RNA–Protein interactions for RNA: ENST00000550475.2

PRIM2-206, Transcript of DNA primase subunit 2, humanhuman

TSL 5

Gene PRIM2, Length 375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2-206ENST00000550475 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
PRIM2-206ENST00000550475 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
PRIM2-206ENST00000550475 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
PRIM2-206ENST00000550475 PHF23Q9BUL5 403 aaPredicted RBP20.32■□□□□ 0.84
PRIM2-206ENST00000550475 FOXD1Q16676 465 aa19.2■□□□□ 0.66
PRIM2-206ENST00000550475 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
PRIM2-206ENST00000550475 MSH5O43196 834 aa18.07■□□□□ 0.48
PRIM2-206ENST00000550475 PIAS4Q8N2W9 510 aaPredicted RBP17.97■□□□□ 0.47
PRIM2-206ENST00000550475 PPP6R1Q9UPN7 881 aa17.86■□□□□ 0.45
PRIM2-206ENST00000550475 ADRA2BP18089 450 aa17.82■□□□□ 0.44
PRIM2-206ENST00000550475 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
PRIM2-206ENST00000550475 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
PRIM2-206ENST00000550475 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
PRIM2-206ENST00000550475 DMRT2Q9Y5R5 561 aa16.35■□□□□ 0.21
PRIM2-206ENST00000550475 PPP4R3CPQ6ZMV5 832 aa15.96■□□□□ 0.15
PRIM2-206ENST00000550475 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
PRIM2-206ENST00000550475 CNKSR2Q8WXI2 1034 aa15.7■□□□□ 0.1
PRIM2-206ENST00000550475 DCAF8L1A6NGE4 600 aa15.69■□□□□ 0.1
PRIM2-206ENST00000550475 RNF216Q9NWF9 866 aaPredicted RBP15.59■□□□□ 0.09
PRIM2-206ENST00000550475 CACNB1Q02641 598 aaPredicted RBP15.52■□□□□ 0.08
PRIM2-206ENST00000550475 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
PRIM2-206ENST00000550475 RNF39Q9H2S5 420 aa15.38■□□□□ 0.05
PRIM2-206ENST00000550475 DNAJC5BQ9UF47 199 aa15.21■□□□□ 0.03
PRIM2-206ENST00000550475 C1QBPQ07021 282 aaKnown RBP15.17■□□□□ 0.02
PRIM2-206ENST00000550475 NPM3O75607 178 aaKnown RBP15.11■□□□□ 0.01
PRIM2-206ENST00000550475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.01
PRIM2-206ENST00000550475 KCNA4P22459 653 aa14.74□□□□□ -0.05
PRIM2-206ENST00000550475 U3KPZ7 1027 aaPredicted RBP14.64□□□□□ -0.07
PRIM2-206ENST00000550475 CAPN15O75808 1086 aa14.45□□□□□ -0.1
PRIM2-206ENST00000550475 SLC4A2P04920 1241 aa14.43□□□□□ -0.1
PRIM2-206ENST00000550475 SPINK5Q9NQ38 1064 aaPredicted RBP14.43□□□□□ -0.1
PRIM2-206ENST00000550475 DSG3P32926 999 aa14.35□□□□□ -0.11
PRIM2-206ENST00000550475 APLP2Q06481 763 aa14.31□□□□□ -0.12
PRIM2-206ENST00000550475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.26□□□□□ -0.13
PRIM2-206ENST00000550475 HNRNPUL2Q1KMD3 747 aaKnown RBP14.26□□□□□ -0.13
PRIM2-206ENST00000550475 ZNF219Q9P2Y4 722 aaPredicted RBP14.21□□□□□ -0.13
PRIM2-206ENST00000550475 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
PRIM2-206ENST00000550475 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
PRIM2-206ENST00000550475 ABCB7O75027 752 aa14.09□□□□□ -0.15
PRIM2-206ENST00000550475 MYCNP04198 464 aaPredicted RBP14.01□□□□□ -0.17
PRIM2-206ENST00000550475 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
PRIM2-206ENST00000550475 POTEHQ6S545 545 aa13.88□□□□□ -0.19
PRIM2-206ENST00000550475 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
PRIM2-206ENST00000550475 POLA2Q14181 598 aa13.78□□□□□ -0.2
PRIM2-206ENST00000550475 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
PRIM2-206ENST00000550475 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
PRIM2-206ENST00000550475 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
PRIM2-206ENST00000550475 ZBTB22O15209 634 aa13.54□□□□□ -0.24
PRIM2-206ENST00000550475 CHRDL2Q6WN34 429 aa13.46□□□□□ -0.25
PRIM2-206ENST00000550475 ATXN8OSP0DMR3 200 aa13.41□□□□□ -0.26
PRIM2-206ENST00000550475 AKT1S1Q96B36 256 aa13.4□□□□□ -0.26
PRIM2-206ENST00000550475 OSCARQ8IYS5 282 aa13.37□□□□□ -0.27
PRIM2-206ENST00000550475 REM2Q8IYK8 340 aaPredicted RBP13.25□□□□□ -0.29
PRIM2-206ENST00000550475 FBLN2P98095 1184 aa13.19□□□□□ -0.3
PRIM2-206ENST00000550475 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
PRIM2-206ENST00000550475 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
PRIM2-206ENST00000550475 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
PRIM2-206ENST00000550475 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
PRIM2-206ENST00000550475 PIP4P2Q8N4L2 257 aa13.1□□□□□ -0.31
PRIM2-206ENST00000550475 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.33
PRIM2-206ENST00000550475 MKRN4PQ13434 485 aaPredicted RBP13.01□□□□□ -0.33
PRIM2-206ENST00000550475 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
PRIM2-206ENST00000550475 ZNF692Q9BU19 519 aaPredicted RBP12.92□□□□□ -0.34
PRIM2-206ENST00000550475 SPDYE1Q8NFV5 336 aaPredicted RBP12.91□□□□□ -0.34
PRIM2-206ENST00000550475 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
PRIM2-206ENST00000550475 HAX1O00165 279 aa12.89□□□□□ -0.35
PRIM2-206ENST00000550475 CLEC11AQ9Y240 323 aa12.86□□□□□ -0.35
PRIM2-206ENST00000550475 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
PRIM2-206ENST00000550475 PRKAR2AP13861 404 aaKnown RBP12.78□□□□□ -0.36
PRIM2-206ENST00000550475 PABPN1Q86U42 306 aaKnown RBP eCLIP12.73□□□□□ -0.37
PRIM2-206ENST00000550475 EHMT2Q96KQ7 1210 aa12.68□□□□□ -0.38
PRIM2-206ENST00000550475 EVX2Q03828 476 aa12.66□□□□□ -0.38
PRIM2-206ENST00000550475 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
PRIM2-206ENST00000550475 C19orf67A6NJJ6 358 aa12.6□□□□□ -0.39
PRIM2-206ENST00000550475 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
PRIM2-206ENST00000550475 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
PRIM2-206ENST00000550475 GABBR2O75899 941 aa12.42□□□□□ -0.42
PRIM2-206ENST00000550475 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
PRIM2-206ENST00000550475 CD44P16070 742 aaKnown RBP12.39□□□□□ -0.43
PRIM2-206ENST00000550475 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
PRIM2-206ENST00000550475 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
PRIM2-206ENST00000550475 CLCN6P51797 869 aa12.26□□□□□ -0.45
PRIM2-206ENST00000550475 ZNF579Q8NAF0 562 aaKnown RBP12.2□□□□□ -0.46
PRIM2-206ENST00000550475 ZRANB1Q9UGI0 708 aa12.19□□□□□ -0.46
PRIM2-206ENST00000550475 LHX8Q68G74 356 aa12.16□□□□□ -0.46
PRIM2-206ENST00000550475 PAK3O75914 559 aaPredicted RBP12.13□□□□□ -0.47
PRIM2-206ENST00000550475 POTEIP0CG38 1075 aa12.13□□□□□ -0.47
PRIM2-206ENST00000550475 NPM1P06748 294 aaKnown RBP eCLIP12.11□□□□□ -0.47
PRIM2-206ENST00000550475 DCBLD2Q96PD2 775 aa12.11□□□□□ -0.47
PRIM2-206ENST00000550475 PROM2Q8N271 834 aa12.08□□□□□ -0.48
PRIM2-206ENST00000550475 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
PRIM2-206ENST00000550475 GALR2O43603 387 aaPredicted RBP12.02□□□□□ -0.49
PRIM2-206ENST00000550475 PHF12Q96QT6 1004 aa12□□□□□ -0.49
PRIM2-206ENST00000550475 PLEKHG5O94827 1062 aa11.89□□□□□ -0.51
PRIM2-206ENST00000550475 MS4A3Q96HJ5 214 aa11.85□□□□□ -0.51
PRIM2-206ENST00000550475 TSPYL2Q9H2G4 693 aaPredicted RBP11.85□□□□□ -0.51
PRIM2-206ENST00000550475 MIER1Q8N108 512 aa11.83□□□□□ -0.52
PRIM2-206ENST00000550475 CCDC61Q9Y6R9 512 aa11.81□□□□□ -0.52
PRIM2-206ENST00000550475 ASTLQ6HA08 431 aaPredicted RBP11.79□□□□□ -0.52
PRIM2-206ENST00000550475 PELP1Q8IZL8 1130 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms