RNA–Protein interactions for RNA: ENST00000551831.5

ATF1-203, Transcript of activating transcription factor 1, humanhuman

TSL 2

Gene ATF1, Length 970 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-203ENST00000551831 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
ATF1-203ENST00000551831 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
ATF1-203ENST00000551831 SENP3Q9H4L4 574 aaPredicted RBP19.88■□□□□ 0.77
ATF1-203ENST00000551831 PHF23Q9BUL5 403 aaPredicted RBP19.8■□□□□ 0.76
ATF1-203ENST00000551831 FOXD1Q16676 465 aa18.53■□□□□ 0.56
ATF1-203ENST00000551831 PLPPR3Q6T4P5 718 aa18.15■□□□□ 0.5
ATF1-203ENST00000551831 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
ATF1-203ENST00000551831 ADRA2BP18089 450 aa17.58■□□□□ 0.4
ATF1-203ENST00000551831 PIAS4Q8N2W9 510 aaPredicted RBP17.39■□□□□ 0.37
ATF1-203ENST00000551831 MSH5O43196 834 aa17.16■□□□□ 0.34
ATF1-203ENST00000551831 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
ATF1-203ENST00000551831 MAPK8IP2Q13387 824 aaPredicted RBP16.07■□□□□ 0.16
ATF1-203ENST00000551831 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
ATF1-203ENST00000551831 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
ATF1-203ENST00000551831 DMRT2Q9Y5R5 561 aa15.81■□□□□ 0.12
ATF1-203ENST00000551831 CNKSR2Q8WXI2 1034 aa15.58■□□□□ 0.08
ATF1-203ENST00000551831 NCBP3Q53F19 620 aaKnown RBP15.45■□□□□ 0.06
ATF1-203ENST00000551831 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
ATF1-203ENST00000551831 RNF216Q9NWF9 866 aaPredicted RBP15.34■□□□□ 0.05
ATF1-203ENST00000551831 KCNA4P22459 653 aa15.26■□□□□ 0.03
ATF1-203ENST00000551831 DCAF8L1A6NGE4 600 aa15.25■□□□□ 0.03
ATF1-203ENST00000551831 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
ATF1-203ENST00000551831 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
ATF1-203ENST00000551831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.06
ATF1-203ENST00000551831 RNF39Q9H2S5 420 aa14.69□□□□□ -0.06
ATF1-203ENST00000551831 CACNB1Q02641 598 aaPredicted RBP14.59□□□□□ -0.07
ATF1-203ENST00000551831 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
ATF1-203ENST00000551831 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
ATF1-203ENST00000551831 SLC4A1APQ9BWU0 796 aaKnown RBP14.47□□□□□ -0.09
ATF1-203ENST00000551831 U3KPZ7 1027 aaPredicted RBP14.39□□□□□ -0.11
ATF1-203ENST00000551831 SPINK5Q9NQ38 1064 aaPredicted RBP14.12□□□□□ -0.15
ATF1-203ENST00000551831 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
ATF1-203ENST00000551831 CAPN15O75808 1086 aa14.08□□□□□ -0.16
ATF1-203ENST00000551831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.07□□□□□ -0.16
ATF1-203ENST00000551831 HNRNPUL2Q1KMD3 747 aaKnown RBP14.07□□□□□ -0.16
ATF1-203ENST00000551831 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
ATF1-203ENST00000551831 ZBTB22O15209 634 aa14.03□□□□□ -0.16
ATF1-203ENST00000551831 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
ATF1-203ENST00000551831 APLP2Q06481 763 aa13.99□□□□□ -0.17
ATF1-203ENST00000551831 TRHP20396 242 aaPredicted RBP13.95□□□□□ -0.18
ATF1-203ENST00000551831 DSG3P32926 999 aa13.88□□□□□ -0.19
ATF1-203ENST00000551831 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
ATF1-203ENST00000551831 ABCB7O75027 752 aa13.8□□□□□ -0.2
ATF1-203ENST00000551831 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
ATF1-203ENST00000551831 EHMT2Q96KQ7 1210 aa13.73□□□□□ -0.21
ATF1-203ENST00000551831 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
ATF1-203ENST00000551831 POLA2Q14181 598 aa13.65□□□□□ -0.22
ATF1-203ENST00000551831 ATXN8OSP0DMR3 200 aa13.61□□□□□ -0.23
ATF1-203ENST00000551831 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
ATF1-203ENST00000551831 RBM42Q9BTD8 480 aaKnown RBP13.21□□□□□ -0.29
ATF1-203ENST00000551831 FBLN2P98095 1184 aa13.18□□□□□ -0.3
ATF1-203ENST00000551831 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
ATF1-203ENST00000551831 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
ATF1-203ENST00000551831 AKT1S1Q96B36 256 aa12.99□□□□□ -0.33
ATF1-203ENST00000551831 SPDYE2BA6NHP3 402 aa12.95□□□□□ -0.34
ATF1-203ENST00000551831 SPDYE6P0CI01 402 aa12.95□□□□□ -0.34
ATF1-203ENST00000551831 SPDYE2Q495Y8 402 aa12.95□□□□□ -0.34
ATF1-203ENST00000551831 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
ATF1-203ENST00000551831 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
ATF1-203ENST00000551831 CHRDL2Q6WN34 429 aa12.82□□□□□ -0.36
ATF1-203ENST00000551831 SSUH2Q9Y2M2 353 aa12.8□□□□□ -0.36
ATF1-203ENST00000551831 POTEHQ6S545 545 aa12.78□□□□□ -0.36
ATF1-203ENST00000551831 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
ATF1-203ENST00000551831 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
ATF1-203ENST00000551831 SPDYE4A6NLX3 237 aa12.69□□□□□ -0.38
ATF1-203ENST00000551831 CLEC11AQ9Y240 323 aa12.68□□□□□ -0.38
ATF1-203ENST00000551831 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
ATF1-203ENST00000551831 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
ATF1-203ENST00000551831 FXR2P51116 673 aaKnown RBP eCLIP12.55□□□□□ -0.4
ATF1-203ENST00000551831 PRR29P0C7W0 189 aa12.5□□□□□ -0.41
ATF1-203ENST00000551831 PRKAR2AP13861 404 aaKnown RBP12.44□□□□□ -0.42
ATF1-203ENST00000551831 FKBP8Q14318 412 aa12.41□□□□□ -0.42
ATF1-203ENST00000551831 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
ATF1-203ENST00000551831 STAG3Q9UJ98 1225 aa12.4□□□□□ -0.42
ATF1-203ENST00000551831 PROM2Q8N271 834 aa12.36□□□□□ -0.43
ATF1-203ENST00000551831 HAX1O00165 279 aa12.32□□□□□ -0.44
ATF1-203ENST00000551831 CREBZFQ9NS37 354 aa12.24□□□□□ -0.45
ATF1-203ENST00000551831 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
ATF1-203ENST00000551831 EVX2Q03828 476 aa12.19□□□□□ -0.46
ATF1-203ENST00000551831 C19orf67A6NJJ6 358 aa12.14□□□□□ -0.47
ATF1-203ENST00000551831 SP7Q8TDD2 431 aaPredicted RBP12.13□□□□□ -0.47
ATF1-203ENST00000551831 MIER1Q8N108 512 aa12.11□□□□□ -0.47
ATF1-203ENST00000551831 CD44P16070 742 aaKnown RBP12.06□□□□□ -0.48
ATF1-203ENST00000551831 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
ATF1-203ENST00000551831 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
ATF1-203ENST00000551831 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
ATF1-203ENST00000551831 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.49
ATF1-203ENST00000551831 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
ATF1-203ENST00000551831 ZRANB1Q9UGI0 708 aa11.96□□□□□ -0.49
ATF1-203ENST00000551831 GABBR2O75899 941 aa11.91□□□□□ -0.5
ATF1-203ENST00000551831 PAK3O75914 559 aaPredicted RBP11.91□□□□□ -0.5
ATF1-203ENST00000551831 VASPP50552 380 aaPredicted RBP11.87□□□□□ -0.51
ATF1-203ENST00000551831 TSPYL2Q9H2G4 693 aaPredicted RBP11.87□□□□□ -0.51
ATF1-203ENST00000551831 ZBTB47Q9UFB7 747 aaPredicted RBP11.86□□□□□ -0.51
ATF1-203ENST00000551831 ZNF579Q8NAF0 562 aaKnown RBP11.84□□□□□ -0.51
ATF1-203ENST00000551831 PHF12Q96QT6 1004 aa11.82□□□□□ -0.52
ATF1-203ENST00000551831 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
ATF1-203ENST00000551831 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
ATF1-203ENST00000551831 NUBP1P53384 320 aa11.77□□□□□ -0.53
ATF1-203ENST00000551831 CLCN6P51797 869 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms