RNA–Protein interactions for RNA: ENST00000551484.1

CDK17-208, Transcript of cyclin dependent kinase 17, humanhuman

TSL 4

Gene CDK17, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-208ENST00000551484 AEBP2Q6ZN18 517 aaPredicted RBP29.24■■■□□ 2.27
CDK17-208ENST00000551484 CHIC1Q5VXU3 224 aa27.57■■■□□ 2
CDK17-208ENST00000551484 SENP3Q9H4L4 574 aaPredicted RBP24.85■■□□□ 1.57
CDK17-208ENST00000551484 PHF23Q9BUL5 403 aaPredicted RBP24.58■■□□□ 1.53
CDK17-208ENST00000551484 FOXD1Q16676 465 aa23.25■■□□□ 1.31
CDK17-208ENST00000551484 PLPPR3Q6T4P5 718 aa21.95■■□□□ 1.1
CDK17-208ENST00000551484 PIAS4Q8N2W9 510 aaPredicted RBP21.73■■□□□ 1.07
CDK17-208ENST00000551484 MSH5O43196 834 aa21.71■■□□□ 1.07
CDK17-208ENST00000551484 PPP6R1Q9UPN7 881 aa21.7■■□□□ 1.06
CDK17-208ENST00000551484 ADRA2BP18089 450 aa21.66■■□□□ 1.06
CDK17-208ENST00000551484 POTEDQ86YR6 584 aa21.49■■□□□ 1.03
CDK17-208ENST00000551484 MAPK8IP2Q13387 824 aaPredicted RBP19.95■□□□□ 0.78
CDK17-208ENST00000551484 DMRT2Q9Y5R5 561 aa19.69■□□□□ 0.74
CDK17-208ENST00000551484 SCAF1Q9H7N4 1312 aaKnown RBP19.65■□□□□ 0.74
CDK17-208ENST00000551484 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
CDK17-208ENST00000551484 DCAF8L1A6NGE4 600 aa19.09■□□□□ 0.65
CDK17-208ENST00000551484 HOXD11P31277 338 aaPredicted RBP18.89■□□□□ 0.61
CDK17-208ENST00000551484 CNKSR2Q8WXI2 1034 aa18.89■□□□□ 0.61
CDK17-208ENST00000551484 CACNB1Q02641 598 aaPredicted RBP18.82■□□□□ 0.6
CDK17-208ENST00000551484 RNF216Q9NWF9 866 aaPredicted RBP18.73■□□□□ 0.59
CDK17-208ENST00000551484 RNF39Q9H2S5 420 aa18.55■□□□□ 0.56
CDK17-208ENST00000551484 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
CDK17-208ENST00000551484 NPM3O75607 178 aaKnown RBP18.25■□□□□ 0.51
CDK17-208ENST00000551484 C1QBPQ07021 282 aaKnown RBP18.22■□□□□ 0.51
CDK17-208ENST00000551484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
CDK17-208ENST00000551484 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
CDK17-208ENST00000551484 KCNA4P22459 653 aa17.86■□□□□ 0.45
CDK17-208ENST00000551484 U3KPZ7 1027 aaPredicted RBP17.7■□□□□ 0.42
CDK17-208ENST00000551484 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
CDK17-208ENST00000551484 CAPN15O75808 1086 aa17.52■□□□□ 0.4
CDK17-208ENST00000551484 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
CDK17-208ENST00000551484 DSG3P32926 999 aa17.36■□□□□ 0.37
CDK17-208ENST00000551484 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
CDK17-208ENST00000551484 ABCB7O75027 752 aa17.16■□□□□ 0.34
CDK17-208ENST00000551484 APLP2Q06481 763 aa17.07■□□□□ 0.32
CDK17-208ENST00000551484 ZNF219Q9P2Y4 722 aaPredicted RBP17.05■□□□□ 0.32
CDK17-208ENST00000551484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.04■□□□□ 0.32
CDK17-208ENST00000551484 HNRNPUL2Q1KMD3 747 aaKnown RBP17.04■□□□□ 0.32
CDK17-208ENST00000551484 SAMD1Q6SPF0 538 aaPredicted RBP16.98■□□□□ 0.31
CDK17-208ENST00000551484 MYCNP04198 464 aaPredicted RBP16.83■□□□□ 0.28
CDK17-208ENST00000551484 POTEHQ6S545 545 aa16.81■□□□□ 0.28
CDK17-208ENST00000551484 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
CDK17-208ENST00000551484 POLA2Q14181 598 aa16.68■□□□□ 0.26
CDK17-208ENST00000551484 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
CDK17-208ENST00000551484 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
CDK17-208ENST00000551484 RBM42Q9BTD8 480 aaKnown RBP16.49■□□□□ 0.23
CDK17-208ENST00000551484 ZBTB22O15209 634 aa16.43■□□□□ 0.22
CDK17-208ENST00000551484 CHRDL2Q6WN34 429 aa16.26■□□□□ 0.19
CDK17-208ENST00000551484 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
CDK17-208ENST00000551484 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
CDK17-208ENST00000551484 AKT1S1Q96B36 256 aa16.11■□□□□ 0.17
CDK17-208ENST00000551484 REM2Q8IYK8 340 aaPredicted RBP16.03■□□□□ 0.16
CDK17-208ENST00000551484 ATXN8OSP0DMR3 200 aa16.01■□□□□ 0.15
CDK17-208ENST00000551484 PITPNM1O00562 1244 aa15.89■□□□□ 0.13
CDK17-208ENST00000551484 PIP4P2Q8N4L2 257 aa15.88■□□□□ 0.13
CDK17-208ENST00000551484 FBLN2P98095 1184 aa15.84■□□□□ 0.13
CDK17-208ENST00000551484 MKRN4PQ13434 485 aaPredicted RBP15.76■□□□□ 0.11
CDK17-208ENST00000551484 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
CDK17-208ENST00000551484 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
CDK17-208ENST00000551484 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
CDK17-208ENST00000551484 FXR2P51116 673 aaKnown RBP eCLIP15.69■□□□□ 0.1
CDK17-208ENST00000551484 SP7Q8TDD2 431 aaPredicted RBP15.69■□□□□ 0.1
CDK17-208ENST00000551484 HAX1O00165 279 aa15.65■□□□□ 0.1
CDK17-208ENST00000551484 CLEC11AQ9Y240 323 aa15.62■□□□□ 0.09
CDK17-208ENST00000551484 ZNF692Q9BU19 519 aaPredicted RBP15.61■□□□□ 0.09
CDK17-208ENST00000551484 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
CDK17-208ENST00000551484 SSUH2Q9Y2M2 353 aa15.52■□□□□ 0.08
CDK17-208ENST00000551484 SPDYE1Q8NFV5 336 aaPredicted RBP15.51■□□□□ 0.07
CDK17-208ENST00000551484 PRKAR2AP13861 404 aaKnown RBP15.48■□□□□ 0.07
CDK17-208ENST00000551484 EVX2Q03828 476 aa15.47■□□□□ 0.07
CDK17-208ENST00000551484 EHMT2Q96KQ7 1210 aa15.41■□□□□ 0.06
CDK17-208ENST00000551484 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
CDK17-208ENST00000551484 CHADLQ6NUI6 762 aa15.36■□□□□ 0.05
CDK17-208ENST00000551484 PRR29P0C7W0 189 aa15.27■□□□□ 0.04
CDK17-208ENST00000551484 C19orf67A6NJJ6 358 aa15.2■□□□□ 0.02
CDK17-208ENST00000551484 GABBR2O75899 941 aa15.06■□□□□ 0
CDK17-208ENST00000551484 FARP1Q9Y4F1 1045 aaPredicted RBP15.01□□□□□ -0.01
CDK17-208ENST00000551484 CD44P16070 742 aaKnown RBP14.98□□□□□ -0.01
CDK17-208ENST00000551484 SPDYE4A6NLX3 237 aa14.95□□□□□ -0.02
CDK17-208ENST00000551484 CREBZFQ9NS37 354 aa14.87□□□□□ -0.03
CDK17-208ENST00000551484 STAG3Q9UJ98 1225 aa14.82□□□□□ -0.04
CDK17-208ENST00000551484 ZRANB1Q9UGI0 708 aa14.77□□□□□ -0.05
CDK17-208ENST00000551484 POTEIP0CG38 1075 aa14.75□□□□□ -0.05
CDK17-208ENST00000551484 LHX8Q68G74 356 aa14.73□□□□□ -0.05
CDK17-208ENST00000551484 ZNF579Q8NAF0 562 aaKnown RBP14.67□□□□□ -0.06
CDK17-208ENST00000551484 DCBLD2Q96PD2 775 aa14.64□□□□□ -0.07
CDK17-208ENST00000551484 GALR2O43603 387 aaPredicted RBP14.6□□□□□ -0.07
CDK17-208ENST00000551484 PHF12Q96QT6 1004 aa14.6□□□□□ -0.07
CDK17-208ENST00000551484 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
CDK17-208ENST00000551484 CLCN6P51797 869 aa14.56□□□□□ -0.08
CDK17-208ENST00000551484 MNX1P50219 401 aaPredicted RBP14.55□□□□□ -0.08
CDK17-208ENST00000551484 NPM1P06748 294 aaKnown RBP eCLIP14.53□□□□□ -0.08
CDK17-208ENST00000551484 PROM2Q8N271 834 aa14.46□□□□□ -0.09
CDK17-208ENST00000551484 TSPYL2Q9H2G4 693 aaPredicted RBP14.41□□□□□ -0.1
CDK17-208ENST00000551484 MS4A3Q96HJ5 214 aa14.36□□□□□ -0.11
CDK17-208ENST00000551484 PELP1Q8IZL8 1130 aaKnown RBP14.33□□□□□ -0.12
CDK17-208ENST00000551484 MIER1Q8N108 512 aa14.3□□□□□ -0.12
CDK17-208ENST00000551484 POTEB2H3BUK9 544 aa14.29□□□□□ -0.12
CDK17-208ENST00000551484 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
CDK17-208ENST00000551484 PLEKHG5O94827 1062 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms