RNA–Protein interactions for RNA: ENST00000550353.5

ERGIC2-208, Transcript of ERGIC and golgi 2, humanhuman

TSL 5

Gene ERGIC2, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-208ENST00000550353 AEBP2Q6ZN18 517 aaPredicted RBP24.67■■□□□ 1.54
ERGIC2-208ENST00000550353 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
ERGIC2-208ENST00000550353 PHF23Q9BUL5 403 aaPredicted RBP21.2■□□□□ 0.98
ERGIC2-208ENST00000550353 SENP3Q9H4L4 574 aaPredicted RBP20.82■□□□□ 0.92
ERGIC2-208ENST00000550353 PLPPR3Q6T4P5 718 aa19.47■□□□□ 0.71
ERGIC2-208ENST00000550353 FOXD1Q16676 465 aa19.4■□□□□ 0.7
ERGIC2-208ENST00000550353 PPP6R1Q9UPN7 881 aa18.71■□□□□ 0.59
ERGIC2-208ENST00000550353 ADRA2BP18089 450 aa18.67■□□□□ 0.58
ERGIC2-208ENST00000550353 PIAS4Q8N2W9 510 aaPredicted RBP18.26■□□□□ 0.51
ERGIC2-208ENST00000550353 MSH5O43196 834 aa17.8■□□□□ 0.44
ERGIC2-208ENST00000550353 POTEDQ86YR6 584 aa17.56■□□□□ 0.4
ERGIC2-208ENST00000550353 PPP4R3CPQ6ZMV5 832 aa17.19■□□□□ 0.34
ERGIC2-208ENST00000550353 MAPK8IP2Q13387 824 aaPredicted RBP16.96■□□□□ 0.31
ERGIC2-208ENST00000550353 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
ERGIC2-208ENST00000550353 KCNA4P22459 653 aa16.84■□□□□ 0.29
ERGIC2-208ENST00000550353 CNKSR2Q8WXI2 1034 aa16.68■□□□□ 0.26
ERGIC2-208ENST00000550353 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
ERGIC2-208ENST00000550353 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
ERGIC2-208ENST00000550353 NPM3O75607 178 aaKnown RBP16.52■□□□□ 0.24
ERGIC2-208ENST00000550353 RNF216Q9NWF9 866 aaPredicted RBP16.36■□□□□ 0.21
ERGIC2-208ENST00000550353 HOXD11P31277 338 aaPredicted RBP16.31■□□□□ 0.2
ERGIC2-208ENST00000550353 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
ERGIC2-208ENST00000550353 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
ERGIC2-208ENST00000550353 DCAF8L1A6NGE4 600 aa15.91■□□□□ 0.14
ERGIC2-208ENST00000550353 SLC4A2P04920 1241 aa15.63■□□□□ 0.09
ERGIC2-208ENST00000550353 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
ERGIC2-208ENST00000550353 ZBTB22O15209 634 aa15.55■□□□□ 0.08
ERGIC2-208ENST00000550353 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.071e-8■□□□□ 11.3
ERGIC2-208ENST00000550353 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
ERGIC2-208ENST00000550353 CSRNP3Q8WYN3 585 aa15.41■□□□□ 0.06
ERGIC2-208ENST00000550353 U3KPZ7 1027 aaPredicted RBP15.33■□□□□ 0.04
ERGIC2-208ENST00000550353 RNF39Q9H2S5 420 aa15.31■□□□□ 0.04
ERGIC2-208ENST00000550353 MYCNP04198 464 aaPredicted RBP15.21■□□□□ 0.03
ERGIC2-208ENST00000550353 C1QBPQ07021 282 aaKnown RBP15.07■□□□□ 0
ERGIC2-208ENST00000550353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
ERGIC2-208ENST00000550353 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
ERGIC2-208ENST00000550353 SAMD1Q6SPF0 538 aaPredicted RBP14.98□□□□□ -0.01
ERGIC2-208ENST00000550353 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
ERGIC2-208ENST00000550353 ATF5Q9Y2D1 282 aaPredicted RBP14.91□□□□□ -0.02
ERGIC2-208ENST00000550353 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
ERGIC2-208ENST00000550353 ATXN8OSP0DMR3 200 aa14.86□□□□□ -0.03
ERGIC2-208ENST00000550353 APLP2Q06481 763 aa14.82□□□□□ -0.04
ERGIC2-208ENST00000550353 CAPN15O75808 1086 aa14.78□□□□□ -0.04
ERGIC2-208ENST00000550353 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
ERGIC2-208ENST00000550353 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
ERGIC2-208ENST00000550353 DSG3P32926 999 aa14.58□□□□□ -0.08
ERGIC2-208ENST00000550353 ABCB7O75027 752 aa14.56□□□□□ -0.08
ERGIC2-208ENST00000550353 POLA2Q14181 598 aa14.5□□□□□ -0.09
ERGIC2-208ENST00000550353 MKRN4PQ13434 485 aaPredicted RBP14.25□□□□□ -0.13
ERGIC2-208ENST00000550353 ZBTB12Q9Y330 459 aaPredicted RBP14.17□□□□□ -0.14
ERGIC2-208ENST00000550353 FBLN2P98095 1184 aa14.14□□□□□ -0.15
ERGIC2-208ENST00000550353 OSCARQ8IYS5 282 aa14.03□□□□□ -0.16
ERGIC2-208ENST00000550353 FKBP8Q14318 412 aa13.89□□□□□ -0.19
ERGIC2-208ENST00000550353 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
ERGIC2-208ENST00000550353 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
ERGIC2-208ENST00000550353 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
ERGIC2-208ENST00000550353 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
ERGIC2-208ENST00000550353 RBM42Q9BTD8 480 aaKnown RBP13.8□□□□□ -0.2
ERGIC2-208ENST00000550353 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
ERGIC2-208ENST00000550353 SSUH2Q9Y2M2 353 aa13.77□□□□□ -0.21
ERGIC2-208ENST00000550353 PROM2Q8N271 834 aa13.66□□□□□ -0.22
ERGIC2-208ENST00000550353 AKT1S1Q96B36 256 aa13.66□□□□□ -0.22
ERGIC2-208ENST00000550353 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
ERGIC2-208ENST00000550353 REM2Q8IYK8 340 aaPredicted RBP13.57□□□□□ -0.24
ERGIC2-208ENST00000550353 POTEHQ6S545 545 aa13.48□□□□□ -0.25
ERGIC2-208ENST00000550353 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
ERGIC2-208ENST00000550353 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
ERGIC2-208ENST00000550353 CLEC11AQ9Y240 323 aa13.39□□□□□ -0.27
ERGIC2-208ENST00000550353 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
ERGIC2-208ENST00000550353 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
ERGIC2-208ENST00000550353 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
ERGIC2-208ENST00000550353 PRR29P0C7W0 189 aa13.24□□□□□ -0.29
ERGIC2-208ENST00000550353 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.29
ERGIC2-208ENST00000550353 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
ERGIC2-208ENST00000550353 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
ERGIC2-208ENST00000550353 CREBZFQ9NS37 354 aa13.14□□□□□ -0.31
ERGIC2-208ENST00000550353 CHADLQ6NUI6 762 aa13.12□□□□□ -0.31
ERGIC2-208ENST00000550353 MIER1Q8N108 512 aa13.12□□□□□ -0.31
ERGIC2-208ENST00000550353 PLCD3Q8N3E9 789 aa13.09□□□□□ -0.31
ERGIC2-208ENST00000550353 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
ERGIC2-208ENST00000550353 IFNLR1Q8IU57 520 aaPredicted RBP13.07□□□□□ -0.32
ERGIC2-208ENST00000550353 MNX1P50219 401 aaPredicted RBP13.03□□□□□ -0.32
ERGIC2-208ENST00000550353 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
ERGIC2-208ENST00000550353 FARP1Q9Y4F1 1045 aaPredicted RBP12.95□□□□□ -0.34
ERGIC2-208ENST00000550353 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
ERGIC2-208ENST00000550353 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
ERGIC2-208ENST00000550353 SPOCK2Q92563 424 aa12.84□□□□□ -0.35
ERGIC2-208ENST00000550353 NUBP1P53384 320 aa12.83□□□□□ -0.36
ERGIC2-208ENST00000550353 NPM1P06748 294 aaKnown RBP eCLIP12.82□□□□□ -0.36
ERGIC2-208ENST00000550353 RASEFQ8IZ41 740 aa12.8□□□□□ -0.36
ERGIC2-208ENST00000550353 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
ERGIC2-208ENST00000550353 CD44P16070 742 aaKnown RBP12.69□□□□□ -0.38
ERGIC2-208ENST00000550353 TSPYL2Q9H2G4 693 aaPredicted RBP12.69□□□□□ -0.38
ERGIC2-208ENST00000550353 HAX1O00165 279 aa12.68□□□□□ -0.38
ERGIC2-208ENST00000550353 EVX2Q03828 476 aa12.67□□□□□ -0.38
ERGIC2-208ENST00000550353 FAM212AQ96EL1 285 aa12.67□□□□□ -0.38
ERGIC2-208ENST00000550353 RTN4Q9NQC3 1192 aaKnown RBP12.67□□□□□ -0.38
ERGIC2-208ENST00000550353 DCAF8Q5TAQ9 597 aa12.65□□□□□ -0.38
ERGIC2-208ENST00000550353 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
ERGIC2-208ENST00000550353 PKD2Q13563 968 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms