RNA–Protein interactions for RNA: ENST00000549182.1

ERGIC2-207, Transcript of ERGIC and golgi 2, humanhuman

TSL 5

Gene ERGIC2, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-207ENST00000549182 AEBP2Q6ZN18 517 aaPredicted RBP37.49■■■■□ 3.59
ERGIC2-207ENST00000549182 CHIC1Q5VXU3 224 aa35.34■■■■□ 3.25
ERGIC2-207ENST00000549182 SENP3Q9H4L4 574 aaPredicted RBP31.91■■■□□ 2.7
ERGIC2-207ENST00000549182 PHF23Q9BUL5 403 aaPredicted RBP31.54■■■□□ 2.64
ERGIC2-207ENST00000549182 FOXD1Q16676 465 aa29.85■■■□□ 2.37
ERGIC2-207ENST00000549182 POTEDQ86YR6 584 aa29.1■■■□□ 2.25
ERGIC2-207ENST00000549182 PLPPR3Q6T4P5 718 aa28.11■■■□□ 2.09
ERGIC2-207ENST00000549182 MSH5O43196 834 aa27.93■■■□□ 2.06
ERGIC2-207ENST00000549182 PPP6R1Q9UPN7 881 aa27.79■■■□□ 2.04
ERGIC2-207ENST00000549182 PIAS4Q8N2W9 510 aaPredicted RBP27.77■■■□□ 2.04
ERGIC2-207ENST00000549182 ADRA2BP18089 450 aa27.66■■■□□ 2.02
ERGIC2-207ENST00000549182 MAPK8IP2Q13387 824 aaPredicted RBP25.5■■□□□ 1.67
ERGIC2-207ENST00000549182 DMRT2Q9Y5R5 561 aa25.31■■□□□ 1.64
ERGIC2-207ENST00000549182 SCAF1Q9H7N4 1312 aaKnown RBP25.21■■□□□ 1.63
ERGIC2-207ENST00000549182 PPP4R3CPQ6ZMV5 832 aa24.64■■□□□ 1.54
ERGIC2-207ENST00000549182 CACNB1Q02641 598 aaPredicted RBP24.4■■□□□ 1.5
ERGIC2-207ENST00000549182 HOXD11P31277 338 aaPredicted RBP24.3■■□□□ 1.48
ERGIC2-207ENST00000549182 DCAF8L1A6NGE4 600 aa24.25■■□□□ 1.47
ERGIC2-207ENST00000549182 CNKSR2Q8WXI2 1034 aa24.2■■□□□ 1.46
ERGIC2-207ENST00000549182 RNF216Q9NWF9 866 aaPredicted RBP24.04■■□□□ 1.44
ERGIC2-207ENST00000549182 RNF39Q9H2S5 420 aa23.86■■□□□ 1.41
ERGIC2-207ENST00000549182 NCBP3Q53F19 620 aaKnown RBP23.56■■□□□ 1.36
ERGIC2-207ENST00000549182 C1QBPQ07021 282 aaKnown RBP23.47■■□□□ 1.35
ERGIC2-207ENST00000549182 DNAJC5BQ9UF47 199 aa23.47■■□□□ 1.35
ERGIC2-207ENST00000549182 NPM3O75607 178 aaKnown RBP23.29■■□□□ 1.32
ERGIC2-207ENST00000549182 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.12■■□□□ 1.29
ERGIC2-207ENST00000549182 KCNA4P22459 653 aa22.67■■□□□ 1.22
ERGIC2-207ENST00000549182 U3KPZ7 1027 aaPredicted RBP22.65■■□□□ 1.22
ERGIC2-207ENST00000549182 POTEHQ6S545 545 aa22.53■■□□□ 1.2
ERGIC2-207ENST00000549182 SPINK5Q9NQ38 1064 aaPredicted RBP22.41■■□□□ 1.18
ERGIC2-207ENST00000549182 SLC4A2P04920 1241 aa22.34■■□□□ 1.17
ERGIC2-207ENST00000549182 CAPN15O75808 1086 aa22.33■■□□□ 1.17
ERGIC2-207ENST00000549182 DSG3P32926 999 aa22.29■■□□□ 1.16
ERGIC2-207ENST00000549182 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
ERGIC2-207ENST00000549182 APLP2Q06481 763 aa21.88■■□□□ 1.09
ERGIC2-207ENST00000549182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.85■■□□□ 1.09
ERGIC2-207ENST00000549182 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
ERGIC2-207ENST00000549182 ZNF219Q9P2Y4 722 aaPredicted RBP21.83■■□□□ 1.09
ERGIC2-207ENST00000549182 ABCB7O75027 752 aa21.81■■□□□ 1.08
ERGIC2-207ENST00000549182 SAMD1Q6SPF0 538 aaPredicted RBP21.74■■□□□ 1.07
ERGIC2-207ENST00000549182 MYCNP04198 464 aaPredicted RBP21.49■■□□□ 1.03
ERGIC2-207ENST00000549182 SLC4A1APQ9BWU0 796 aaKnown RBP21.32■■□□□ 1
ERGIC2-207ENST00000549182 POLA2Q14181 598 aa21.31■■□□□ 1
ERGIC2-207ENST00000549182 RBM42Q9BTD8 480 aaKnown RBP21.18■□□□□ 0.98
ERGIC2-207ENST00000549182 FOXD4L1Q9NU39 408 aa21.18■□□□□ 0.98
ERGIC2-207ENST00000549182 ATF5Q9Y2D1 282 aaPredicted RBP21.12■□□□□ 0.97
ERGIC2-207ENST00000549182 ZBTB22O15209 634 aa20.86■□□□□ 0.93
ERGIC2-207ENST00000549182 CHRDL2Q6WN34 429 aa20.86■□□□□ 0.93
ERGIC2-207ENST00000549182 ZBTB12Q9Y330 459 aaPredicted RBP20.77■□□□□ 0.92
ERGIC2-207ENST00000549182 AKT1S1Q96B36 256 aa20.7■□□□□ 0.9
ERGIC2-207ENST00000549182 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
ERGIC2-207ENST00000549182 ATXN8OSP0DMR3 200 aa20.54■□□□□ 0.88
ERGIC2-207ENST00000549182 REM2Q8IYK8 340 aaPredicted RBP20.54■□□□□ 0.88
ERGIC2-207ENST00000549182 SP7Q8TDD2 431 aaPredicted RBP20.52■□□□□ 0.88
ERGIC2-207ENST00000549182 PIP4P2Q8N4L2 257 aa20.34■□□□□ 0.85
ERGIC2-207ENST00000549182 PITPNM1O00562 1244 aa20.3■□□□□ 0.84
ERGIC2-207ENST00000549182 FXR2P51116 673 aaKnown RBP eCLIP20.19■□□□□ 0.82
ERGIC2-207ENST00000549182 FBLN2P98095 1184 aa20.19■□□□□ 0.82
ERGIC2-207ENST00000549182 SPDYE2BA6NHP3 402 aa20.16■□□□□ 0.82
ERGIC2-207ENST00000549182 SPDYE6P0CI01 402 aa20.16■□□□□ 0.82
ERGIC2-207ENST00000549182 SPDYE2Q495Y8 402 aa20.16■□□□□ 0.82
ERGIC2-207ENST00000549182 MKRN4PQ13434 485 aaPredicted RBP20.12■□□□□ 0.81
ERGIC2-207ENST00000549182 HAX1O00165 279 aa20.01■□□□□ 0.79
ERGIC2-207ENST00000549182 ZNF692Q9BU19 519 aaPredicted RBP19.91■□□□□ 0.78
ERGIC2-207ENST00000549182 SSUH2Q9Y2M2 353 aa19.89■□□□□ 0.77
ERGIC2-207ENST00000549182 CLEC11AQ9Y240 323 aa19.86■□□□□ 0.77
ERGIC2-207ENST00000549182 SPDYE1Q8NFV5 336 aaPredicted RBP19.85■□□□□ 0.77
ERGIC2-207ENST00000549182 EVX2Q03828 476 aa19.84■□□□□ 0.77
ERGIC2-207ENST00000549182 PRKAR2AP13861 404 aaKnown RBP19.78■□□□□ 0.76
ERGIC2-207ENST00000549182 CSRNP3Q8WYN3 585 aa19.72■□□□□ 0.75
ERGIC2-207ENST00000549182 PABPN1Q86U42 306 aaKnown RBP eCLIP19.61■□□□□ 0.73
ERGIC2-207ENST00000549182 C19orf67A6NJJ6 358 aa19.54■□□□□ 0.72
ERGIC2-207ENST00000549182 CHADLQ6NUI6 762 aa19.54■□□□□ 0.72
ERGIC2-207ENST00000549182 PRR29P0C7W0 189 aa19.5■□□□□ 0.71
ERGIC2-207ENST00000549182 GABBR2O75899 941 aa19.33■□□□□ 0.68
ERGIC2-207ENST00000549182 EHMT2Q96KQ7 1210 aa19.27■□□□□ 0.68
ERGIC2-207ENST00000549182 LHX8Q68G74 356 aa19.22■□□□□ 0.67
ERGIC2-207ENST00000549182 FARP1Q9Y4F1 1045 aaPredicted RBP19.2■□□□□ 0.66
ERGIC2-207ENST00000549182 CD44P16070 742 aaKnown RBP19.13■□□□□ 0.65
ERGIC2-207ENST00000549182 SPDYE4A6NLX3 237 aa19.01■□□□□ 0.63
ERGIC2-207ENST00000549182 PLSCR2Q9NRY7 297 aa19.01■□□□□ 0.63
ERGIC2-207ENST00000549182 CREBZFQ9NS37 354 aa19■□□□□ 0.63
ERGIC2-207ENST00000549182 STAG3Q9UJ98 1225 aa18.98■□□□□ 0.63
ERGIC2-207ENST00000549182 POTEIP0CG38 1075 aa18.95■□□□□ 0.62
ERGIC2-207ENST00000549182 CLCN6P51797 869 aa18.87■□□□□ 0.61
ERGIC2-207ENST00000549182 ZRANB1Q9UGI0 708 aa18.84■□□□□ 0.61
ERGIC2-207ENST00000549182 ZNF579Q8NAF0 562 aaKnown RBP18.81■□□□□ 0.6
ERGIC2-207ENST00000549182 DCBLD2Q96PD2 775 aa18.7■□□□□ 0.58
ERGIC2-207ENST00000549182 MNX1P50219 401 aaPredicted RBP18.66■□□□□ 0.58
ERGIC2-207ENST00000549182 GALR2O43603 387 aaPredicted RBP18.64■□□□□ 0.57
ERGIC2-207ENST00000549182 NPM1P06748 294 aaKnown RBP eCLIP18.57■□□□□ 0.56
ERGIC2-207ENST00000549182 PAK3O75914 559 aaPredicted RBP18.56■□□□□ 0.56
ERGIC2-207ENST00000549182 PHF12Q96QT6 1004 aa18.56■□□□□ 0.56
ERGIC2-207ENST00000549182 PROM2Q8N271 834 aa18.53■□□□□ 0.56
ERGIC2-207ENST00000549182 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
ERGIC2-207ENST00000549182 POTEB2H3BUK9 544 aa18.33■□□□□ 0.52
ERGIC2-207ENST00000549182 MS4A3Q96HJ5 214 aa18.31■□□□□ 0.52
ERGIC2-207ENST00000549182 TSPYL2Q9H2G4 693 aaPredicted RBP18.28■□□□□ 0.52
ERGIC2-207ENST00000549182 OTUD5Q96G74 571 aa18.27■□□□□ 0.52
ERGIC2-207ENST00000549182 CCDC61Q9Y6R9 512 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 225.6 ms