RNA–Protein interactions for RNA: ENST00000549899.1

CDK17-206, Transcript of cyclin dependent kinase 17, humanhuman

TSL 5

Gene CDK17, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-206ENST00000549899 AEBP2Q6ZN18 517 aaPredicted RBP30.55■■■□□ 2.48
CDK17-206ENST00000549899 CHIC1Q5VXU3 224 aa28.49■■■□□ 2.15
CDK17-206ENST00000549899 SENP3Q9H4L4 574 aaPredicted RBP26.11■■□□□ 1.77
CDK17-206ENST00000549899 PHF23Q9BUL5 403 aaPredicted RBP25.7■■□□□ 1.7
CDK17-206ENST00000549899 FOXD1Q16676 465 aa24.42■■□□□ 1.5
CDK17-206ENST00000549899 POTEDQ86YR6 584 aa23.41■■□□□ 1.34
CDK17-206ENST00000549899 MSH5O43196 834 aa23.03■■□□□ 1.28
CDK17-206ENST00000549899 PIAS4Q8N2W9 510 aaPredicted RBP22.67■■□□□ 1.22
CDK17-206ENST00000549899 PLPPR3Q6T4P5 718 aa22.48■■□□□ 1.19
CDK17-206ENST00000549899 PPP6R1Q9UPN7 881 aa22.43■■□□□ 1.18
CDK17-206ENST00000549899 ADRA2BP18089 450 aa22.32■■□□□ 1.16
CDK17-206ENST00000549899 MAPK8IP2Q13387 824 aaPredicted RBP20.67■□□□□ 0.9
CDK17-206ENST00000549899 DMRT2Q9Y5R5 561 aa20.63■□□□□ 0.89
CDK17-206ENST00000549899 SCAF1Q9H7N4 1312 aaKnown RBP20.38■□□□□ 0.85
CDK17-206ENST00000549899 CACNB1Q02641 598 aaPredicted RBP20.09■□□□□ 0.81
CDK17-206ENST00000549899 DCAF8L1A6NGE4 600 aa19.79■□□□□ 0.76
CDK17-206ENST00000549899 HOXD11P31277 338 aaPredicted RBP19.66■□□□□ 0.74
CDK17-206ENST00000549899 PPP4R3CPQ6ZMV5 832 aa19.65■□□□□ 0.74
CDK17-206ENST00000549899 RNF39Q9H2S5 420 aa19.63■□□□□ 0.73
CDK17-206ENST00000549899 CNKSR2Q8WXI2 1034 aa19.39■□□□□ 0.69
CDK17-206ENST00000549899 RNF216Q9NWF9 866 aaPredicted RBP19.37■□□□□ 0.69
CDK17-206ENST00000549899 C1QBPQ07021 282 aaKnown RBP19.28■□□□□ 0.68
CDK17-206ENST00000549899 DNAJC5BQ9UF47 199 aa19.07■□□□□ 0.64
CDK17-206ENST00000549899 NCBP3Q53F19 620 aaKnown RBP19■□□□□ 0.63
CDK17-206ENST00000549899 KCNA4P22459 653 aa18.72■□□□□ 0.59
CDK17-206ENST00000549899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.71■□□□□ 0.59
CDK17-206ENST00000549899 NPM3O75607 178 aaKnown RBP18.65■□□□□ 0.58
CDK17-206ENST00000549899 U3KPZ7 1027 aaPredicted RBP18.29■□□□□ 0.52
CDK17-206ENST00000549899 POTEHQ6S545 545 aa18.22■□□□□ 0.51
CDK17-206ENST00000549899 DSG3P32926 999 aa18.19■□□□□ 0.5
CDK17-206ENST00000549899 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
CDK17-206ENST00000549899 CAPN15O75808 1086 aa18.15■□□□□ 0.5
CDK17-206ENST00000549899 SLC4A1APQ9BWU0 796 aaKnown RBP17.81■□□□□ 0.44
CDK17-206ENST00000549899 SLC4A2P04920 1241 aa17.8■□□□□ 0.44
CDK17-206ENST00000549899 TRHP20396 242 aaPredicted RBP17.74■□□□□ 0.43
CDK17-206ENST00000549899 ABCB7O75027 752 aa17.7■□□□□ 0.42
CDK17-206ENST00000549899 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
CDK17-206ENST00000549899 APLP2Q06481 763 aa17.67■□□□□ 0.42
CDK17-206ENST00000549899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
CDK17-206ENST00000549899 HNRNPUL2Q1KMD3 747 aaKnown RBP17.54■□□□□ 0.4
CDK17-206ENST00000549899 SAMD1Q6SPF0 538 aaPredicted RBP17.43■□□□□ 0.38
CDK17-206ENST00000549899 RBM42Q9BTD8 480 aaKnown RBP17.35■□□□□ 0.37
CDK17-206ENST00000549899 FOXD4L1Q9NU39 408 aa17.35■□□□□ 0.37
CDK17-206ENST00000549899 MYCNP04198 464 aaPredicted RBP17.28■□□□□ 0.36
CDK17-206ENST00000549899 ZBTB22O15209 634 aa17.2■□□□□ 0.34
CDK17-206ENST00000549899 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
CDK17-206ENST00000549899 POLA2Q14181 598 aa17.14■□□□□ 0.33
CDK17-206ENST00000549899 EHMT2Q96KQ7 1210 aa16.93■□□□□ 0.3
CDK17-206ENST00000549899 CSRNP3Q8WYN3 585 aa16.85■□□□□ 0.29
CDK17-206ENST00000549899 AKT1S1Q96B36 256 aa16.85■□□□□ 0.29
CDK17-206ENST00000549899 SP7Q8TDD2 431 aaPredicted RBP16.83■□□□□ 0.28
CDK17-206ENST00000549899 ATXN8OSP0DMR3 200 aa16.78■□□□□ 0.28
CDK17-206ENST00000549899 ATF5Q9Y2D1 282 aaPredicted RBP16.78■□□□□ 0.28
CDK17-206ENST00000549899 ZBTB12Q9Y330 459 aaPredicted RBP16.74■□□□□ 0.27
CDK17-206ENST00000549899 REM2Q8IYK8 340 aaPredicted RBP16.7■□□□□ 0.26
CDK17-206ENST00000549899 PIP4P2Q8N4L2 257 aa16.69■□□□□ 0.26
CDK17-206ENST00000549899 OSCARQ8IYS5 282 aa16.63■□□□□ 0.25
CDK17-206ENST00000549899 PITPNM1O00562 1244 aa16.54■□□□□ 0.24
CDK17-206ENST00000549899 HAX1O00165 279 aa16.51■□□□□ 0.23
CDK17-206ENST00000549899 FXR2P51116 673 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDK17-206ENST00000549899 EVX2Q03828 476 aa16.3■□□□□ 0.2
CDK17-206ENST00000549899 SPDYE2BA6NHP3 402 aa16.19■□□□□ 0.18
CDK17-206ENST00000549899 SPDYE6P0CI01 402 aa16.19■□□□□ 0.18
CDK17-206ENST00000549899 SPDYE2Q495Y8 402 aa16.19■□□□□ 0.18
CDK17-206ENST00000549899 FBLN2P98095 1184 aa16.18■□□□□ 0.18
CDK17-206ENST00000549899 PRKAR2AP13861 404 aaKnown RBP16.09■□□□□ 0.17
CDK17-206ENST00000549899 MKRN4PQ13434 485 aaPredicted RBP16.04■□□□□ 0.16
CDK17-206ENST00000549899 SPDYE1Q8NFV5 336 aaPredicted RBP16.03■□□□□ 0.16
CDK17-206ENST00000549899 CLEC11AQ9Y240 323 aa16.03■□□□□ 0.16
CDK17-206ENST00000549899 C19orf67A6NJJ6 358 aa15.99■□□□□ 0.15
CDK17-206ENST00000549899 SSUH2Q9Y2M2 353 aa15.93■□□□□ 0.14
CDK17-206ENST00000549899 ZNF692Q9BU19 519 aaPredicted RBP15.9■□□□□ 0.14
CDK17-206ENST00000549899 GABBR2O75899 941 aa15.88■□□□□ 0.13
CDK17-206ENST00000549899 CHADLQ6NUI6 762 aa15.8■□□□□ 0.12
CDK17-206ENST00000549899 LHX8Q68G74 356 aa15.78■□□□□ 0.12
CDK17-206ENST00000549899 PRR29P0C7W0 189 aa15.69■□□□□ 0.1
CDK17-206ENST00000549899 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
CDK17-206ENST00000549899 SPDYE4A6NLX3 237 aa15.58■□□□□ 0.08
CDK17-206ENST00000549899 POTEIP0CG38 1075 aa15.56■□□□□ 0.08
CDK17-206ENST00000549899 CD44P16070 742 aaKnown RBP15.55■□□□□ 0.08
CDK17-206ENST00000549899 FARP1Q9Y4F1 1045 aaPredicted RBP15.51■□□□□ 0.07
CDK17-206ENST00000549899 CLCN6P51797 869 aa15.41■□□□□ 0.06
CDK17-206ENST00000549899 DCBLD2Q96PD2 775 aa15.32■□□□□ 0.04
CDK17-206ENST00000549899 FKBP8Q14318 412 aa15.29■□□□□ 0.04
CDK17-206ENST00000549899 ZNF579Q8NAF0 562 aaKnown RBP15.29■□□□□ 0.04
CDK17-206ENST00000549899 STAG3Q9UJ98 1225 aa15.27■□□□□ 0.04
CDK17-206ENST00000549899 ZRANB1Q9UGI0 708 aa15.24■□□□□ 0.03
CDK17-206ENST00000549899 PROM2Q8N271 834 aa15.23■□□□□ 0.03
CDK17-206ENST00000549899 PLSCR2Q9NRY7 297 aa15.2■□□□□ 0.02
CDK17-206ENST00000549899 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
CDK17-206ENST00000549899 GALR2O43603 387 aaPredicted RBP15.15■□□□□ 0.02
CDK17-206ENST00000549899 OTUD5Q96G74 571 aa15.08■□□□□ 0
CDK17-206ENST00000549899 POTEB2H3BUK9 544 aa15.04■□□□□ -0
CDK17-206ENST00000549899 PHF12Q96QT6 1004 aa15.02■□□□□ -0
CDK17-206ENST00000549899 PAK3O75914 559 aaPredicted RBP14.98□□□□□ -0.01
CDK17-206ENST00000549899 PELP1Q8IZL8 1130 aaKnown RBP14.92□□□□□ -0.02
CDK17-206ENST00000549899 POTEMA6NI47 508 aa14.89□□□□□ -0.03
CDK17-206ENST00000549899 MNX1P50219 401 aaPredicted RBP14.89□□□□□ -0.03
CDK17-206ENST00000549899 NPM1P06748 294 aaKnown RBP eCLIP14.87□□□□□ -0.03
CDK17-206ENST00000549899 FBXO3Q9UK99 471 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms