RNA–Protein interactions for RNA: ENST00000551754.1

NOVA1-212, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 3

Gene NOVA1, Length 488 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-212ENST00000551754 AEBP2Q6ZN18 517 aaPredicted RBP15.27■□□□□ 0.04
NOVA1-212ENST00000551754 CHIC1Q5VXU3 224 aa14.42□□□□□ -0.1
NOVA1-212ENST00000551754 SENP3Q9H4L4 574 aaPredicted RBP12.88□□□□□ -0.35
NOVA1-212ENST00000551754 PHF23Q9BUL5 403 aaPredicted RBP12.74□□□□□ -0.37
NOVA1-212ENST00000551754 FOXD1Q16676 465 aa12.08□□□□□ -0.48
NOVA1-212ENST00000551754 POTEDQ86YR6 584 aa11.63□□□□□ -0.55
NOVA1-212ENST00000551754 PLPPR3Q6T4P5 718 aa11.46□□□□□ -0.57
NOVA1-212ENST00000551754 PPP6R1Q9UPN7 881 aa11.34□□□□□ -0.59
NOVA1-212ENST00000551754 ADRA2BP18089 450 aa11.26□□□□□ -0.61
NOVA1-212ENST00000551754 PIAS4Q8N2W9 510 aaPredicted RBP11.24□□□□□ -0.61
NOVA1-212ENST00000551754 MSH5O43196 834 aa11.2□□□□□ -0.62
NOVA1-212ENST00000551754 MAPK8IP2Q13387 824 aaPredicted RBP10.36□□□□□ -0.75
NOVA1-212ENST00000551754 DMRT2Q9Y5R5 561 aa10.26□□□□□ -0.77
NOVA1-212ENST00000551754 SCAF1Q9H7N4 1312 aaKnown RBP10.13□□□□□ -0.79
NOVA1-212ENST00000551754 PPP4R3CPQ6ZMV5 832 aa10.08□□□□□ -0.8
NOVA1-212ENST00000551754 HOXD11P31277 338 aaPredicted RBP9.9□□□□□ -0.82
NOVA1-212ENST00000551754 CNKSR2Q8WXI2 1034 aa9.85□□□□□ -0.83
NOVA1-212ENST00000551754 RNF216Q9NWF9 866 aaPredicted RBP9.78□□□□□ -0.84
NOVA1-212ENST00000551754 DCAF8L1A6NGE4 600 aa9.74□□□□□ -0.85
NOVA1-212ENST00000551754 RNF39Q9H2S5 420 aa9.63□□□□□ -0.87
NOVA1-212ENST00000551754 NPM3O75607 178 aaKnown RBP9.59□□□□□ -0.87
NOVA1-212ENST00000551754 CACNB1Q02641 598 aaPredicted RBP9.59□□□□□ -0.87
NOVA1-212ENST00000551754 NCBP3Q53F19 620 aaKnown RBP9.58□□□□□ -0.88
NOVA1-212ENST00000551754 DNAJC5BQ9UF47 199 aa9.5□□□□□ -0.89
NOVA1-212ENST00000551754 KCNA4P22459 653 aa9.43□□□□□ -0.9
NOVA1-212ENST00000551754 C1QBPQ07021 282 aaKnown RBP9.42□□□□□ -0.9
NOVA1-212ENST00000551754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.32□□□□□ -0.92
NOVA1-212ENST00000551754 U3KPZ7 1027 aaPredicted RBP9.25□□□□□ -0.93
NOVA1-212ENST00000551754 SLC4A2P04920 1241 aa9.2□□□□□ -0.94
NOVA1-212ENST00000551754 SPINK5Q9NQ38 1064 aaPredicted RBP9.12□□□□□ -0.95
NOVA1-212ENST00000551754 DSG3P32926 999 aa9.02□□□□□ -0.97
NOVA1-212ENST00000551754 CAPN15O75808 1086 aa8.99□□□□□ -0.97
NOVA1-212ENST00000551754 POTEHQ6S545 545 aa8.89□□□□□ -0.99
NOVA1-212ENST00000551754 APLP2Q06481 763 aa8.88□□□□□ -0.99
NOVA1-212ENST00000551754 TRHP20396 242 aaPredicted RBP8.87□□□□□ -0.99
NOVA1-212ENST00000551754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.86□□□□□ -0.99
NOVA1-212ENST00000551754 ABCB7O75027 752 aa8.86□□□□□ -0.99
NOVA1-212ENST00000551754 HNRNPUL2Q1KMD3 747 aaKnown RBP8.86□□□□□ -0.99
NOVA1-212ENST00000551754 SLC4A1APQ9BWU0 796 aaKnown RBP8.83□□□□□ -1
NOVA1-212ENST00000551754 ZNF219Q9P2Y4 722 aaPredicted RBP8.83□□□□□ -1
NOVA1-212ENST00000551754 MYCNP04198 464 aaPredicted RBP8.82□□□□□ -1
NOVA1-212ENST00000551754 SAMD1Q6SPF0 538 aaPredicted RBP8.82□□□□□ -1
NOVA1-212ENST00000551754 ZBTB22O15209 634 aa8.75□□□□□ -1.01
NOVA1-212ENST00000551754 FOXD4L1Q9NU39 408 aa8.74□□□□□ -1.01
NOVA1-212ENST00000551754 ATF5Q9Y2D1 282 aaPredicted RBP8.72□□□□□ -1.01
NOVA1-212ENST00000551754 POLA2Q14181 598 aa8.64□□□□□ -1.03
NOVA1-212ENST00000551754 RBM42Q9BTD8 480 aaKnown RBP8.51□□□□□ -1.05
NOVA1-212ENST00000551754 ATXN8OSP0DMR3 200 aa8.43□□□□□ -1.06
NOVA1-212ENST00000551754 OSCARQ8IYS5 282 aa8.43□□□□□ -1.06
NOVA1-212ENST00000551754 ZBTB12Q9Y330 459 aaPredicted RBP8.42□□□□□ -1.06
NOVA1-212ENST00000551754 CHRDL2Q6WN34 429 aa8.38□□□□□ -1.07
NOVA1-212ENST00000551754 AKT1S1Q96B36 256 aa8.35□□□□□ -1.07
NOVA1-212ENST00000551754 MKRN4PQ13434 485 aaPredicted RBP8.32□□□□□ -1.08
NOVA1-212ENST00000551754 REM2Q8IYK8 340 aaPredicted RBP8.3□□□□□ -1.08
NOVA1-212ENST00000551754 CSRNP3Q8WYN3 585 aa8.28□□□□□ -1.08
NOVA1-212ENST00000551754 PITPNM1O00562 1244 aa8.25□□□□□ -1.09
NOVA1-212ENST00000551754 PIP4P2Q8N4L2 257 aa8.21□□□□□ -1.1
NOVA1-212ENST00000551754 SPDYE2BA6NHP3 402 aa8.2□□□□□ -1.1
NOVA1-212ENST00000551754 SPDYE6P0CI01 402 aa8.2□□□□□ -1.1
NOVA1-212ENST00000551754 FBLN2P98095 1184 aa8.2□□□□□ -1.1
NOVA1-212ENST00000551754 SPDYE2Q495Y8 402 aa8.2□□□□□ -1.1
NOVA1-212ENST00000551754 SSUH2Q9Y2M2 353 aa8.17□□□□□ -1.1
NOVA1-212ENST00000551754 FXR2P51116 673 aaKnown RBP eCLIP8.16□□□□□ -1.1
NOVA1-212ENST00000551754 EHMT2Q96KQ7 1210 aa8.13□□□□□ -1.11
NOVA1-212ENST00000551754 ZNF692Q9BU19 519 aaPredicted RBP8.07□□□□□ -1.12
NOVA1-212ENST00000551754 SP7Q8TDD2 431 aaPredicted RBP8.06□□□□□ -1.12
NOVA1-212ENST00000551754 EVX2Q03828 476 aa8.02□□□□□ -1.13
NOVA1-212ENST00000551754 SPDYE1Q8NFV5 336 aaPredicted RBP8.02□□□□□ -1.13
NOVA1-212ENST00000551754 CLEC11AQ9Y240 323 aa8.01□□□□□ -1.13
NOVA1-212ENST00000551754 PRKAR2AP13861 404 aaKnown RBP7.99□□□□□ -1.13
NOVA1-212ENST00000551754 PABPN1Q86U42 306 aaKnown RBP eCLIP7.99□□□□□ -1.13
NOVA1-212ENST00000551754 HAX1O00165 279 aa7.97□□□□□ -1.13
NOVA1-212ENST00000551754 CHADLQ6NUI6 762 aa7.94□□□□□ -1.14
NOVA1-212ENST00000551754 C19orf67A6NJJ6 358 aa7.9□□□□□ -1.14
NOVA1-212ENST00000551754 PRR29P0C7W0 189 aa7.86□□□□□ -1.15
NOVA1-212ENST00000551754 SPDYE4A6NLX3 237 aa7.82□□□□□ -1.16
NOVA1-212ENST00000551754 CREBZFQ9NS37 354 aa7.78□□□□□ -1.16
NOVA1-212ENST00000551754 FARP1Q9Y4F1 1045 aaPredicted RBP7.78□□□□□ -1.16
NOVA1-212ENST00000551754 GABBR2O75899 941 aa7.76□□□□□ -1.17
NOVA1-212ENST00000551754 PLSCR2Q9NRY7 297 aa7.76□□□□□ -1.17
NOVA1-212ENST00000551754 PROM2Q8N271 834 aa7.74□□□□□ -1.17
NOVA1-212ENST00000551754 CD44P16070 742 aaKnown RBP7.73□□□□□ -1.17
NOVA1-212ENST00000551754 STAG3Q9UJ98 1225 aa7.72□□□□□ -1.17
NOVA1-212ENST00000551754 MNX1P50219 401 aaPredicted RBP7.69□□□□□ -1.18
NOVA1-212ENST00000551754 POTEIP0CG38 1075 aa7.68□□□□□ -1.18
NOVA1-212ENST00000551754 ZNF579Q8NAF0 562 aaKnown RBP7.65□□□□□ -1.18
NOVA1-212ENST00000551754 CLCN6P51797 869 aa7.62□□□□□ -1.19
NOVA1-212ENST00000551754 ZRANB1Q9UGI0 708 aa7.6□□□□□ -1.19
NOVA1-212ENST00000551754 GALR2O43603 387 aaPredicted RBP7.58□□□□□ -1.2
NOVA1-212ENST00000551754 PHF12Q96QT6 1004 aa7.57□□□□□ -1.2
NOVA1-212ENST00000551754 LHX8Q68G74 356 aa7.54□□□□□ -1.2
NOVA1-212ENST00000551754 NPM1P06748 294 aaKnown RBP eCLIP7.51□□□□□ -1.21
NOVA1-212ENST00000551754 PAK3O75914 559 aaPredicted RBP7.49□□□□□ -1.21
NOVA1-212ENST00000551754 MS4A3Q96HJ5 214 aa7.47□□□□□ -1.21
NOVA1-212ENST00000551754 DCBLD2Q96PD2 775 aa7.47□□□□□ -1.21
NOVA1-212ENST00000551754 CCDC61Q9Y6R9 512 aa7.46□□□□□ -1.22
NOVA1-212ENST00000551754 FKBP8Q14318 412 aa7.45□□□□□ -1.22
NOVA1-212ENST00000551754 PELP1Q8IZL8 1130 aaKnown RBP7.45□□□□□ -1.22
NOVA1-212ENST00000551754 RASEFQ8IZ41 740 aa7.44□□□□□ -1.22
NOVA1-212ENST00000551754 POTEB2H3BUK9 544 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms