RNA–Protein interactions for RNA: ENST00000549705.1

CNOT2-218, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-218ENST00000549705 AEBP2Q6ZN18 517 aaPredicted RBP32.64■■■□□ 2.82
CNOT2-218ENST00000549705 CHIC1Q5VXU3 224 aa31.07■■■□□ 2.56
CNOT2-218ENST00000549705 SENP3Q9H4L4 574 aaPredicted RBP27.8■■■□□ 2.04
CNOT2-218ENST00000549705 PHF23Q9BUL5 403 aaPredicted RBP27.45■■□□□ 1.98
CNOT2-218ENST00000549705 FOXD1Q16676 465 aa25.91■■□□□ 1.74
CNOT2-218ENST00000549705 PLPPR3Q6T4P5 718 aa24.84■■□□□ 1.57
CNOT2-218ENST00000549705 PPP6R1Q9UPN7 881 aa24.3■■□□□ 1.48
CNOT2-218ENST00000549705 PIAS4Q8N2W9 510 aaPredicted RBP24.22■■□□□ 1.47
CNOT2-218ENST00000549705 ADRA2BP18089 450 aa24.21■■□□□ 1.47
CNOT2-218ENST00000549705 MSH5O43196 834 aa24.2■■□□□ 1.46
CNOT2-218ENST00000549705 POTEDQ86YR6 584 aa23.48■■□□□ 1.35
CNOT2-218ENST00000549705 MAPK8IP2Q13387 824 aaPredicted RBP22.21■■□□□ 1.15
CNOT2-218ENST00000549705 SCAF1Q9H7N4 1312 aaKnown RBP22.11■■□□□ 1.13
CNOT2-218ENST00000549705 DMRT2Q9Y5R5 561 aa22.07■■□□□ 1.12
CNOT2-218ENST00000549705 PPP4R3CPQ6ZMV5 832 aa21.79■■□□□ 1.08
CNOT2-218ENST00000549705 CNKSR2Q8WXI2 1034 aa21.36■■□□□ 1.01
CNOT2-218ENST00000549705 HOXD11P31277 338 aaPredicted RBP21.3■■□□□ 1
CNOT2-218ENST00000549705 RNF216Q9NWF9 866 aaPredicted RBP21.15■□□□□ 0.98
CNOT2-218ENST00000549705 DCAF8L1A6NGE4 600 aa21.09■□□□□ 0.97
CNOT2-218ENST00000549705 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
CNOT2-218ENST00000549705 NPM3O75607 178 aaKnown RBP20.7■□□□□ 0.9
CNOT2-218ENST00000549705 CACNB1Q02641 598 aaPredicted RBP20.68■□□□□ 0.9
CNOT2-218ENST00000549705 RNF39Q9H2S5 420 aa20.68■□□□□ 0.9
CNOT2-218ENST00000549705 DNAJC5BQ9UF47 199 aa20.56■□□□□ 0.88
CNOT2-218ENST00000549705 KCNA4P22459 653 aa20.38■□□□□ 0.85
CNOT2-218ENST00000549705 C1QBPQ07021 282 aaKnown RBP20.37■□□□□ 0.85
CNOT2-218ENST00000549705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.83
CNOT2-218ENST00000549705 U3KPZ7 1027 aaPredicted RBP19.88■□□□□ 0.77
CNOT2-218ENST00000549705 SLC4A2P04920 1241 aa19.76■□□□□ 0.75
CNOT2-218ENST00000549705 SPINK5Q9NQ38 1064 aaPredicted RBP19.55■□□□□ 0.72
CNOT2-218ENST00000549705 CAPN15O75808 1086 aa19.48■□□□□ 0.71
CNOT2-218ENST00000549705 DSG3P32926 999 aa19.39■□□□□ 0.69
CNOT2-218ENST00000549705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.31■□□□□ 0.68
CNOT2-218ENST00000549705 HNRNPUL2Q1KMD3 747 aaKnown RBP19.31■□□□□ 0.68
CNOT2-218ENST00000549705 APLP2Q06481 763 aa19.28■□□□□ 0.68
CNOT2-218ENST00000549705 SLC4A1APQ9BWU0 796 aaKnown RBP19.23■□□□□ 0.67
CNOT2-218ENST00000549705 SAMD1Q6SPF0 538 aaPredicted RBP19.21■□□□□ 0.67
CNOT2-218ENST00000549705 TRHP20396 242 aaPredicted RBP19.19■□□□□ 0.66
CNOT2-218ENST00000549705 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
CNOT2-218ENST00000549705 MYCNP04198 464 aaPredicted RBP19.13■□□□□ 0.65
CNOT2-218ENST00000549705 ABCB7O75027 752 aa19.05■□□□□ 0.64
CNOT2-218ENST00000549705 FOXD4L1Q9NU39 408 aa18.99■□□□□ 0.63
CNOT2-218ENST00000549705 ZBTB22O15209 634 aa18.76■□□□□ 0.59
CNOT2-218ENST00000549705 POLA2Q14181 598 aa18.7■□□□□ 0.58
CNOT2-218ENST00000549705 ATF5Q9Y2D1 282 aaPredicted RBP18.7■□□□□ 0.58
CNOT2-218ENST00000549705 RBM42Q9BTD8 480 aaKnown RBP18.47■□□□□ 0.55
CNOT2-218ENST00000549705 POTEHQ6S545 545 aa18.41■□□□□ 0.54
CNOT2-218ENST00000549705 ATXN8OSP0DMR3 200 aa18.39■□□□□ 0.53
CNOT2-218ENST00000549705 ZBTB12Q9Y330 459 aaPredicted RBP18.34■□□□□ 0.53
CNOT2-218ENST00000549705 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
CNOT2-218ENST00000549705 AKT1S1Q96B36 256 aa18.08■□□□□ 0.48
CNOT2-218ENST00000549705 CHRDL2Q6WN34 429 aa18.04■□□□□ 0.48
CNOT2-218ENST00000549705 CSRNP3Q8WYN3 585 aa17.96■□□□□ 0.47
CNOT2-218ENST00000549705 FBLN2P98095 1184 aa17.91■□□□□ 0.46
CNOT2-218ENST00000549705 REM2Q8IYK8 340 aaPredicted RBP17.91■□□□□ 0.46
CNOT2-218ENST00000549705 MKRN4PQ13434 485 aaPredicted RBP17.85■□□□□ 0.45
CNOT2-218ENST00000549705 SPDYE2BA6NHP3 402 aa17.79■□□□□ 0.44
CNOT2-218ENST00000549705 SPDYE6P0CI01 402 aa17.79■□□□□ 0.44
CNOT2-218ENST00000549705 SPDYE2Q495Y8 402 aa17.79■□□□□ 0.44
CNOT2-218ENST00000549705 EHMT2Q96KQ7 1210 aa17.74■□□□□ 0.43
CNOT2-218ENST00000549705 PITPNM1O00562 1244 aa17.72■□□□□ 0.43
CNOT2-218ENST00000549705 PIP4P2Q8N4L2 257 aa17.64■□□□□ 0.41
CNOT2-218ENST00000549705 SSUH2Q9Y2M2 353 aa17.6■□□□□ 0.41
CNOT2-218ENST00000549705 ZNF692Q9BU19 519 aaPredicted RBP17.57■□□□□ 0.4
CNOT2-218ENST00000549705 FXR2P51116 673 aaKnown RBP eCLIP17.56■□□□□ 0.4
CNOT2-218ENST00000549705 SPDYE1Q8NFV5 336 aaPredicted RBP17.45■□□□□ 0.38
CNOT2-218ENST00000549705 CLEC11AQ9Y240 323 aa17.39■□□□□ 0.37
CNOT2-218ENST00000549705 PABPN1Q86U42 306 aaKnown RBP eCLIP17.33■□□□□ 0.36
CNOT2-218ENST00000549705 SP7Q8TDD2 431 aaPredicted RBP17.3■□□□□ 0.36
CNOT2-218ENST00000549705 HAX1O00165 279 aa17.25■□□□□ 0.35
CNOT2-218ENST00000549705 PRKAR2AP13861 404 aaKnown RBP17.25■□□□□ 0.35
CNOT2-218ENST00000549705 PRR29P0C7W0 189 aa17.12■□□□□ 0.33
CNOT2-218ENST00000549705 EVX2Q03828 476 aa17.09■□□□□ 0.33
CNOT2-218ENST00000549705 CHADLQ6NUI6 762 aa17.07■□□□□ 0.32
CNOT2-218ENST00000549705 SPDYE4A6NLX3 237 aa17.01■□□□□ 0.31
CNOT2-218ENST00000549705 C19orf67A6NJJ6 358 aa16.99■□□□□ 0.31
CNOT2-218ENST00000549705 STAG3Q9UJ98 1225 aa16.85■□□□□ 0.29
CNOT2-218ENST00000549705 FARP1Q9Y4F1 1045 aaPredicted RBP16.84■□□□□ 0.29
CNOT2-218ENST00000549705 CREBZFQ9NS37 354 aa16.76■□□□□ 0.27
CNOT2-218ENST00000549705 CD44P16070 742 aaKnown RBP16.71■□□□□ 0.27
CNOT2-218ENST00000549705 GABBR2O75899 941 aa16.7■□□□□ 0.26
CNOT2-218ENST00000549705 PROM2Q8N271 834 aa16.68■□□□□ 0.26
CNOT2-218ENST00000549705 MNX1P50219 401 aaPredicted RBP16.51■□□□□ 0.23
CNOT2-218ENST00000549705 ZNF579Q8NAF0 562 aaKnown RBP16.49■□□□□ 0.23
CNOT2-218ENST00000549705 ZRANB1Q9UGI0 708 aa16.48■□□□□ 0.23
CNOT2-218ENST00000549705 CLCN6P51797 869 aa16.47■□□□□ 0.23
CNOT2-218ENST00000549705 NPM1P06748 294 aaKnown RBP eCLIP16.41■□□□□ 0.22
CNOT2-218ENST00000549705 POTEIP0CG38 1075 aa16.38■□□□□ 0.21
CNOT2-218ENST00000549705 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
CNOT2-218ENST00000549705 GALR2O43603 387 aaPredicted RBP16.27■□□□□ 0.2
CNOT2-218ENST00000549705 PHF12Q96QT6 1004 aa16.27■□□□□ 0.2
CNOT2-218ENST00000549705 FKBP8Q14318 412 aa16.25■□□□□ 0.19
CNOT2-218ENST00000549705 DCBLD2Q96PD2 775 aa16.24■□□□□ 0.19
CNOT2-218ENST00000549705 LHX8Q68G74 356 aa16.21■□□□□ 0.19
CNOT2-218ENST00000549705 MIER1Q8N108 512 aa16.19■□□□□ 0.18
CNOT2-218ENST00000549705 PLEKHG5O94827 1062 aa16.16■□□□□ 0.18
CNOT2-218ENST00000549705 TSPYL2Q9H2G4 693 aaPredicted RBP16.12■□□□□ 0.17
CNOT2-218ENST00000549705 CCDC61Q9Y6R9 512 aa16.09■□□□□ 0.17
CNOT2-218ENST00000549705 PLCD3Q8N3E9 789 aa16.07■□□□□ 0.16
CNOT2-218ENST00000549705 MS4A3Q96HJ5 214 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms