RNA–Protein interactions for RNA: ENST00000549454.5

SYT1-206, Transcript of synaptotagmin 1, humanhuman

TSL 5

Gene SYT1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-206ENST00000549454 AEBP2Q6ZN18 517 aaPredicted RBP26.62■■□□□ 1.85
SYT1-206ENST00000549454 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
SYT1-206ENST00000549454 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
SYT1-206ENST00000549454 PHF23Q9BUL5 403 aaPredicted RBP22.58■■□□□ 1.21
SYT1-206ENST00000549454 FOXD1Q16676 465 aa21.04■□□□□ 0.96
SYT1-206ENST00000549454 PLPPR3Q6T4P5 718 aa20.74■□□□□ 0.91
SYT1-206ENST00000549454 ADRA2BP18089 450 aa20.03■□□□□ 0.8
SYT1-206ENST00000549454 PPP6R1Q9UPN7 881 aa20.03■□□□□ 0.8
SYT1-206ENST00000549454 PIAS4Q8N2W9 510 aaPredicted RBP19.82■□□□□ 0.76
SYT1-206ENST00000549454 MSH5O43196 834 aa19.48■□□□□ 0.71
SYT1-206ENST00000549454 POTEDQ86YR6 584 aa18.29■□□□□ 0.52
SYT1-206ENST00000549454 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
SYT1-206ENST00000549454 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
SYT1-206ENST00000549454 MAPK8IP2Q13387 824 aaPredicted RBP18.25■□□□□ 0.51
SYT1-206ENST00000549454 DMRT2Q9Y5R5 561 aa17.99■□□□□ 0.47
SYT1-206ENST00000549454 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
SYT1-206ENST00000549454 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
SYT1-206ENST00000549454 KCNA4P22459 653 aa17.55■□□□□ 0.4
SYT1-206ENST00000549454 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
SYT1-206ENST00000549454 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
SYT1-206ENST00000549454 NPM3O75607 178 aaKnown RBP17.45■□□□□ 0.38
SYT1-206ENST00000549454 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
SYT1-206ENST00000549454 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
SYT1-206ENST00000549454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.27
SYT1-206ENST00000549454 RNF39Q9H2S5 420 aa16.67■□□□□ 0.26
SYT1-206ENST00000549454 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
SYT1-206ENST00000549454 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
SYT1-206ENST00000549454 CACNB1Q02641 598 aaPredicted RBP16.5■□□□□ 0.23
SYT1-206ENST00000549454 C1QBPQ07021 282 aaKnown RBP16.42■□□□□ 0.22
SYT1-206ENST00000549454 U3KPZ7 1027 aaPredicted RBP16.42■□□□□ 0.22
SYT1-206ENST00000549454 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
SYT1-206ENST00000549454 ZBTB22O15209 634 aa16.15■□□□□ 0.18
SYT1-206ENST00000549454 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
SYT1-206ENST00000549454 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
SYT1-206ENST00000549454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
SYT1-206ENST00000549454 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
SYT1-206ENST00000549454 CAPN15O75808 1086 aa16.04■□□□□ 0.16
SYT1-206ENST00000549454 SAMD1Q6SPF0 538 aaPredicted RBP16.01■□□□□ 0.15
SYT1-206ENST00000549454 APLP2Q06481 763 aa15.97■□□□□ 0.15
SYT1-206ENST00000549454 EHMT2Q96KQ7 1210 aa15.94■□□□□ 0.14
SYT1-206ENST00000549454 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
SYT1-206ENST00000549454 ZNF219Q9P2Y4 722 aaPredicted RBP15.82■□□□□ 0.12
SYT1-206ENST00000549454 DSG3P32926 999 aa15.78■□□□□ 0.12
SYT1-206ENST00000549454 CSRNP3Q8WYN3 585 aa15.78■□□□□ 0.12
SYT1-206ENST00000549454 ABCB7O75027 752 aa15.75■□□□□ 0.11
SYT1-206ENST00000549454 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
SYT1-206ENST00000549454 ATXN8OSP0DMR3 200 aa15.59■□□□□ 0.09
SYT1-206ENST00000549454 POLA2Q14181 598 aa15.54■□□□□ 0.08
SYT1-206ENST00000549454 ZBTB12Q9Y330 459 aaPredicted RBP15.22■□□□□ 0.03
SYT1-206ENST00000549454 FBLN2P98095 1184 aa15.08■□□□□ 0
SYT1-206ENST00000549454 OSCARQ8IYS5 282 aa15.07■□□□□ 0
SYT1-206ENST00000549454 RBM42Q9BTD8 480 aaKnown RBP15.03■□□□□ -0
SYT1-206ENST00000549454 MKRN4PQ13434 485 aaPredicted RBP15.02■□□□□ -0
SYT1-206ENST00000549454 SPDYE2BA6NHP3 402 aa14.79□□□□□ -0.04
SYT1-206ENST00000549454 SPDYE6P0CI01 402 aa14.79□□□□□ -0.04
SYT1-206ENST00000549454 SPDYE2Q495Y8 402 aa14.79□□□□□ -0.04
SYT1-206ENST00000549454 AKT1S1Q96B36 256 aa14.77□□□□□ -0.05
SYT1-206ENST00000549454 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
SYT1-206ENST00000549454 REM2Q8IYK8 340 aaPredicted RBP14.66□□□□□ -0.06
SYT1-206ENST00000549454 SSUH2Q9Y2M2 353 aa14.64□□□□□ -0.07
SYT1-206ENST00000549454 SPDYE4A6NLX3 237 aa14.57□□□□□ -0.08
SYT1-206ENST00000549454 CHRDL2Q6WN34 429 aa14.55□□□□□ -0.08
SYT1-206ENST00000549454 PABPN1Q86U42 306 aaKnown RBP eCLIP14.54□□□□□ -0.08
SYT1-206ENST00000549454 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
SYT1-206ENST00000549454 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
SYT1-206ENST00000549454 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
SYT1-206ENST00000549454 POTEHQ6S545 545 aa14.42□□□□□ -0.1
SYT1-206ENST00000549454 FKBP8Q14318 412 aa14.35□□□□□ -0.11
SYT1-206ENST00000549454 PIP4P2Q8N4L2 257 aa14.31□□□□□ -0.12
SYT1-206ENST00000549454 FXR2P51116 673 aaKnown RBP eCLIP14.25□□□□□ -0.13
SYT1-206ENST00000549454 PRR29P0C7W0 189 aa14.24□□□□□ -0.13
SYT1-206ENST00000549454 PROM2Q8N271 834 aa14.2□□□□□ -0.14
SYT1-206ENST00000549454 PRKAR2AP13861 404 aaKnown RBP14.17□□□□□ -0.14
SYT1-206ENST00000549454 STAG3Q9UJ98 1225 aa14.17□□□□□ -0.14
SYT1-206ENST00000549454 CHADLQ6NUI6 762 aa14.14□□□□□ -0.15
SYT1-206ENST00000549454 CREBZFQ9NS37 354 aa13.98□□□□□ -0.17
SYT1-206ENST00000549454 HAX1O00165 279 aa13.95□□□□□ -0.18
SYT1-206ENST00000549454 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
SYT1-206ENST00000549454 MIER1Q8N108 512 aa13.85□□□□□ -0.19
SYT1-206ENST00000549454 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
SYT1-206ENST00000549454 PLCD3Q8N3E9 789 aa13.82□□□□□ -0.2
SYT1-206ENST00000549454 EVX2Q03828 476 aa13.8□□□□□ -0.2
SYT1-206ENST00000549454 C19orf67A6NJJ6 358 aa13.79□□□□□ -0.2
SYT1-206ENST00000549454 PLEKHG5O94827 1062 aa13.78□□□□□ -0.2
SYT1-206ENST00000549454 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
SYT1-206ENST00000549454 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
SYT1-206ENST00000549454 NPM1P06748 294 aaKnown RBP eCLIP13.73□□□□□ -0.21
SYT1-206ENST00000549454 SP7Q8TDD2 431 aaPredicted RBP13.73□□□□□ -0.21
SYT1-206ENST00000549454 VASPP50552 380 aaPredicted RBP13.7□□□□□ -0.22
SYT1-206ENST00000549454 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
SYT1-206ENST00000549454 PAK3O75914 559 aaPredicted RBP13.61□□□□□ -0.23
SYT1-206ENST00000549454 ZBTB47Q9UFB7 747 aaPredicted RBP13.61□□□□□ -0.23
SYT1-206ENST00000549454 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
SYT1-206ENST00000549454 TSPYL2Q9H2G4 693 aaPredicted RBP13.57□□□□□ -0.24
SYT1-206ENST00000549454 RASEFQ8IZ41 740 aa13.54□□□□□ -0.24
SYT1-206ENST00000549454 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
SYT1-206ENST00000549454 PHF12Q96QT6 1004 aa13.5□□□□□ -0.25
SYT1-206ENST00000549454 GABBR2O75899 941 aa13.49□□□□□ -0.25
SYT1-206ENST00000549454 NUBP1P53384 320 aa13.49□□□□□ -0.25
SYT1-206ENST00000549454 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 314.2 ms