RNA–Protein interactions for RNA: ENST00000550491.1

GLIPR1-204, Transcript of GLI pathogenesis related 1, humanhuman

TSL 3

Gene GLIPR1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLIPR1-204ENST00000550491 AEBP2Q6ZN18 517 aaPredicted RBP25.59■■□□□ 1.69
GLIPR1-204ENST00000550491 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
GLIPR1-204ENST00000550491 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
GLIPR1-204ENST00000550491 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
GLIPR1-204ENST00000550491 PLPPR3Q6T4P5 718 aa20.6■□□□□ 0.89
GLIPR1-204ENST00000550491 FOXD1Q16676 465 aa20.13■□□□□ 0.81
GLIPR1-204ENST00000550491 ADRA2BP18089 450 aa19.46■□□□□ 0.71
GLIPR1-204ENST00000550491 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
GLIPR1-204ENST00000550491 PIAS4Q8N2W9 510 aaPredicted RBP19.06■□□□□ 0.64
GLIPR1-204ENST00000550491 MSH5O43196 834 aa18.6■□□□□ 0.57
GLIPR1-204ENST00000550491 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
GLIPR1-204ENST00000550491 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
GLIPR1-204ENST00000550491 KCNA4P22459 653 aa17.84■□□□□ 0.45
GLIPR1-204ENST00000550491 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
GLIPR1-204ENST00000550491 CNKSR2Q8WXI2 1034 aa17.62■□□□□ 0.41
GLIPR1-204ENST00000550491 MAPK8IP2Q13387 824 aaPredicted RBP17.58■□□□□ 0.4
GLIPR1-204ENST00000550491 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
GLIPR1-204ENST00000550491 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
GLIPR1-204ENST00000550491 RNF216Q9NWF9 866 aaPredicted RBP17.24■□□□□ 0.35
GLIPR1-204ENST00000550491 HOXD11P31277 338 aaPredicted RBP17.12■□□□□ 0.33
GLIPR1-204ENST00000550491 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
GLIPR1-204ENST00000550491 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
GLIPR1-204ENST00000550491 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
GLIPR1-204ENST00000550491 DCAF8L1A6NGE4 600 aa16.59■□□□□ 0.25
GLIPR1-204ENST00000550491 POTEDQ86YR6 584 aa16.57■□□□□ 0.24
GLIPR1-204ENST00000550491 CSRNP3Q8WYN3 585 aa16.45■□□□□ 0.22
GLIPR1-204ENST00000550491 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
GLIPR1-204ENST00000550491 ZBTB22O15209 634 aa16.39■□□□□ 0.21
GLIPR1-204ENST00000550491 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
GLIPR1-204ENST00000550491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.2
GLIPR1-204ENST00000550491 MYCNP04198 464 aaPredicted RBP16.15■□□□□ 0.18
GLIPR1-204ENST00000550491 U3KPZ7 1027 aaPredicted RBP16.03■□□□□ 0.16
GLIPR1-204ENST00000550491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
GLIPR1-204ENST00000550491 HNRNPUL2Q1KMD3 747 aaKnown RBP15.99■□□□□ 0.15
GLIPR1-204ENST00000550491 ATXN8OSP0DMR3 200 aa15.91■□□□□ 0.14
GLIPR1-204ENST00000550491 SAMD1Q6SPF0 538 aaPredicted RBP15.91■□□□□ 0.14
GLIPR1-204ENST00000550491 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
GLIPR1-204ENST00000550491 APLP2Q06481 763 aa15.81■□□□□ 0.12
GLIPR1-204ENST00000550491 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
GLIPR1-204ENST00000550491 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
GLIPR1-204ENST00000550491 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
GLIPR1-204ENST00000550491 SPINK5Q9NQ38 1064 aaPredicted RBP15.49■□□□□ 0.07
GLIPR1-204ENST00000550491 CAPN15O75808 1086 aa15.46■□□□□ 0.07
GLIPR1-204ENST00000550491 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
GLIPR1-204ENST00000550491 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
GLIPR1-204ENST00000550491 POLA2Q14181 598 aa15.21■□□□□ 0.03
GLIPR1-204ENST00000550491 DSG3P32926 999 aa15.18■□□□□ 0.02
GLIPR1-204ENST00000550491 ABCB7O75027 752 aa15.14■□□□□ 0.01
GLIPR1-204ENST00000550491 ZBTB12Q9Y330 459 aaPredicted RBP15.09■□□□□ 0.01
GLIPR1-204ENST00000550491 FBLN2P98095 1184 aa15.05■□□□□ -0
GLIPR1-204ENST00000550491 MKRN4PQ13434 485 aaPredicted RBP14.95□□□□□ -0.02
GLIPR1-204ENST00000550491 FKBP8Q14318 412 aa14.88□□□□□ -0.03
GLIPR1-204ENST00000550491 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
GLIPR1-204ENST00000550491 OSCARQ8IYS5 282 aa14.69□□□□□ -0.06
GLIPR1-204ENST00000550491 SPDYE2BA6NHP3 402 aa14.65□□□□□ -0.06
GLIPR1-204ENST00000550491 SPDYE6P0CI01 402 aa14.65□□□□□ -0.06
GLIPR1-204ENST00000550491 SPDYE2Q495Y8 402 aa14.65□□□□□ -0.06
GLIPR1-204ENST00000550491 ZNF692Q9BU19 519 aaPredicted RBP14.57□□□□□ -0.08
GLIPR1-204ENST00000550491 PROM2Q8N271 834 aa14.55□□□□□ -0.08
GLIPR1-204ENST00000550491 RBM42Q9BTD8 480 aaKnown RBP14.54□□□□□ -0.08
GLIPR1-204ENST00000550491 SSUH2Q9Y2M2 353 aa14.53□□□□□ -0.08
GLIPR1-204ENST00000550491 FBXO3Q9UK99 471 aa14.41□□□□□ -0.1
GLIPR1-204ENST00000550491 PABPN1Q86U42 306 aaKnown RBP eCLIP14.38□□□□□ -0.11
GLIPR1-204ENST00000550491 AKT1S1Q96B36 256 aa14.37□□□□□ -0.11
GLIPR1-204ENST00000550491 STAG3Q9UJ98 1225 aa14.25□□□□□ -0.13
GLIPR1-204ENST00000550491 REM2Q8IYK8 340 aaPredicted RBP14.18□□□□□ -0.14
GLIPR1-204ENST00000550491 SPDYE1Q8NFV5 336 aaPredicted RBP14.18□□□□□ -0.14
GLIPR1-204ENST00000550491 VASPP50552 380 aaPredicted RBP14.14□□□□□ -0.15
GLIPR1-204ENST00000550491 CLEC11AQ9Y240 323 aa14.04□□□□□ -0.16
GLIPR1-204ENST00000550491 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
GLIPR1-204ENST00000550491 PRR29P0C7W0 189 aa13.97□□□□□ -0.17
GLIPR1-204ENST00000550491 PLCD3Q8N3E9 789 aa13.97□□□□□ -0.17
GLIPR1-204ENST00000550491 PLEKHG5O94827 1062 aa13.96□□□□□ -0.17
GLIPR1-204ENST00000550491 MIER1Q8N108 512 aa13.95□□□□□ -0.18
GLIPR1-204ENST00000550491 IFNLR1Q8IU57 520 aaPredicted RBP13.92□□□□□ -0.18
GLIPR1-204ENST00000550491 AMER1Q5JTC6 1135 aaPredicted RBP13.91□□□□□ -0.18
GLIPR1-204ENST00000550491 ZBTB47Q9UFB7 747 aaPredicted RBP13.89□□□□□ -0.19
GLIPR1-204ENST00000550491 KLHL34Q8N239 644 aa13.85□□□□□ -0.19
GLIPR1-204ENST00000550491 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
GLIPR1-204ENST00000550491 CHRDL2Q6WN34 429 aa13.8□□□□□ -0.2
GLIPR1-204ENST00000550491 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
GLIPR1-204ENST00000550491 RTN4Q9NQC3 1192 aaKnown RBP13.77□□□□□ -0.21
GLIPR1-204ENST00000550491 FXR2P51116 673 aaKnown RBP eCLIP13.74□□□□□ -0.21
GLIPR1-204ENST00000550491 MNX1P50219 401 aaPredicted RBP13.68□□□□□ -0.22
GLIPR1-204ENST00000550491 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
GLIPR1-204ENST00000550491 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
GLIPR1-204ENST00000550491 PIP4P2Q8N4L2 257 aa13.65□□□□□ -0.22
GLIPR1-204ENST00000550491 CHADLQ6NUI6 762 aa13.64□□□□□ -0.23
GLIPR1-204ENST00000550491 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
GLIPR1-204ENST00000550491 NUBP1P53384 320 aa13.58□□□□□ -0.24
GLIPR1-204ENST00000550491 GSE1Q14687 1217 aa13.53□□□□□ -0.24
GLIPR1-204ENST00000550491 PKD2Q13563 968 aa13.52□□□□□ -0.25
GLIPR1-204ENST00000550491 FAM212AQ96EL1 285 aa13.52□□□□□ -0.25
GLIPR1-204ENST00000550491 CIZ1Q9ULV3 898 aaPredicted RBP13.5□□□□□ -0.25
GLIPR1-204ENST00000550491 TRIM41Q8WV44 630 aa13.49□□□□□ -0.25
GLIPR1-204ENST00000550491 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
GLIPR1-204ENST00000550491 RASEFQ8IZ41 740 aa13.46□□□□□ -0.25
GLIPR1-204ENST00000550491 ECM2O94769 699 aaPredicted RBP13.43□□□□□ -0.26
GLIPR1-204ENST00000550491 PAK3O75914 559 aaPredicted RBP13.38□□□□□ -0.27
GLIPR1-204ENST00000550491 TSPYL2Q9H2G4 693 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms