01□□□□□ -0.17
ATXN2-225ENST00000552323 SP7Q8TDD2 431 aaPredicted RBP13.99□□□□□ -0.17
ATXN2-225ENST00000552323 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.17
ATXN2-225ENST00000552323 CHADLQ6NUI6 762 aa13.95□□□□□ -0.18
ATXN2-225ENST00000552323 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
ATXN2-225ENST00000552323 EVX2Q03828 476 aa13.86□□□□□ -0.19
ATXN2-225ENST00000552323 PROM2Q8N271 834 aa13.86□□□□□ -0.19
ATXN2-225ENST00000552323 FARP1Q9Y4F1 1045 aaPredicted RBP13.81□□□□□ -0.2
ATXN2-225ENST00000552323 CREBZFQ9NS37 354 aa13.78□□□□□ -0.2
ATXN2-225ENST00000552323 CD44P16070 742 aaKnown RBP13.66□□□□□ -0.22
ATXN2-225ENST00000552323 FKBP8Q14318 412 aa13.6□□□□□ -0.23
ATXN2-225ENST00000552323 GABBR2O75899 941 aa13.59□□□□□ -0.23
ATXN2-225ENST00000552323 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
ATXN2-225ENST00000552323 NPM1P06748 294 aaKnown RBP eCLIP13.54□□□□□ -0.24
ATXN2-225ENST00000552323 CLCN6P51797 869 aa13.52□□□□□ -0.25
ATXN2-225ENST00000552323 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
ATXN2-225ENST00000552323 ZNF579Q8NAF0 562 aaKnown RBP13.49□□□□□ -0.25
ATXN2-225ENST00000552323 PAK3O75914 559 aaPredicted RBP13.44□□□□□ -0.26
ATXN2-225ENST00000552323 PLEKHG5O94827 1062 aa13.42□□□□□ -0.26
ATXN2-225ENST00000552323 MIER1Q8N108 512 aa13.42□□□□□ -0.26
ATXN2-225ENST00000552323 PLCD3Q8N3E9 789 aa13.34□□□□□ -0.27
ATXN2-225ENST00000552323 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
ATXN2-225ENST00000552323 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
ATXN2-225ENST00000552323 POTEIP0CG38 1075 aa13.3□□□□□ -0.28
ATXN2-225ENST00000552323 GALR2O43603 387 aaPredicted RBP13.28□□□□□ -0.28
ATXN2-225ENST00000552323 ZBTB47Q9UFB7 747 aaPredicted RBP13.28□□□□□ -0.28
ATXN2-225ENST00000552323 TSPYL2Q9H2G4 693 aaPredicted RBP13.26□□□□□ -0.29
ATXN2-225ENST00000552323 DCBLD2Q96PD2 775 aa13.25□□□□□ -0.29
ATXN2-225ENST00000552323 CCDC61Q9Y6R9 512 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms