RNA–Protein interactions for RNA: ENST00000552275.1

ATP2B1-210, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-210ENST00000552275 AEBP2Q6ZN18 517 aaPredicted RBP26.34■■□□□ 1.81
ATP2B1-210ENST00000552275 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
ATP2B1-210ENST00000552275 SENP3Q9H4L4 574 aaPredicted RBP22.45■■□□□ 1.18
ATP2B1-210ENST00000552275 PHF23Q9BUL5 403 aaPredicted RBP22.22■■□□□ 1.15
ATP2B1-210ENST00000552275 FOXD1Q16676 465 aa20.94■□□□□ 0.94
ATP2B1-210ENST00000552275 PLPPR3Q6T4P5 718 aa20.37■□□□□ 0.85
ATP2B1-210ENST00000552275 PPP6R1Q9UPN7 881 aa19.65■□□□□ 0.74
ATP2B1-210ENST00000552275 ADRA2BP18089 450 aa19.62■□□□□ 0.73
ATP2B1-210ENST00000552275 PIAS4Q8N2W9 510 aaPredicted RBP19.59■□□□□ 0.73
ATP2B1-210ENST00000552275 MSH5O43196 834 aa19.54■□□□□ 0.72
ATP2B1-210ENST00000552275 POTEDQ86YR6 584 aa18.97■□□□□ 0.63
ATP2B1-210ENST00000552275 KCNA4P22459 653 aa18.26■□□□□ 0.51
ATP2B1-210ENST00000552275 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
ATP2B1-210ENST00000552275 PPP4R3CPQ6ZMV5 832 aa18.01■□□□□ 0.47
ATP2B1-210ENST00000552275 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
ATP2B1-210ENST00000552275 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
ATP2B1-210ENST00000552275 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
ATP2B1-210ENST00000552275 EHMT2Q96KQ7 1210 aa17.67■□□□□ 0.42
ATP2B1-210ENST00000552275 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
ATP2B1-210ENST00000552275 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
ATP2B1-210ENST00000552275 CNKSR2Q8WXI2 1034 aa17.38■□□□□ 0.37
ATP2B1-210ENST00000552275 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
ATP2B1-210ENST00000552275 CSRNP3Q8WYN3 585 aa17.2■□□□□ 0.34
ATP2B1-210ENST00000552275 HOXD11P31277 338 aaPredicted RBP17.16■□□□□ 0.34
ATP2B1-210ENST00000552275 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
ATP2B1-210ENST00000552275 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
ATP2B1-210ENST00000552275 ZBTB22O15209 634 aa16.83■□□□□ 0.28
ATP2B1-210ENST00000552275 CACNB1Q02641 598 aaPredicted RBP16.79■□□□□ 0.28
ATP2B1-210ENST00000552275 RNF39Q9H2S5 420 aa16.67■□□□□ 0.26
ATP2B1-210ENST00000552275 FOXD4L1Q9NU39 408 aa16.66■□□□□ 0.26
ATP2B1-210ENST00000552275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.45■□□□□ 0.22
ATP2B1-210ENST00000552275 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
ATP2B1-210ENST00000552275 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
ATP2B1-210ENST00000552275 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
ATP2B1-210ENST00000552275 U3KPZ7 1027 aaPredicted RBP16.05■□□□□ 0.16
ATP2B1-210ENST00000552275 ATXN8OSP0DMR3 200 aa16.03■□□□□ 0.16
ATP2B1-210ENST00000552275 CAPN15O75808 1086 aa15.83■□□□□ 0.12
ATP2B1-210ENST00000552275 SPINK5Q9NQ38 1064 aaPredicted RBP15.83■□□□□ 0.12
ATP2B1-210ENST00000552275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
ATP2B1-210ENST00000552275 HNRNPUL2Q1KMD3 747 aaKnown RBP15.71■□□□□ 0.11
ATP2B1-210ENST00000552275 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
ATP2B1-210ENST00000552275 DSG3P32926 999 aa15.66■□□□□ 0.1
ATP2B1-210ENST00000552275 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
ATP2B1-210ENST00000552275 APLP2Q06481 763 aa15.62■□□□□ 0.09
ATP2B1-210ENST00000552275 TRHP20396 242 aaPredicted RBP15.61■□□□□ 0.09
ATP2B1-210ENST00000552275 FKBP8Q14318 412 aa15.51■□□□□ 0.07
ATP2B1-210ENST00000552275 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
ATP2B1-210ENST00000552275 ABCB7O75027 752 aa15.47■□□□□ 0.07
ATP2B1-210ENST00000552275 POLA2Q14181 598 aa15.19■□□□□ 0.02
ATP2B1-210ENST00000552275 AMER1Q5JTC6 1135 aaPredicted RBP15.18■□□□□ 0.02
ATP2B1-210ENST00000552275 RTN4Q9NQC3 1192 aaKnown RBP15.15■□□□□ 0.02
ATP2B1-210ENST00000552275 MKRN4PQ13434 485 aaPredicted RBP15.01□□□□□ -0.01
ATP2B1-210ENST00000552275 SPDYE4A6NLX3 237 aa14.94□□□□□ -0.02
ATP2B1-210ENST00000552275 FBLN2P98095 1184 aa14.94□□□□□ -0.02
ATP2B1-210ENST00000552275 RBM42Q9BTD8 480 aaKnown RBP14.93□□□□□ -0.02
ATP2B1-210ENST00000552275 POTEHQ6S545 545 aa14.89□□□□□ -0.03
ATP2B1-210ENST00000552275 PROM2Q8N271 834 aa14.82□□□□□ -0.04
ATP2B1-210ENST00000552275 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
ATP2B1-210ENST00000552275 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
ATP2B1-210ENST00000552275 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
ATP2B1-210ENST00000552275 SLC24A1O60721 1099 aa14.65□□□□□ -0.06
ATP2B1-210ENST00000552275 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
ATP2B1-210ENST00000552275 CHRDL2Q6WN34 429 aa14.59□□□□□ -0.07
ATP2B1-210ENST00000552275 VASPP50552 380 aaPredicted RBP14.58□□□□□ -0.08
ATP2B1-210ENST00000552275 REM2Q8IYK8 340 aaPredicted RBP14.5□□□□□ -0.09
ATP2B1-210ENST00000552275 IFNLR1Q8IU57 520 aaPredicted RBP14.44□□□□□ -0.1
ATP2B1-210ENST00000552275 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
ATP2B1-210ENST00000552275 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
ATP2B1-210ENST00000552275 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
ATP2B1-210ENST00000552275 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
ATP2B1-210ENST00000552275 SSUH2Q9Y2M2 353 aa14.39□□□□□ -0.11
ATP2B1-210ENST00000552275 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
ATP2B1-210ENST00000552275 STAG3Q9UJ98 1225 aa14.29□□□□□ -0.12
ATP2B1-210ENST00000552275 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
ATP2B1-210ENST00000552275 PIP4P2Q8N4L2 257 aa14.26□□□□□ -0.13
ATP2B1-210ENST00000552275 PKD2Q13563 968 aa14.19□□□□□ -0.14
ATP2B1-210ENST00000552275 FXR2P51116 673 aaKnown RBP eCLIP14.18□□□□□ -0.14
ATP2B1-210ENST00000552275 KLHL34Q8N239 644 aa14.17□□□□□ -0.14
ATP2B1-210ENST00000552275 CLEC11AQ9Y240 323 aa14.17□□□□□ -0.14
ATP2B1-210ENST00000552275 SPOCK2Q92563 424 aa14.16□□□□□ -0.14
ATP2B1-210ENST00000552275 PLCD3Q8N3E9 789 aa14.13□□□□□ -0.15
ATP2B1-210ENST00000552275 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
ATP2B1-210ENST00000552275 MIER1Q8N108 512 aa14.08□□□□□ -0.16
ATP2B1-210ENST00000552275 HAX1O00165 279 aa14.05□□□□□ -0.16
ATP2B1-210ENST00000552275 DCAF8L2P0C7V8 631 aa14.05□□□□□ -0.16
ATP2B1-210ENST00000552275 PLCB2Q00722 1185 aa14.01□□□□□ -0.17
ATP2B1-210ENST00000552275 PRKAR2AP13861 404 aaKnown RBP13.99□□□□□ -0.17
ATP2B1-210ENST00000552275 SP7Q8TDD2 431 aaPredicted RBP13.98□□□□□ -0.17
ATP2B1-210ENST00000552275 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.17
ATP2B1-210ENST00000552275 PLEKHG5O94827 1062 aa13.96□□□□□ -0.17
ATP2B1-210ENST00000552275 ZBTB47Q9UFB7 747 aaPredicted RBP13.96□□□□□ -0.17
ATP2B1-210ENST00000552275 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
ATP2B1-210ENST00000552275 CHADLQ6NUI6 762 aa13.87□□□□□ -0.19
ATP2B1-210ENST00000552275 EVX2Q03828 476 aa13.84□□□□□ -0.19
ATP2B1-210ENST00000552275 RGL2O15211 777 aa13.82□□□□□ -0.2
ATP2B1-210ENST00000552275 CIZ1Q9ULV3 898 aaPredicted RBP13.82□□□□□ -0.2
ATP2B1-210ENST00000552275 HAP1P54257 671 aaPredicted RBP13.78□□□□□ -0.2
ATP2B1-210ENST00000552275 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
ATP2B1-210ENST00000552275 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
ATP2B1-210ENST00000552275 TRIM41Q8WV44 630 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms