RNA–Protein interactions for RNA: ENST00000548886.1

RMST-205, rhabdomyosarcoma 2 associated transcript, humanhuman

TSL 1 (best)

Gene RMST, Length 1,047 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMST-205ENST00000548886 AEBP2Q6ZN18 517 aaPredicted RBP25.38■■□□□ 1.65
RMST-205ENST00000548886 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.49
RMST-205ENST00000548886 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
RMST-205ENST00000548886 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.01
RMST-205ENST00000548886 FOXD1Q16676 465 aa20.11■□□□□ 0.81
RMST-205ENST00000548886 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.73
RMST-205ENST00000548886 PPP6R1Q9UPN7 881 aa19.02■□□□□ 0.64
RMST-205ENST00000548886 ADRA2BP18089 450 aa19.01■□□□□ 0.63
RMST-205ENST00000548886 PIAS4Q8N2W9 510 aaPredicted RBP18.91■□□□□ 0.62
RMST-205ENST00000548886 MSH5O43196 834 aa18.72■□□□□ 0.59
RMST-205ENST00000548886 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
RMST-205ENST00000548886 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
RMST-205ENST00000548886 MAPK8IP2Q13387 824 aaPredicted RBP17.37■□□□□ 0.37
RMST-205ENST00000548886 PPP4R3CPQ6ZMV5 832 aa17.27■□□□□ 0.36
RMST-205ENST00000548886 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
RMST-205ENST00000548886 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
RMST-205ENST00000548886 NCBP3Q53F19 620 aaKnown RBP16.7■□□□□ 0.26
RMST-205ENST00000548886 HOXD11P31277 338 aaPredicted RBP16.64■□□□□ 0.25
RMST-205ENST00000548886 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
RMST-205ENST00000548886 DCAF8L1A6NGE4 600 aa16.58■□□□□ 0.24
RMST-205ENST00000548886 KCNA4P22459 653 aa16.57■□□□□ 0.24
RMST-205ENST00000548886 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
RMST-205ENST00000548886 RNF39Q9H2S5 420 aa15.98■□□□□ 0.15
RMST-205ENST00000548886 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
RMST-205ENST00000548886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.14
RMST-205ENST00000548886 CACNB1Q02641 598 aaPredicted RBP15.94■□□□□ 0.14
RMST-205ENST00000548886 C1QBPQ07021 282 aaKnown RBP15.76■□□□□ 0.11
RMST-205ENST00000548886 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
RMST-205ENST00000548886 SLC4A2P04920 1241 aa15.6■□□□□ 0.09
RMST-205ENST00000548886 U3KPZ7 1027 aaPredicted RBP15.59■□□□□ 0.09
RMST-205ENST00000548886 CAPN15O75808 1086 aa15.31■□□□□ 0.04
RMST-205ENST00000548886 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
RMST-205ENST00000548886 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.04
RMST-205ENST00000548886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
RMST-205ENST00000548886 ZBTB22O15209 634 aa15.26■□□□□ 0.03
RMST-205ENST00000548886 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
RMST-205ENST00000548886 APLP2Q06481 763 aa15.23■□□□□ 0.03
RMST-205ENST00000548886 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
RMST-205ENST00000548886 MYCNP04198 464 aaPredicted RBP15.21■□□□□ 0.03
RMST-205ENST00000548886 SAMD1Q6SPF0 538 aaPredicted RBP15.19■□□□□ 0.02
RMST-205ENST00000548886 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
RMST-205ENST00000548886 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0
RMST-205ENST00000548886 ZNF219Q9P2Y4 722 aaPredicted RBP15.08■□□□□ 0
RMST-205ENST00000548886 DSG3P32926 999 aa15.07■□□□□ 0
RMST-205ENST00000548886 ABCB7O75027 752 aa14.99□□□□□ -0.01
RMST-205ENST00000548886 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.04
RMST-205ENST00000548886 POLA2Q14181 598 aa14.75□□□□□ -0.05
RMST-205ENST00000548886 ATXN8OSP0DMR3 200 aa14.67□□□□□ -0.06
RMST-205ENST00000548886 ZBTB12Q9Y330 459 aaPredicted RBP14.47□□□□□ -0.09
RMST-205ENST00000548886 RBM42Q9BTD8 480 aaKnown RBP14.41□□□□□ -0.1
RMST-205ENST00000548886 OSCARQ8IYS5 282 aa14.29□□□□□ -0.12
RMST-205ENST00000548886 FBLN2P98095 1184 aa14.27□□□□□ -0.13
RMST-205ENST00000548886 MKRN4PQ13434 485 aaPredicted RBP14.14□□□□□ -0.15
RMST-205ENST00000548886 AKT1S1Q96B36 256 aa14.12□□□□□ -0.15
RMST-205ENST00000548886 SPDYE2BA6NHP3 402 aa14.04□□□□□ -0.16
RMST-205ENST00000548886 SPDYE6P0CI01 402 aa14.04□□□□□ -0.16
RMST-205ENST00000548886 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
RMST-205ENST00000548886 POTEHQ6S545 545 aa14□□□□□ -0.17
RMST-205ENST00000548886 REM2Q8IYK8 340 aaPredicted RBP13.98□□□□□ -0.17
RMST-205ENST00000548886 CHRDL2Q6WN34 429 aa13.97□□□□□ -0.17
RMST-205ENST00000548886 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.17
RMST-205ENST00000548886 SSUH2Q9Y2M2 353 aa13.86□□□□□ -0.19
RMST-205ENST00000548886 PITPNM1O00562 1244 aa13.85□□□□□ -0.19
RMST-205ENST00000548886 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
RMST-205ENST00000548886 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
RMST-205ENST00000548886 SPDYE1Q8NFV5 336 aaPredicted RBP13.74□□□□□ -0.21
RMST-205ENST00000548886 PIP4P2Q8N4L2 257 aa13.7□□□□□ -0.22
RMST-205ENST00000548886 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
RMST-205ENST00000548886 FXR2P51116 673 aaKnown RBP eCLIP13.64□□□□□ -0.23
RMST-205ENST00000548886 FKBP8Q14318 412 aa13.64□□□□□ -0.23
RMST-205ENST00000548886 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
RMST-205ENST00000548886 PRKAR2AP13861 404 aaKnown RBP13.51□□□□□ -0.25
RMST-205ENST00000548886 CHADLQ6NUI6 762 aa13.44□□□□□ -0.26
RMST-205ENST00000548886 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
RMST-205ENST00000548886 HAX1O00165 279 aa13.41□□□□□ -0.26
RMST-205ENST00000548886 PROM2Q8N271 834 aa13.4□□□□□ -0.26
RMST-205ENST00000548886 SP7Q8TDD2 431 aaPredicted RBP13.26□□□□□ -0.29
RMST-205ENST00000548886 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
RMST-205ENST00000548886 FARP1Q9Y4F1 1045 aaPredicted RBP13.23□□□□□ -0.29
RMST-205ENST00000548886 EVX2Q03828 476 aa13.21□□□□□ -0.29
RMST-205ENST00000548886 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
RMST-205ENST00000548886 CD44P16070 742 aaKnown RBP13.11□□□□□ -0.31
RMST-205ENST00000548886 FBXO3Q9UK99 471 aa13.1□□□□□ -0.31
RMST-205ENST00000548886 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
RMST-205ENST00000548886 MIER1Q8N108 512 aa13.03□□□□□ -0.32
RMST-205ENST00000548886 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
RMST-205ENST00000548886 MNX1P50219 401 aaPredicted RBP13□□□□□ -0.33
RMST-205ENST00000548886 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
RMST-205ENST00000548886 VASPP50552 380 aaPredicted RBP12.98□□□□□ -0.33
RMST-205ENST00000548886 PLCD3Q8N3E9 789 aa12.98□□□□□ -0.33
RMST-205ENST00000548886 GABBR2O75899 941 aa12.95□□□□□ -0.34
RMST-205ENST00000548886 PAK3O75914 559 aaPredicted RBP12.95□□□□□ -0.34
RMST-205ENST00000548886 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
RMST-205ENST00000548886 TSPYL2Q9H2G4 693 aaPredicted RBP12.83□□□□□ -0.36
RMST-205ENST00000548886 ZBTB47Q9UFB7 747 aaPredicted RBP12.83□□□□□ -0.36
RMST-205ENST00000548886 IFNLR1Q8IU57 520 aaPredicted RBP12.82□□□□□ -0.36
RMST-205ENST00000548886 PHF12Q96QT6 1004 aa12.81□□□□□ -0.36
RMST-205ENST00000548886 CLCN6P51797 869 aa12.8□□□□□ -0.36
RMST-205ENST00000548886 KLHL34Q8N239 644 aa12.8□□□□□ -0.36
RMST-205ENST00000548886 RASEFQ8IZ41 740 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms