RNA–Protein interactions for RNA: ENST00000551434.5

CNOT2-230, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-230ENST00000551434 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
CNOT2-230ENST00000551434 CHIC1Q5VXU3 224 aa16.29■□□□□ 0.2
CNOT2-230ENST00000551434 SENP3Q9H4L4 574 aaPredicted RBP14.49□□□□□ -0.09
CNOT2-230ENST00000551434 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
CNOT2-230ENST00000551434 FOXD1Q16676 465 aa13.4□□□□□ -0.26
CNOT2-230ENST00000551434 PLPPR3Q6T4P5 718 aa13.16□□□□□ -0.3
CNOT2-230ENST00000551434 POTEDQ86YR6 584 aa12.93□□□□□ -0.34
CNOT2-230ENST00000551434 ADRA2BP18089 450 aa12.63□□□□□ -0.39
CNOT2-230ENST00000551434 PPP6R1Q9UPN7 881 aa12.63□□□□□ -0.39
CNOT2-230ENST00000551434 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
CNOT2-230ENST00000551434 MSH5O43196 834 aa12.57□□□□□ -0.4
CNOT2-230ENST00000551434 SCAF1Q9H7N4 1312 aaKnown RBP11.73□□□□□ -0.53
CNOT2-230ENST00000551434 MAPK8IP2Q13387 824 aaPredicted RBP11.52□□□□□ -0.57
CNOT2-230ENST00000551434 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
CNOT2-230ENST00000551434 DMRT2Q9Y5R5 561 aa11.49□□□□□ -0.57
CNOT2-230ENST00000551434 CNKSR2Q8WXI2 1034 aa11.3□□□□□ -0.6
CNOT2-230ENST00000551434 NCBP3Q53F19 620 aaKnown RBP11.24□□□□□ -0.61
CNOT2-230ENST00000551434 HOXD11P31277 338 aaPredicted RBP11.14□□□□□ -0.63
CNOT2-230ENST00000551434 RNF216Q9NWF9 866 aaPredicted RBP11.14□□□□□ -0.63
CNOT2-230ENST00000551434 DCAF8L1A6NGE4 600 aa11.02□□□□□ -0.65
CNOT2-230ENST00000551434 NPM3O75607 178 aaKnown RBP10.95□□□□□ -0.66
CNOT2-230ENST00000551434 KCNA4P22459 653 aa10.89□□□□□ -0.67
CNOT2-230ENST00000551434 DNAJC5BQ9UF47 199 aa10.8□□□□□ -0.68
CNOT2-230ENST00000551434 CACNB1Q02641 598 aaPredicted RBP10.72□□□□□ -0.69
CNOT2-230ENST00000551434 RNF39Q9H2S5 420 aa10.68□□□□□ -0.7
CNOT2-230ENST00000551434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.66□□□□□ -0.72e-6■■□□□ 11.9
CNOT2-230ENST00000551434 C1QBPQ07021 282 aaKnown RBP10.6□□□□□ -0.71
CNOT2-230ENST00000551434 SLC4A1APQ9BWU0 796 aaKnown RBP10.38□□□□□ -0.75
CNOT2-230ENST00000551434 U3KPZ7 1027 aaPredicted RBP10.38□□□□□ -0.75
CNOT2-230ENST00000551434 SLC4A2P04920 1241 aa10.37□□□□□ -0.75
CNOT2-230ENST00000551434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.31□□□□□ -0.76
CNOT2-230ENST00000551434 HNRNPUL2Q1KMD3 747 aaKnown RBP10.31□□□□□ -0.76
CNOT2-230ENST00000551434 APLP2Q06481 763 aa10.3□□□□□ -0.76
CNOT2-230ENST00000551434 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
CNOT2-230ENST00000551434 CAPN15O75808 1086 aa10.21□□□□□ -0.77
CNOT2-230ENST00000551434 MYCNP04198 464 aaPredicted RBP10.19□□□□□ -0.78
CNOT2-230ENST00000551434 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
CNOT2-230ENST00000551434 SPINK5Q9NQ38 1064 aaPredicted RBP10.15□□□□□ -0.78
CNOT2-230ENST00000551434 ZNF219Q9P2Y4 722 aaPredicted RBP10.12□□□□□ -0.79
CNOT2-230ENST00000551434 TRHP20396 242 aaPredicted RBP10.07□□□□□ -0.8
CNOT2-230ENST00000551434 DSG3P32926 999 aa10.06□□□□□ -0.8
CNOT2-230ENST00000551434 POTEHQ6S545 545 aa10□□□□□ -0.81
CNOT2-230ENST00000551434 ZBTB22O15209 634 aa9.95□□□□□ -0.82
CNOT2-230ENST00000551434 ABCB7O75027 752 aa9.92□□□□□ -0.82
CNOT2-230ENST00000551434 ATXN8OSP0DMR3 200 aa9.88□□□□□ -0.83
CNOT2-230ENST00000551434 POLA2Q14181 598 aa9.85□□□□□ -0.83
CNOT2-230ENST00000551434 ATF5Q9Y2D1 282 aaPredicted RBP9.81□□□□□ -0.84
CNOT2-230ENST00000551434 ZBTB12Q9Y330 459 aaPredicted RBP9.75□□□□□ -0.85
CNOT2-230ENST00000551434 CSRNP3Q8WYN3 585 aa9.74□□□□□ -0.85
CNOT2-230ENST00000551434 EHMT2Q96KQ7 1210 aa9.71□□□□□ -0.86
CNOT2-230ENST00000551434 RBM42Q9BTD8 480 aaKnown RBP9.7□□□□□ -0.86
CNOT2-230ENST00000551434 FBLN2P98095 1184 aa9.58□□□□□ -0.88
CNOT2-230ENST00000551434 OSCARQ8IYS5 282 aa9.48□□□□□ -0.89
CNOT2-230ENST00000551434 AKT1S1Q96B36 256 aa9.48□□□□□ -0.89
CNOT2-230ENST00000551434 SPDYE2BA6NHP3 402 aa9.42□□□□□ -0.9
CNOT2-230ENST00000551434 SPDYE6P0CI01 402 aa9.42□□□□□ -0.9
CNOT2-230ENST00000551434 SPDYE2Q495Y8 402 aa9.42□□□□□ -0.9
CNOT2-230ENST00000551434 MKRN4PQ13434 485 aaPredicted RBP9.39□□□□□ -0.91
CNOT2-230ENST00000551434 REM2Q8IYK8 340 aaPredicted RBP9.34□□□□□ -0.91
CNOT2-230ENST00000551434 ZNF692Q9BU19 519 aaPredicted RBP9.34□□□□□ -0.91
CNOT2-230ENST00000551434 CHRDL2Q6WN34 429 aa9.33□□□□□ -0.92
CNOT2-230ENST00000551434 SSUH2Q9Y2M2 353 aa9.26□□□□□ -0.93
CNOT2-230ENST00000551434 SPDYE1Q8NFV5 336 aaPredicted RBP9.22□□□□□ -0.93
CNOT2-230ENST00000551434 PITPNM1O00562 1244 aa9.21□□□□□ -0.94
CNOT2-230ENST00000551434 PABPN1Q86U42 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
CNOT2-230ENST00000551434 CLEC11AQ9Y240 323 aa9.17□□□□□ -0.94
CNOT2-230ENST00000551434 SPDYE4A6NLX3 237 aa9.13□□□□□ -0.95
CNOT2-230ENST00000551434 FXR2P51116 673 aaKnown RBP eCLIP9.12□□□□□ -0.95
CNOT2-230ENST00000551434 PIP4P2Q8N4L2 257 aa9.12□□□□□ -0.95
CNOT2-230ENST00000551434 PRR29P0C7W0 189 aa9.08□□□□□ -0.96
CNOT2-230ENST00000551434 STAG3Q9UJ98 1225 aa9.06□□□□□ -0.96
CNOT2-230ENST00000551434 PRKAR2AP13861 404 aaKnown RBP9.01□□□□□ -0.97
CNOT2-230ENST00000551434 HAX1O00165 279 aa8.96□□□□□ -0.98
CNOT2-230ENST00000551434 SP7Q8TDD2 431 aaPredicted RBP8.96□□□□□ -0.98
CNOT2-230ENST00000551434 CHADLQ6NUI6 762 aa8.9□□□□□ -0.98
CNOT2-230ENST00000551434 PROM2Q8N271 834 aa8.9□□□□□ -0.98
CNOT2-230ENST00000551434 FKBP8Q14318 412 aa8.85□□□□□ -0.99
CNOT2-230ENST00000551434 FARP1Q9Y4F1 1045 aaPredicted RBP8.84□□□□□ -0.99
CNOT2-230ENST00000551434 C19orf67A6NJJ6 358 aa8.81□□□□□ -1
CNOT2-230ENST00000551434 CREBZFQ9NS37 354 aa8.81□□□□□ -1
CNOT2-230ENST00000551434 PLEKHG5O94827 1062 aa8.8□□□□□ -1
CNOT2-230ENST00000551434 NPM1P06748 294 aaKnown RBP eCLIP8.78□□□□□ -1
CNOT2-230ENST00000551434 CD44P16070 742 aaKnown RBP8.74□□□□□ -1.01
CNOT2-230ENST00000551434 EVX2Q03828 476 aa8.74□□□□□ -1.01
CNOT2-230ENST00000551434 CLCN6P51797 869 aa8.72□□□□□ -1.01
CNOT2-230ENST00000551434 MIER1Q8N108 512 aa8.72□□□□□ -1.01
CNOT2-230ENST00000551434 FBXO3Q9UK99 471 aa8.72□□□□□ -1.01
CNOT2-230ENST00000551434 PAK3O75914 559 aaPredicted RBP8.71□□□□□ -1.02
CNOT2-230ENST00000551434 PLSCR2Q9NRY7 297 aa8.69□□□□□ -1.02
CNOT2-230ENST00000551434 PLCD3Q8N3E9 789 aa8.68□□□□□ -1.02
CNOT2-230ENST00000551434 ZBTB47Q9UFB7 747 aaPredicted RBP8.68□□□□□ -1.02
CNOT2-230ENST00000551434 MNX1P50219 401 aaPredicted RBP8.67□□□□□ -1.02
CNOT2-230ENST00000551434 ZRANB1Q9UGI0 708 aa8.66□□□□□ -1.02
CNOT2-230ENST00000551434 GABBR2O75899 941 aa8.64□□□□□ -1.03
CNOT2-230ENST00000551434 ZNF579Q8NAF0 562 aaKnown RBP8.62□□□□□ -1.03
CNOT2-230ENST00000551434 TSPYL2Q9H2G4 693 aaPredicted RBP8.54□□□□□ -1.04
CNOT2-230ENST00000551434 DCBLD2Q96PD2 775 aa8.52□□□□□ -1.05
CNOT2-230ENST00000551434 VASPP50552 380 aaPredicted RBP8.51□□□□□ -1.05
CNOT2-230ENST00000551434 KLHL34Q8N239 644 aa8.49□□□□□ -1.05
CNOT2-230ENST00000551434 PHF12Q96QT6 1004 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms