RNA–Protein interactions for RNA: ENST00000550304.1

LRIG3-206, Transcript of leucine rich repeats and immunoglobulin like domains 3, humanhuman

TSL 5

Gene LRIG3, Length 249 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3-206ENST00000550304 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
LRIG3-206ENST00000550304 AEBP2Q6ZN18 517 aaPredicted RBP25.96■■□□□ 1.75
LRIG3-206ENST00000550304 PHF23Q9BUL5 403 aaPredicted RBP23.05■■□□□ 1.28
LRIG3-206ENST00000550304 SENP3Q9H4L4 574 aaPredicted RBP21.99■■□□□ 1.11
LRIG3-206ENST00000550304 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
LRIG3-206ENST00000550304 FOXD1Q16676 465 aa20.29■□□□□ 0.84
LRIG3-206ENST00000550304 ADRA2BP18089 450 aa20.2■□□□□ 0.82
LRIG3-206ENST00000550304 KCNA4P22459 653 aa20.02■□□□□ 0.8
LRIG3-206ENST00000550304 PPP6R1Q9UPN7 881 aa19.96■□□□□ 0.79
LRIG3-206ENST00000550304 EHMT2Q96KQ7 1210 aa19.92■□□□□ 0.78
LRIG3-206ENST00000550304 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
LRIG3-206ENST00000550304 PIAS4Q8N2W9 510 aaPredicted RBP19.28■□□□□ 0.68
LRIG3-206ENST00000550304 PPP4R3CPQ6ZMV5 832 aa19.26■□□□□ 0.67
LRIG3-206ENST00000550304 CSRNP3Q8WYN3 585 aa19.25■□□□□ 0.67
LRIG3-206ENST00000550304 NCBP3Q53F19 620 aaKnown RBP19.16■□□□□ 0.66
LRIG3-206ENST00000550304 NPM3O75607 178 aaKnown RBP18.79■□□□□ 0.6
LRIG3-206ENST00000550304 MSH5O43196 834 aa18.54■□□□□ 0.56
LRIG3-206ENST00000550304 CNKSR2Q8WXI2 1034 aa18.53■□□□□ 0.56
LRIG3-206ENST00000550304 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
LRIG3-206ENST00000550304 ZBTB22O15209 634 aa18.4■□□□□ 0.54
LRIG3-206ENST00000550304 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
LRIG3-206ENST00000550304 FOXD4L1Q9NU39 408 aa18.18■□□□□ 0.5
LRIG3-206ENST00000550304 MAPK8IP2Q13387 824 aaPredicted RBP17.92■□□□□ 0.46
LRIG3-206ENST00000550304 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
LRIG3-206ENST00000550304 SLC24A1O60721 1099 aa17.82■□□□□ 0.44
LRIG3-206ENST00000550304 AMER1Q5JTC6 1135 aaPredicted RBP17.8■□□□□ 0.44
LRIG3-206ENST00000550304 RTN4Q9NQC3 1192 aaKnown RBP17.68■□□□□ 0.42
LRIG3-206ENST00000550304 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
LRIG3-206ENST00000550304 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
LRIG3-206ENST00000550304 ATXN8OSP0DMR3 200 aa17.52■□□□□ 0.4
LRIG3-206ENST00000550304 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
LRIG3-206ENST00000550304 MYCNP04198 464 aaPredicted RBP17.39■□□□□ 0.37
LRIG3-206ENST00000550304 FKBP8Q14318 412 aa17.32■□□□□ 0.36
LRIG3-206ENST00000550304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
LRIG3-206ENST00000550304 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
LRIG3-206ENST00000550304 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
LRIG3-206ENST00000550304 DCAF8L1A6NGE4 600 aa16.75■□□□□ 0.27
LRIG3-206ENST00000550304 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
LRIG3-206ENST00000550304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.26
LRIG3-206ENST00000550304 FBXO3Q9UK99 471 aa16.53■□□□□ 0.24
LRIG3-206ENST00000550304 U3KPZ7 1027 aaPredicted RBP16.5■□□□□ 0.23
LRIG3-206ENST00000550304 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
LRIG3-206ENST00000550304 APLP2Q06481 763 aa16.38■□□□□ 0.21
LRIG3-206ENST00000550304 PLCB2Q00722 1185 aa16.35■□□□□ 0.21
LRIG3-206ENST00000550304 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
LRIG3-206ENST00000550304 PROM2Q8N271 834 aa16.24■□□□□ 0.19
LRIG3-206ENST00000550304 VASPP50552 380 aaPredicted RBP16.19■□□□□ 0.18
LRIG3-206ENST00000550304 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
LRIG3-206ENST00000550304 FBLN2P98095 1184 aa16.08■□□□□ 0.16
LRIG3-206ENST00000550304 HAP1P54257 671 aaPredicted RBP16.07■□□□□ 0.16
LRIG3-206ENST00000550304 IFNLR1Q8IU57 520 aaPredicted RBP16.03■□□□□ 0.16
LRIG3-206ENST00000550304 BCANQ96GW7 911 aa16■□□□□ 0.15
LRIG3-206ENST00000550304 DCAF8L2P0C7V8 631 aa15.99■□□□□ 0.15
LRIG3-206ENST00000550304 VSIG10Q8N0Z9 540 aa15.96■□□□□ 0.15
LRIG3-206ENST00000550304 PKD2Q13563 968 aa15.92■□□□□ 0.14
LRIG3-206ENST00000550304 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
LRIG3-206ENST00000550304 POTEDQ86YR6 584 aa15.82■□□□□ 0.12
LRIG3-206ENST00000550304 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
LRIG3-206ENST00000550304 POLA2Q14181 598 aa15.79■□□□□ 0.12
LRIG3-206ENST00000550304 SPINK5Q9NQ38 1064 aaPredicted RBP15.79■□□□□ 0.12
LRIG3-206ENST00000550304 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.78■□□□□ 0.12
LRIG3-206ENST00000550304 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
LRIG3-206ENST00000550304 BBXQ8WY36 941 aaPredicted RBP15.76■□□□□ 0.11
LRIG3-206ENST00000550304 TAOK2Q9UL54 1235 aa15.74■□□□□ 0.11
LRIG3-206ENST00000550304 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
LRIG3-206ENST00000550304 SPOCK2Q92563 424 aa15.72■□□□□ 0.11
LRIG3-206ENST00000550304 CAPN15O75808 1086 aa15.7■□□□□ 0.1
LRIG3-206ENST00000550304 KLHL34Q8N239 644 aa15.66■□□□□ 0.1
LRIG3-206ENST00000550304 PRKCSHP14314 528 aaPredicted RBP15.65■□□□□ 0.1
LRIG3-206ENST00000550304 ECM2O94769 699 aaPredicted RBP15.64■□□□□ 0.09
LRIG3-206ENST00000550304 STAG3Q9UJ98 1225 aa15.61■□□□□ 0.09
LRIG3-206ENST00000550304 PAXIP1Q6ZW49 1069 aaPredicted RBP15.57■□□□□ 0.08
LRIG3-206ENST00000550304 KDM2AQ9Y2K7 1162 aa15.57■□□□□ 0.08
LRIG3-206ENST00000550304 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
LRIG3-206ENST00000550304 CFAP44Q96MT7 982 aa15.52■□□□□ 0.08
LRIG3-206ENST00000550304 SPRYD3Q8NCJ5 442 aa15.47■□□□□ 0.07
LRIG3-206ENST00000550304 TPRNQ4KMQ1 711 aa15.46■□□□□ 0.07
LRIG3-206ENST00000550304 PLCD3Q8N3E9 789 aa15.44■□□□□ 0.06
LRIG3-206ENST00000550304 ABCB7O75027 752 aa15.43■□□□□ 0.06
LRIG3-206ENST00000550304 ZNF692Q9BU19 519 aaPredicted RBP15.43■□□□□ 0.06
LRIG3-206ENST00000550304 RGL2O15211 777 aa15.41■□□□□ 0.06
LRIG3-206ENST00000550304 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
LRIG3-206ENST00000550304 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
LRIG3-206ENST00000550304 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
LRIG3-206ENST00000550304 DSG3P32926 999 aa15.34■□□□□ 0.05
LRIG3-206ENST00000550304 MIER1Q8N108 512 aa15.34■□□□□ 0.05
LRIG3-206ENST00000550304 SSUH2Q9Y2M2 353 aa15.33■□□□□ 0.04
LRIG3-206ENST00000550304 TSHZ2Q9NRE2 1034 aa15.32■□□□□ 0.04
LRIG3-206ENST00000550304 ZBTB47Q9UFB7 747 aaPredicted RBP15.3■□□□□ 0.04
LRIG3-206ENST00000550304 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
LRIG3-206ENST00000550304 PLEKHG5O94827 1062 aa15.26■□□□□ 0.03
LRIG3-206ENST00000550304 CHGAP10645 457 aaKnown RBP15.26■□□□□ 0.03
LRIG3-206ENST00000550304 PABPN1Q86U42 306 aaKnown RBP eCLIP15.23■□□□□ 0.03
LRIG3-206ENST00000550304 CIZ1Q9ULV3 898 aaPredicted RBP15.23■□□□□ 0.03
LRIG3-206ENST00000550304 DNAJC5Q9H3Z4 198 aa15.22■□□□□ 0.03
LRIG3-206ENST00000550304 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
LRIG3-206ENST00000550304 NBR1Q14596 966 aa15.16■□□□□ 0.02
LRIG3-206ENST00000550304 HS6ST3Q8IZP7 471 aa15.14■□□□□ 0.01
LRIG3-206ENST00000550304 CACNB1Q02641 598 aaPredicted RBP15.05■□□□□ -0
LRIG3-206ENST00000550304 GSE1Q14687 1217 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms