RNA–Protein interactions for RNA: ENST00000551998.1

UTP20-204, Transcript of UTP20, small subunit processome component, humanhuman

TSL 3

Gene UTP20, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP20-204ENST00000551998 AEBP2Q6ZN18 517 aaPredicted RBP30.35■■■□□ 2.45
UTP20-204ENST00000551998 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
UTP20-204ENST00000551998 SENP3Q9H4L4 574 aaPredicted RBP25.79■■□□□ 1.72
UTP20-204ENST00000551998 PHF23Q9BUL5 403 aaPredicted RBP25.5■■□□□ 1.67
UTP20-204ENST00000551998 FOXD1Q16676 465 aa24.12■■□□□ 1.45
UTP20-204ENST00000551998 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
UTP20-204ENST00000551998 PPP6R1Q9UPN7 881 aa22.55■■□□□ 1.2
UTP20-204ENST00000551998 MSH5O43196 834 aa22.51■■□□□ 1.19
UTP20-204ENST00000551998 PIAS4Q8N2W9 510 aaPredicted RBP22.45■■□□□ 1.18
UTP20-204ENST00000551998 ADRA2BP18089 450 aa22.42■■□□□ 1.18
UTP20-204ENST00000551998 POTEDQ86YR6 584 aa22.14■■□□□ 1.13
UTP20-204ENST00000551998 MAPK8IP2Q13387 824 aaPredicted RBP20.64■□□□□ 0.89
UTP20-204ENST00000551998 DMRT2Q9Y5R5 561 aa20.49■□□□□ 0.87
UTP20-204ENST00000551998 SCAF1Q9H7N4 1312 aaKnown RBP20.43■□□□□ 0.86
UTP20-204ENST00000551998 PPP4R3CPQ6ZMV5 832 aa20.06■□□□□ 0.8
UTP20-204ENST00000551998 HOXD11P31277 338 aaPredicted RBP19.73■□□□□ 0.75
UTP20-204ENST00000551998 CNKSR2Q8WXI2 1034 aa19.68■□□□□ 0.74
UTP20-204ENST00000551998 DCAF8L1A6NGE4 600 aa19.54■□□□□ 0.72
UTP20-204ENST00000551998 RNF216Q9NWF9 866 aaPredicted RBP19.53■□□□□ 0.72
UTP20-204ENST00000551998 CACNB1Q02641 598 aaPredicted RBP19.34■□□□□ 0.69
UTP20-204ENST00000551998 RNF39Q9H2S5 420 aa19.27■□□□□ 0.68
UTP20-204ENST00000551998 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
UTP20-204ENST00000551998 DNAJC5BQ9UF47 199 aa19.06■□□□□ 0.64
UTP20-204ENST00000551998 NPM3O75607 178 aaKnown RBP19.02■□□□□ 0.64
UTP20-204ENST00000551998 C1QBPQ07021 282 aaKnown RBP18.94■□□□□ 0.62
UTP20-204ENST00000551998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.71■□□□□ 0.59
UTP20-204ENST00000551998 KCNA4P22459 653 aa18.6■□□□□ 0.57
UTP20-204ENST00000551998 U3KPZ7 1027 aaPredicted RBP18.39■□□□□ 0.53
UTP20-204ENST00000551998 SLC4A2P04920 1241 aa18.22■□□□□ 0.51
UTP20-204ENST00000551998 SPINK5Q9NQ38 1064 aaPredicted RBP18.14■□□□□ 0.49
UTP20-204ENST00000551998 CAPN15O75808 1086 aa18.03■□□□□ 0.48
UTP20-204ENST00000551998 DSG3P32926 999 aa18.02■□□□□ 0.48
UTP20-204ENST00000551998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.74■□□□□ 0.43
UTP20-204ENST00000551998 TRHP20396 242 aaPredicted RBP17.74■□□□□ 0.43
UTP20-204ENST00000551998 HNRNPUL2Q1KMD3 747 aaKnown RBP17.74■□□□□ 0.43
UTP20-204ENST00000551998 APLP2Q06481 763 aa17.73■□□□□ 0.43
UTP20-204ENST00000551998 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
UTP20-204ENST00000551998 SAMD1Q6SPF0 538 aaPredicted RBP17.66■□□□□ 0.42
UTP20-204ENST00000551998 ABCB7O75027 752 aa17.64■□□□□ 0.41
UTP20-204ENST00000551998 MYCNP04198 464 aaPredicted RBP17.53■□□□□ 0.4
UTP20-204ENST00000551998 SLC4A1APQ9BWU0 796 aaKnown RBP17.49■□□□□ 0.39
UTP20-204ENST00000551998 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.36
UTP20-204ENST00000551998 POTEHQ6S545 545 aa17.31■□□□□ 0.36
UTP20-204ENST00000551998 POLA2Q14181 598 aa17.29■□□□□ 0.36
UTP20-204ENST00000551998 ATF5Q9Y2D1 282 aaPredicted RBP17.24■□□□□ 0.35
UTP20-204ENST00000551998 ZBTB22O15209 634 aa17.15■□□□□ 0.34
UTP20-204ENST00000551998 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
UTP20-204ENST00000551998 ZBTB12Q9Y330 459 aaPredicted RBP16.86■□□□□ 0.29
UTP20-204ENST00000551998 ATXN8OSP0DMR3 200 aa16.82■□□□□ 0.28
UTP20-204ENST00000551998 CHRDL2Q6WN34 429 aa16.8■□□□□ 0.28
UTP20-204ENST00000551998 AKT1S1Q96B36 256 aa16.74■□□□□ 0.27
UTP20-204ENST00000551998 OSCARQ8IYS5 282 aa16.73■□□□□ 0.27
UTP20-204ENST00000551998 REM2Q8IYK8 340 aaPredicted RBP16.61■□□□□ 0.25
UTP20-204ENST00000551998 PITPNM1O00562 1244 aa16.43■□□□□ 0.22
UTP20-204ENST00000551998 MKRN4PQ13434 485 aaPredicted RBP16.43■□□□□ 0.22
UTP20-204ENST00000551998 FBLN2P98095 1184 aa16.42■□□□□ 0.22
UTP20-204ENST00000551998 PIP4P2Q8N4L2 257 aa16.42■□□□□ 0.22
UTP20-204ENST00000551998 SPDYE2BA6NHP3 402 aa16.38■□□□□ 0.21
UTP20-204ENST00000551998 SPDYE6P0CI01 402 aa16.38■□□□□ 0.21
UTP20-204ENST00000551998 SPDYE2Q495Y8 402 aa16.38■□□□□ 0.21
UTP20-204ENST00000551998 FXR2P51116 673 aaKnown RBP eCLIP16.33■□□□□ 0.2
UTP20-204ENST00000551998 CSRNP3Q8WYN3 585 aa16.29■□□□□ 0.2
UTP20-204ENST00000551998 SSUH2Q9Y2M2 353 aa16.21■□□□□ 0.19
UTP20-204ENST00000551998 SP7Q8TDD2 431 aaPredicted RBP16.19■□□□□ 0.18
UTP20-204ENST00000551998 ZNF692Q9BU19 519 aaPredicted RBP16.17■□□□□ 0.18
UTP20-204ENST00000551998 SPDYE1Q8NFV5 336 aaPredicted RBP16.09■□□□□ 0.17
UTP20-204ENST00000551998 HAX1O00165 279 aa16.08■□□□□ 0.16
UTP20-204ENST00000551998 CLEC11AQ9Y240 323 aa16.05■□□□□ 0.16
UTP20-204ENST00000551998 EVX2Q03828 476 aa16■□□□□ 0.15
UTP20-204ENST00000551998 PRKAR2AP13861 404 aaKnown RBP15.98■□□□□ 0.15
UTP20-204ENST00000551998 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
UTP20-204ENST00000551998 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
UTP20-204ENST00000551998 CHADLQ6NUI6 762 aa15.81■□□□□ 0.12
UTP20-204ENST00000551998 C19orf67A6NJJ6 358 aa15.8■□□□□ 0.12
UTP20-204ENST00000551998 PRR29P0C7W0 189 aa15.79■□□□□ 0.12
UTP20-204ENST00000551998 GABBR2O75899 941 aa15.58■□□□□ 0.08
UTP20-204ENST00000551998 FARP1Q9Y4F1 1045 aaPredicted RBP15.57■□□□□ 0.08
UTP20-204ENST00000551998 SPDYE4A6NLX3 237 aa15.54■□□□□ 0.08
UTP20-204ENST00000551998 CD44P16070 742 aaKnown RBP15.46■□□□□ 0.07
UTP20-204ENST00000551998 CREBZFQ9NS37 354 aa15.46■□□□□ 0.07
UTP20-204ENST00000551998 STAG3Q9UJ98 1225 aa15.45■□□□□ 0.06
UTP20-204ENST00000551998 POTEIP0CG38 1075 aa15.3■□□□□ 0.04
UTP20-204ENST00000551998 CLCN6P51797 869 aa15.26■□□□□ 0.03
UTP20-204ENST00000551998 PROM2Q8N271 834 aa15.25■□□□□ 0.03
UTP20-204ENST00000551998 ZNF579Q8NAF0 562 aaKnown RBP15.25■□□□□ 0.03
UTP20-204ENST00000551998 MNX1P50219 401 aaPredicted RBP15.23■□□□□ 0.03
UTP20-204ENST00000551998 ZRANB1Q9UGI0 708 aa15.23■□□□□ 0.03
UTP20-204ENST00000551998 LHX8Q68G74 356 aa15.19■□□□□ 0.02
UTP20-204ENST00000551998 GALR2O43603 387 aaPredicted RBP15.08■□□□□ 0
UTP20-204ENST00000551998 NPM1P06748 294 aaKnown RBP eCLIP15.08■□□□□ 0
UTP20-204ENST00000551998 DCBLD2Q96PD2 775 aa15.06■□□□□ 0
UTP20-204ENST00000551998 PHF12Q96QT6 1004 aa15.04■□□□□ -0
UTP20-204ENST00000551998 PAK3O75914 559 aaPredicted RBP15.02■□□□□ -0
UTP20-204ENST00000551998 PELP1Q8IZL8 1130 aaKnown RBP14.84□□□□□ -0.03
UTP20-204ENST00000551998 MS4A3Q96HJ5 214 aa14.84□□□□□ -0.03
UTP20-204ENST00000551998 TSPYL2Q9H2G4 693 aaPredicted RBP14.83□□□□□ -0.04
UTP20-204ENST00000551998 CCDC61Q9Y6R9 512 aa14.83□□□□□ -0.04
UTP20-204ENST00000551998 MIER1Q8N108 512 aa14.81□□□□□ -0.04
UTP20-204ENST00000551998 POTEB2H3BUK9 544 aa14.8□□□□□ -0.04
UTP20-204ENST00000551998 ASTLQ6HA08 431 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms