RNA–Protein interactions for RNA: ENST00000551487.1

ZFC3H1-210, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 3

Gene ZFC3H1, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-210ENST00000551487 AEBP2Q6ZN18 517 aaPredicted RBP24.58■■□□□ 1.53
ZFC3H1-210ENST00000551487 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
ZFC3H1-210ENST00000551487 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
ZFC3H1-210ENST00000551487 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
ZFC3H1-210ENST00000551487 FOXD1Q16676 465 aa19.7■□□□□ 0.74
ZFC3H1-210ENST00000551487 POTEDQ86YR6 584 aa19.18■□□□□ 0.66
ZFC3H1-210ENST00000551487 MSH5O43196 834 aa18.69■□□□□ 0.58
ZFC3H1-210ENST00000551487 PIAS4Q8N2W9 510 aaPredicted RBP18.27■□□□□ 0.52
ZFC3H1-210ENST00000551487 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
ZFC3H1-210ENST00000551487 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
ZFC3H1-210ENST00000551487 ADRA2BP18089 450 aa17.88■□□□□ 0.45
ZFC3H1-210ENST00000551487 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
ZFC3H1-210ENST00000551487 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
ZFC3H1-210ENST00000551487 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
ZFC3H1-210ENST00000551487 CACNB1Q02641 598 aaPredicted RBP16.36■□□□□ 0.21
ZFC3H1-210ENST00000551487 DCAF8L1A6NGE4 600 aa15.94■□□□□ 0.14
ZFC3H1-210ENST00000551487 RNF39Q9H2S5 420 aa15.89■□□□□ 0.13
ZFC3H1-210ENST00000551487 HOXD11P31277 338 aaPredicted RBP15.81■□□□□ 0.12
ZFC3H1-210ENST00000551487 PPP4R3CPQ6ZMV5 832 aa15.67■□□□□ 0.1
ZFC3H1-210ENST00000551487 C1QBPQ07021 282 aaKnown RBP15.64■□□□□ 0.09
ZFC3H1-210ENST00000551487 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
ZFC3H1-210ENST00000551487 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
ZFC3H1-210ENST00000551487 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
ZFC3H1-210ENST00000551487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -03e-6■■□□□ 11.7
ZFC3H1-210ENST00000551487 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
ZFC3H1-210ENST00000551487 POTEHQ6S545 545 aa14.93□□□□□ -0.02
ZFC3H1-210ENST00000551487 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
ZFC3H1-210ENST00000551487 DSG3P32926 999 aa14.68□□□□□ -0.06
ZFC3H1-210ENST00000551487 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
ZFC3H1-210ENST00000551487 CAPN15O75808 1086 aa14.61□□□□□ -0.07
ZFC3H1-210ENST00000551487 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
ZFC3H1-210ENST00000551487 KCNA4P22459 653 aa14.54□□□□□ -0.08
ZFC3H1-210ENST00000551487 APLP2Q06481 763 aa14.24□□□□□ -0.13
ZFC3H1-210ENST00000551487 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
ZFC3H1-210ENST00000551487 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
ZFC3H1-210ENST00000551487 ABCB7O75027 752 aa14.2□□□□□ -0.14
ZFC3H1-210ENST00000551487 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
ZFC3H1-210ENST00000551487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.09□□□□□ -0.15
ZFC3H1-210ENST00000551487 HNRNPUL2Q1KMD3 747 aaKnown RBP14.09□□□□□ -0.15
ZFC3H1-210ENST00000551487 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
ZFC3H1-210ENST00000551487 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
ZFC3H1-210ENST00000551487 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
ZFC3H1-210ENST00000551487 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
ZFC3H1-210ENST00000551487 POLA2Q14181 598 aa13.73□□□□□ -0.21
ZFC3H1-210ENST00000551487 SP7Q8TDD2 431 aaPredicted RBP13.73□□□□□ -0.21
ZFC3H1-210ENST00000551487 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
ZFC3H1-210ENST00000551487 AKT1S1Q96B36 256 aa13.59□□□□□ -0.23
ZFC3H1-210ENST00000551487 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
ZFC3H1-210ENST00000551487 PIP4P2Q8N4L2 257 aa13.48□□□□□ -0.25
ZFC3H1-210ENST00000551487 REM2Q8IYK8 340 aaPredicted RBP13.45□□□□□ -0.26
ZFC3H1-210ENST00000551487 ZBTB12Q9Y330 459 aaPredicted RBP13.45□□□□□ -0.26
ZFC3H1-210ENST00000551487 HAX1O00165 279 aa13.38□□□□□ -0.27
ZFC3H1-210ENST00000551487 ZBTB22O15209 634 aa13.36□□□□□ -0.27
ZFC3H1-210ENST00000551487 FXR2P51116 673 aaKnown RBP eCLIP13.33□□□□□ -0.28
ZFC3H1-210ENST00000551487 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
ZFC3H1-210ENST00000551487 OSCARQ8IYS5 282 aa13.31□□□□□ -0.28
ZFC3H1-210ENST00000551487 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
ZFC3H1-210ENST00000551487 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
ZFC3H1-210ENST00000551487 EVX2Q03828 476 aa13.16□□□□□ -0.3
ZFC3H1-210ENST00000551487 SPDYE2BA6NHP3 402 aa12.98□□□□□ -0.33
ZFC3H1-210ENST00000551487 SPDYE6P0CI01 402 aa12.98□□□□□ -0.33
ZFC3H1-210ENST00000551487 SPDYE2Q495Y8 402 aa12.98□□□□□ -0.33
ZFC3H1-210ENST00000551487 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
ZFC3H1-210ENST00000551487 C19orf67A6NJJ6 358 aa12.92□□□□□ -0.34
ZFC3H1-210ENST00000551487 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
ZFC3H1-210ENST00000551487 SPDYE1Q8NFV5 336 aaPredicted RBP12.88□□□□□ -0.35
ZFC3H1-210ENST00000551487 LHX8Q68G74 356 aa12.87□□□□□ -0.35
ZFC3H1-210ENST00000551487 GABBR2O75899 941 aa12.86□□□□□ -0.35
ZFC3H1-210ENST00000551487 FBLN2P98095 1184 aa12.85□□□□□ -0.35
ZFC3H1-210ENST00000551487 CLEC11AQ9Y240 323 aa12.85□□□□□ -0.35
ZFC3H1-210ENST00000551487 EHMT2Q96KQ7 1210 aa12.75□□□□□ -0.37
ZFC3H1-210ENST00000551487 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
ZFC3H1-210ENST00000551487 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
ZFC3H1-210ENST00000551487 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
ZFC3H1-210ENST00000551487 CHADLQ6NUI6 762 aa12.67□□□□□ -0.38
ZFC3H1-210ENST00000551487 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
ZFC3H1-210ENST00000551487 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
ZFC3H1-210ENST00000551487 CLCN6P51797 869 aa12.52□□□□□ -0.41
ZFC3H1-210ENST00000551487 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
ZFC3H1-210ENST00000551487 PABPN1Q86U42 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
ZFC3H1-210ENST00000551487 PLSCR2Q9NRY7 297 aa12.49□□□□□ -0.41
ZFC3H1-210ENST00000551487 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
ZFC3H1-210ENST00000551487 DCBLD2Q96PD2 775 aa12.39□□□□□ -0.43
ZFC3H1-210ENST00000551487 ZNF579Q8NAF0 562 aaKnown RBP12.31□□□□□ -0.44
ZFC3H1-210ENST00000551487 ZRANB1Q9UGI0 708 aa12.24□□□□□ -0.45
ZFC3H1-210ENST00000551487 OTUD5Q96G74 571 aa12.22□□□□□ -0.45
ZFC3H1-210ENST00000551487 GALR2O43603 387 aaPredicted RBP12.17□□□□□ -0.46
ZFC3H1-210ENST00000551487 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.46
ZFC3H1-210ENST00000551487 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
ZFC3H1-210ENST00000551487 POTEMA6NI47 508 aa12.13□□□□□ -0.47
ZFC3H1-210ENST00000551487 POTEB2H3BUK9 544 aa12.13□□□□□ -0.47
ZFC3H1-210ENST00000551487 POTEGQ6S5H5 508 aa12.09□□□□□ -0.47
ZFC3H1-210ENST00000551487 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
ZFC3H1-210ENST00000551487 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
ZFC3H1-210ENST00000551487 PCDH10Q9P2E7 1040 aa12.03□□□□□ -0.48
ZFC3H1-210ENST00000551487 PHF12Q96QT6 1004 aa12.01□□□□□ -0.49
ZFC3H1-210ENST00000551487 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
ZFC3H1-210ENST00000551487 PROM2Q8N271 834 aa11.92□□□□□ -0.5
ZFC3H1-210ENST00000551487 NPM1P06748 294 aaKnown RBP eCLIP11.91□□□□□ -0.5
ZFC3H1-210ENST00000551487 ASTLQ6HA08 431 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms