RNA–Protein interactions for RNA: ENST00000549503.1

PRKD1-207, Transcript of protein kinase D1, humanhuman

TSL 3

Gene PRKD1, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-207ENST00000549503 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
PRKD1-207ENST00000549503 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
PRKD1-207ENST00000549503 SENP3Q9H4L4 574 aaPredicted RBP16.4■□□□□ 0.22
PRKD1-207ENST00000549503 PHF23Q9BUL5 403 aaPredicted RBP16.04■□□□□ 0.16
PRKD1-207ENST00000549503 FOXD1Q16676 465 aa14.99□□□□□ -0.01
PRKD1-207ENST00000549503 PLPPR3Q6T4P5 718 aa14.98□□□□□ -0.01
PRKD1-207ENST00000549503 MSH5O43196 834 aa14.22□□□□□ -0.13
PRKD1-207ENST00000549503 PIAS4Q8N2W9 510 aaPredicted RBP14.22□□□□□ -0.13
PRKD1-207ENST00000549503 ADRA2BP18089 450 aa14.15□□□□□ -0.14
PRKD1-207ENST00000549503 PPP6R1Q9UPN7 881 aa14.1□□□□□ -0.15
PRKD1-207ENST00000549503 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
PRKD1-207ENST00000549503 POTEDQ86YR6 584 aa13.1□□□□□ -0.31
PRKD1-207ENST00000549503 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
PRKD1-207ENST00000549503 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
PRKD1-207ENST00000549503 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
PRKD1-207ENST00000549503 CNKSR2Q8WXI2 1034 aa12.84□□□□□ -0.35
PRKD1-207ENST00000549503 MAPK8IP2Q13387 824 aaPredicted RBP12.83□□□□□ -0.36
PRKD1-207ENST00000549503 RNF216Q9NWF9 866 aaPredicted RBP12.64□□□□□ -0.39
PRKD1-207ENST00000549503 HOXD11P31277 338 aaPredicted RBP12.59□□□□□ -0.39
PRKD1-207ENST00000549503 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
PRKD1-207ENST00000549503 NPM3O75607 178 aaKnown RBP12.4□□□□□ -0.42
PRKD1-207ENST00000549503 KCNA4P22459 653 aa12.36□□□□□ -0.43
PRKD1-207ENST00000549503 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
PRKD1-207ENST00000549503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.07□□□□□ -0.48
PRKD1-207ENST00000549503 RNF39Q9H2S5 420 aa11.99□□□□□ -0.49
PRKD1-207ENST00000549503 C1QBPQ07021 282 aaKnown RBP11.98□□□□□ -0.49
PRKD1-207ENST00000549503 CACNB1Q02641 598 aaPredicted RBP11.91□□□□□ -0.5
PRKD1-207ENST00000549503 SLC4A1APQ9BWU0 796 aaKnown RBP11.89□□□□□ -0.51
PRKD1-207ENST00000549503 APLP2Q06481 763 aa11.86□□□□□ -0.51
PRKD1-207ENST00000549503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
PRKD1-207ENST00000549503 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
PRKD1-207ENST00000549503 SAMD1Q6SPF0 538 aaPredicted RBP11.7□□□□□ -0.54
PRKD1-207ENST00000549503 U3KPZ7 1027 aaPredicted RBP11.69□□□□□ -0.54
PRKD1-207ENST00000549503 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
PRKD1-207ENST00000549503 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
PRKD1-207ENST00000549503 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
PRKD1-207ENST00000549503 ZNF219Q9P2Y4 722 aaPredicted RBP11.55□□□□□ -0.56
PRKD1-207ENST00000549503 CAPN15O75808 1086 aa11.52□□□□□ -0.57
PRKD1-207ENST00000549503 ATXN8OSP0DMR3 200 aa11.36□□□□□ -0.59
PRKD1-207ENST00000549503 TRHP20396 242 aaPredicted RBP11.36□□□□□ -0.59
PRKD1-207ENST00000549503 SPINK5Q9NQ38 1064 aaPredicted RBP11.36□□□□□ -0.59
PRKD1-207ENST00000549503 DSG3P32926 999 aa11.29□□□□□ -0.6
PRKD1-207ENST00000549503 ZBTB22O15209 634 aa11.25□□□□□ -0.61
PRKD1-207ENST00000549503 ZBTB12Q9Y330 459 aaPredicted RBP11.22□□□□□ -0.61
PRKD1-207ENST00000549503 EHMT2Q96KQ7 1210 aa11.16□□□□□ -0.62
PRKD1-207ENST00000549503 ABCB7O75027 752 aa11.14□□□□□ -0.63
PRKD1-207ENST00000549503 POLA2Q14181 598 aa11.1□□□□□ -0.63
PRKD1-207ENST00000549503 CSRNP3Q8WYN3 585 aa11.09□□□□□ -0.63
PRKD1-207ENST00000549503 RBM42Q9BTD8 480 aaKnown RBP11.06□□□□□ -0.64
PRKD1-207ENST00000549503 ATF5Q9Y2D1 282 aaPredicted RBP11□□□□□ -0.65
PRKD1-207ENST00000549503 FBLN2P98095 1184 aa10.99□□□□□ -0.65
PRKD1-207ENST00000549503 SPDYE2BA6NHP3 402 aa10.76□□□□□ -0.69
PRKD1-207ENST00000549503 SPDYE6P0CI01 402 aa10.76□□□□□ -0.69
PRKD1-207ENST00000549503 SPDYE2Q495Y8 402 aa10.76□□□□□ -0.69
PRKD1-207ENST00000549503 AKT1S1Q96B36 256 aa10.75□□□□□ -0.69
PRKD1-207ENST00000549503 OSCARQ8IYS5 282 aa10.72□□□□□ -0.69
PRKD1-207ENST00000549503 ZNF692Q9BU19 519 aaPredicted RBP10.59□□□□□ -0.71
PRKD1-207ENST00000549503 MKRN4PQ13434 485 aaPredicted RBP10.57□□□□□ -0.72
PRKD1-207ENST00000549503 SPDYE1Q8NFV5 336 aaPredicted RBP10.52□□□□□ -0.73
PRKD1-207ENST00000549503 SSUH2Q9Y2M2 353 aa10.52□□□□□ -0.73
PRKD1-207ENST00000549503 REM2Q8IYK8 340 aaPredicted RBP10.51□□□□□ -0.73
PRKD1-207ENST00000549503 CHRDL2Q6WN34 429 aa10.49□□□□□ -0.73
PRKD1-207ENST00000549503 SPDYE4A6NLX3 237 aa10.42□□□□□ -0.74
PRKD1-207ENST00000549503 STAG3Q9UJ98 1225 aa10.42□□□□□ -0.74
PRKD1-207ENST00000549503 POTEHQ6S545 545 aa10.4□□□□□ -0.74
PRKD1-207ENST00000549503 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
PRKD1-207ENST00000549503 PITPNM1O00562 1244 aa10.37□□□□□ -0.75
PRKD1-207ENST00000549503 CLEC11AQ9Y240 323 aa10.35□□□□□ -0.75
PRKD1-207ENST00000549503 PRR29P0C7W0 189 aa10.29□□□□□ -0.76
PRKD1-207ENST00000549503 FXR2P51116 673 aaKnown RBP eCLIP10.26□□□□□ -0.77
PRKD1-207ENST00000549503 PIP4P2Q8N4L2 257 aa10.23□□□□□ -0.77
PRKD1-207ENST00000549503 PLEKHG5O94827 1062 aa10.19□□□□□ -0.78
PRKD1-207ENST00000549503 PRKAR2AP13861 404 aaKnown RBP10.16□□□□□ -0.78
PRKD1-207ENST00000549503 PROM2Q8N271 834 aa10.16□□□□□ -0.78
PRKD1-207ENST00000549503 FKBP8Q14318 412 aa10.15□□□□□ -0.78
PRKD1-207ENST00000549503 FBXO3Q9UK99 471 aa10.12□□□□□ -0.79
PRKD1-207ENST00000549503 HAX1O00165 279 aa10.05□□□□□ -0.8
PRKD1-207ENST00000549503 NPM1P06748 294 aaKnown RBP eCLIP10.05□□□□□ -0.8
PRKD1-207ENST00000549503 ZBTB47Q9UFB7 747 aaPredicted RBP10.05□□□□□ -0.8
PRKD1-207ENST00000549503 PAK3O75914 559 aaPredicted RBP10□□□□□ -0.81
PRKD1-207ENST00000549503 CLCN6P51797 869 aa10□□□□□ -0.81
PRKD1-207ENST00000549503 FARP1Q9Y4F1 1045 aaPredicted RBP9.99□□□□□ -0.81
PRKD1-207ENST00000549503 CHADLQ6NUI6 762 aa9.97□□□□□ -0.81
PRKD1-207ENST00000549503 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
PRKD1-207ENST00000549503 CREBZFQ9NS37 354 aa9.94□□□□□ -0.82
PRKD1-207ENST00000549503 MIER1Q8N108 512 aa9.93□□□□□ -0.82
PRKD1-207ENST00000549503 SP7Q8TDD2 431 aaPredicted RBP9.93□□□□□ -0.82
PRKD1-207ENST00000549503 C19orf67A6NJJ6 358 aa9.91□□□□□ -0.82
PRKD1-207ENST00000549503 CD44P16070 742 aaKnown RBP9.89□□□□□ -0.83
PRKD1-207ENST00000549503 VASPP50552 380 aaPredicted RBP9.79□□□□□ -0.84
PRKD1-207ENST00000549503 ZRANB1Q9UGI0 708 aa9.78□□□□□ -0.84
PRKD1-207ENST00000549503 MNX1P50219 401 aaPredicted RBP9.77□□□□□ -0.85
PRKD1-207ENST00000549503 ZNF579Q8NAF0 562 aaKnown RBP9.77□□□□□ -0.85
PRKD1-207ENST00000549503 KLHL34Q8N239 644 aa9.74□□□□□ -0.85
PRKD1-207ENST00000549503 FAM212AQ96EL1 285 aa9.74□□□□□ -0.85
PRKD1-207ENST00000549503 GABBR2O75899 941 aa9.66□□□□□ -0.86
PRKD1-207ENST00000549503 GSE1Q14687 1217 aa9.66□□□□□ -0.86
PRKD1-207ENST00000549503 TSPYL2Q9H2G4 693 aaPredicted RBP9.65□□□□□ -0.86
PRKD1-207ENST00000549503 EVX2Q03828 476 aa9.64□□□□□ -0.87
PRKD1-207ENST00000549503 DCBLD2Q96PD2 775 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms