RNA–Protein interactions for RNA: ENST00000552248.5

CNTN1-210, Transcript of contactin 1, humanhuman

TSL 3

Gene CNTN1, Length 463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-210ENST00000552248 AEBP2Q6ZN18 517 aaPredicted RBP26.83■■□□□ 1.89
CNTN1-210ENST00000552248 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
CNTN1-210ENST00000552248 SENP3Q9H4L4 574 aaPredicted RBP22.92■■□□□ 1.26
CNTN1-210ENST00000552248 PHF23Q9BUL5 403 aaPredicted RBP22.72■■□□□ 1.23
CNTN1-210ENST00000552248 FOXD1Q16676 465 aa21.26■□□□□ 0.99
CNTN1-210ENST00000552248 PLPPR3Q6T4P5 718 aa20.94■□□□□ 0.94
CNTN1-210ENST00000552248 ADRA2BP18089 450 aa20.18■□□□□ 0.82
CNTN1-210ENST00000552248 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
CNTN1-210ENST00000552248 PIAS4Q8N2W9 510 aaPredicted RBP20.04■□□□□ 0.8
CNTN1-210ENST00000552248 MSH5O43196 834 aa19.8■□□□□ 0.76
CNTN1-210ENST00000552248 POTEDQ86YR6 584 aa18.58■□□□□ 0.56
CNTN1-210ENST00000552248 SCAF1Q9H7N4 1312 aaKnown RBP18.53■□□□□ 0.56
CNTN1-210ENST00000552248 PPP4R3CPQ6ZMV5 832 aa18.4■□□□□ 0.54
CNTN1-210ENST00000552248 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
CNTN1-210ENST00000552248 DMRT2Q9Y5R5 561 aa18.2■□□□□ 0.5
CNTN1-210ENST00000552248 CNKSR2Q8WXI2 1034 aa17.97■□□□□ 0.47
CNTN1-210ENST00000552248 NCBP3Q53F19 620 aaKnown RBP17.88■□□□□ 0.45
CNTN1-210ENST00000552248 RNF216Q9NWF9 866 aaPredicted RBP17.69■□□□□ 0.42
CNTN1-210ENST00000552248 HOXD11P31277 338 aaPredicted RBP17.67■□□□□ 0.42
CNTN1-210ENST00000552248 KCNA4P22459 653 aa17.57■□□□□ 0.4
CNTN1-210ENST00000552248 DCAF8L1A6NGE4 600 aa17.56■□□□□ 0.4
CNTN1-210ENST00000552248 NPM3O75607 178 aaKnown RBP17.54■□□□□ 0.4
CNTN1-210ENST00000552248 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
CNTN1-210ENST00000552248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.3
CNTN1-210ENST00000552248 RNF39Q9H2S5 420 aa16.88■□□□□ 0.29
CNTN1-210ENST00000552248 CACNB1Q02641 598 aaPredicted RBP16.77■□□□□ 0.28
CNTN1-210ENST00000552248 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
CNTN1-210ENST00000552248 C1QBPQ07021 282 aaKnown RBP16.7■□□□□ 0.26
CNTN1-210ENST00000552248 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
CNTN1-210ENST00000552248 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
CNTN1-210ENST00000552248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
CNTN1-210ENST00000552248 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
CNTN1-210ENST00000552248 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
CNTN1-210ENST00000552248 MYCNP04198 464 aaPredicted RBP16.25■□□□□ 0.19
CNTN1-210ENST00000552248 APLP2Q06481 763 aa16.24■□□□□ 0.19
CNTN1-210ENST00000552248 CAPN15O75808 1086 aa16.23■□□□□ 0.19
CNTN1-210ENST00000552248 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
CNTN1-210ENST00000552248 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
CNTN1-210ENST00000552248 ZBTB22O15209 634 aa16.12■□□□□ 0.17
CNTN1-210ENST00000552248 TRHP20396 242 aaPredicted RBP16.06■□□□□ 0.16
CNTN1-210ENST00000552248 ZNF219Q9P2Y4 722 aaPredicted RBP16.03■□□□□ 0.16
CNTN1-210ENST00000552248 DSG3P32926 999 aa15.95■□□□□ 0.14
CNTN1-210ENST00000552248 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
CNTN1-210ENST00000552248 ABCB7O75027 752 aa15.86■□□□□ 0.13
CNTN1-210ENST00000552248 ATF5Q9Y2D1 282 aaPredicted RBP15.78■□□□□ 0.12
CNTN1-210ENST00000552248 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
CNTN1-210ENST00000552248 ATXN8OSP0DMR3 200 aa15.74■□□□□ 0.11
CNTN1-210ENST00000552248 POLA2Q14181 598 aa15.69■□□□□ 0.1
CNTN1-210ENST00000552248 ZBTB12Q9Y330 459 aaPredicted RBP15.44■□□□□ 0.06
CNTN1-210ENST00000552248 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
CNTN1-210ENST00000552248 FBLN2P98095 1184 aa15.26■□□□□ 0.03
CNTN1-210ENST00000552248 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
CNTN1-210ENST00000552248 MKRN4PQ13434 485 aaPredicted RBP15.08■□□□□ 0
CNTN1-210ENST00000552248 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
CNTN1-210ENST00000552248 SPDYE2BA6NHP3 402 aa14.96□□□□□ -0.01
CNTN1-210ENST00000552248 SPDYE6P0CI01 402 aa14.96□□□□□ -0.01
CNTN1-210ENST00000552248 SPDYE2Q495Y8 402 aa14.96□□□□□ -0.01
CNTN1-210ENST00000552248 ZNF692Q9BU19 519 aaPredicted RBP14.88□□□□□ -0.03
CNTN1-210ENST00000552248 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
CNTN1-210ENST00000552248 SSUH2Q9Y2M2 353 aa14.76□□□□□ -0.05
CNTN1-210ENST00000552248 CHRDL2Q6WN34 429 aa14.75□□□□□ -0.05
CNTN1-210ENST00000552248 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
CNTN1-210ENST00000552248 POTEHQ6S545 545 aa14.67□□□□□ -0.06
CNTN1-210ENST00000552248 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
CNTN1-210ENST00000552248 SPDYE4A6NLX3 237 aa14.65□□□□□ -0.06
CNTN1-210ENST00000552248 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
CNTN1-210ENST00000552248 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
CNTN1-210ENST00000552248 PIP4P2Q8N4L2 257 aa14.48□□□□□ -0.09
CNTN1-210ENST00000552248 FXR2P51116 673 aaKnown RBP eCLIP14.43□□□□□ -0.1
CNTN1-210ENST00000552248 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
CNTN1-210ENST00000552248 STAG3Q9UJ98 1225 aa14.36□□□□□ -0.11
CNTN1-210ENST00000552248 FKBP8Q14318 412 aa14.34□□□□□ -0.11
CNTN1-210ENST00000552248 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
CNTN1-210ENST00000552248 PROM2Q8N271 834 aa14.26□□□□□ -0.13
CNTN1-210ENST00000552248 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
CNTN1-210ENST00000552248 HAX1O00165 279 aa14.16□□□□□ -0.14
CNTN1-210ENST00000552248 CREBZFQ9NS37 354 aa14.08□□□□□ -0.16
CNTN1-210ENST00000552248 FARP1Q9Y4F1 1045 aaPredicted RBP14.07□□□□□ -0.16
CNTN1-210ENST00000552248 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
CNTN1-210ENST00000552248 MIER1Q8N108 512 aa13.97□□□□□ -0.17
CNTN1-210ENST00000552248 C19orf67A6NJJ6 358 aa13.96□□□□□ -0.17
CNTN1-210ENST00000552248 FBXO3Q9UK99 471 aa13.96□□□□□ -0.17
CNTN1-210ENST00000552248 SP7Q8TDD2 431 aaPredicted RBP13.95□□□□□ -0.18
CNTN1-210ENST00000552248 NPM1P06748 294 aaKnown RBP eCLIP13.92□□□□□ -0.18
CNTN1-210ENST00000552248 PLCD3Q8N3E9 789 aa13.92□□□□□ -0.18
CNTN1-210ENST00000552248 EVX2Q03828 476 aa13.91□□□□□ -0.18
CNTN1-210ENST00000552248 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
CNTN1-210ENST00000552248 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
CNTN1-210ENST00000552248 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
CNTN1-210ENST00000552248 ZBTB47Q9UFB7 747 aaPredicted RBP13.79□□□□□ -0.2
CNTN1-210ENST00000552248 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
CNTN1-210ENST00000552248 VASPP50552 380 aaPredicted RBP13.74□□□□□ -0.21
CNTN1-210ENST00000552248 GABBR2O75899 941 aa13.67□□□□□ -0.22
CNTN1-210ENST00000552248 TSPYL2Q9H2G4 693 aaPredicted RBP13.67□□□□□ -0.22
CNTN1-210ENST00000552248 ZNF579Q8NAF0 562 aaKnown RBP13.66□□□□□ -0.22
CNTN1-210ENST00000552248 KLHL34Q8N239 644 aa13.65□□□□□ -0.22
CNTN1-210ENST00000552248 CLCN6P51797 869 aa13.62□□□□□ -0.23
CNTN1-210ENST00000552248 RASEFQ8IZ41 740 aa13.6□□□□□ -0.23
CNTN1-210ENST00000552248 PHF12Q96QT6 1004 aa13.59□□□□□ -0.23
CNTN1-210ENST00000552248 NUBP1P53384 320 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms