RNA–Protein interactions for RNA: ENST00000548670.1

PPFIA2-212, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-212ENST00000548670 AEBP2Q6ZN18 517 aaPredicted RBP24.7■■□□□ 1.54
PPFIA2-212ENST00000548670 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
PPFIA2-212ENST00000548670 SENP3Q9H4L4 574 aaPredicted RBP21.15■□□□□ 0.98
PPFIA2-212ENST00000548670 PHF23Q9BUL5 403 aaPredicted RBP20.87■□□□□ 0.93
PPFIA2-212ENST00000548670 FOXD1Q16676 465 aa19.66■□□□□ 0.74
PPFIA2-212ENST00000548670 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
PPFIA2-212ENST00000548670 MSH5O43196 834 aa18.44■□□□□ 0.54
PPFIA2-212ENST00000548670 PIAS4Q8N2W9 510 aaPredicted RBP18.4■□□□□ 0.54
PPFIA2-212ENST00000548670 PPP6R1Q9UPN7 881 aa18.4■□□□□ 0.54
PPFIA2-212ENST00000548670 ADRA2BP18089 450 aa18.36■□□□□ 0.53
PPFIA2-212ENST00000548670 POTEDQ86YR6 584 aa17.85■□□□□ 0.45
PPFIA2-212ENST00000548670 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
PPFIA2-212ENST00000548670 MAPK8IP2Q13387 824 aaPredicted RBP16.84■□□□□ 0.29
PPFIA2-212ENST00000548670 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
PPFIA2-212ENST00000548670 PPP4R3CPQ6ZMV5 832 aa16.54■□□□□ 0.24
PPFIA2-212ENST00000548670 CNKSR2Q8WXI2 1034 aa16.24■□□□□ 0.19
PPFIA2-212ENST00000548670 HOXD11P31277 338 aaPredicted RBP16.17■□□□□ 0.18
PPFIA2-212ENST00000548670 DCAF8L1A6NGE4 600 aa16.1■□□□□ 0.17
PPFIA2-212ENST00000548670 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
PPFIA2-212ENST00000548670 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
PPFIA2-212ENST00000548670 CACNB1Q02641 598 aaPredicted RBP15.79■□□□□ 0.12
PPFIA2-212ENST00000548670 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
PPFIA2-212ENST00000548670 NPM3O75607 178 aaKnown RBP15.67■□□□□ 0.1
PPFIA2-212ENST00000548670 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
PPFIA2-212ENST00000548670 C1QBPQ07021 282 aaKnown RBP15.52■□□□□ 0.08
PPFIA2-212ENST00000548670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.44■□□□□ 0.06
PPFIA2-212ENST00000548670 KCNA4P22459 653 aa15.4■□□□□ 0.06
PPFIA2-212ENST00000548670 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
PPFIA2-212ENST00000548670 SLC4A2P04920 1241 aa14.94□□□□□ -0.02
PPFIA2-212ENST00000548670 CAPN15O75808 1086 aa14.85□□□□□ -0.03
PPFIA2-212ENST00000548670 SPINK5Q9NQ38 1064 aaPredicted RBP14.82□□□□□ -0.04
PPFIA2-212ENST00000548670 APLP2Q06481 763 aa14.77□□□□□ -0.05
PPFIA2-212ENST00000548670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
PPFIA2-212ENST00000548670 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
PPFIA2-212ENST00000548670 DSG3P32926 999 aa14.72□□□□□ -0.05
PPFIA2-212ENST00000548670 SAMD1Q6SPF0 538 aaPredicted RBP14.65□□□□□ -0.06
PPFIA2-212ENST00000548670 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
PPFIA2-212ENST00000548670 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
PPFIA2-212ENST00000548670 SLC4A1APQ9BWU0 796 aaKnown RBP14.59□□□□□ -0.07
PPFIA2-212ENST00000548670 MYCNP04198 464 aaPredicted RBP14.52□□□□□ -0.09
PPFIA2-212ENST00000548670 ABCB7O75027 752 aa14.46□□□□□ -0.09
PPFIA2-212ENST00000548670 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
PPFIA2-212ENST00000548670 POLA2Q14181 598 aa14.24□□□□□ -0.13
PPFIA2-212ENST00000548670 ATF5Q9Y2D1 282 aaPredicted RBP14.12□□□□□ -0.15
PPFIA2-212ENST00000548670 ZBTB22O15209 634 aa14.11□□□□□ -0.15
PPFIA2-212ENST00000548670 RBM42Q9BTD8 480 aaKnown RBP14.11□□□□□ -0.15
PPFIA2-212ENST00000548670 POTEHQ6S545 545 aa14.02□□□□□ -0.17
PPFIA2-212ENST00000548670 ZBTB12Q9Y330 459 aaPredicted RBP13.99□□□□□ -0.17
PPFIA2-212ENST00000548670 ATXN8OSP0DMR3 200 aa13.98□□□□□ -0.17
PPFIA2-212ENST00000548670 AKT1S1Q96B36 256 aa13.77□□□□□ -0.21
PPFIA2-212ENST00000548670 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
PPFIA2-212ENST00000548670 CHRDL2Q6WN34 429 aa13.73□□□□□ -0.21
PPFIA2-212ENST00000548670 FBLN2P98095 1184 aa13.67□□□□□ -0.22
PPFIA2-212ENST00000548670 REM2Q8IYK8 340 aaPredicted RBP13.62□□□□□ -0.23
PPFIA2-212ENST00000548670 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
PPFIA2-212ENST00000548670 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
PPFIA2-212ENST00000548670 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
PPFIA2-212ENST00000548670 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
PPFIA2-212ENST00000548670 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
PPFIA2-212ENST00000548670 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
PPFIA2-212ENST00000548670 EHMT2Q96KQ7 1210 aa13.41□□□□□ -0.26
PPFIA2-212ENST00000548670 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
PPFIA2-212ENST00000548670 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
PPFIA2-212ENST00000548670 FXR2P51116 673 aaKnown RBP eCLIP13.34□□□□□ -0.27
PPFIA2-212ENST00000548670 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
PPFIA2-212ENST00000548670 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
PPFIA2-212ENST00000548670 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
PPFIA2-212ENST00000548670 HAX1O00165 279 aa13.19□□□□□ -0.3
PPFIA2-212ENST00000548670 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
PPFIA2-212ENST00000548670 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
PPFIA2-212ENST00000548670 PRKAR2AP13861 404 aaKnown RBP13.13□□□□□ -0.31
PPFIA2-212ENST00000548670 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
PPFIA2-212ENST00000548670 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
PPFIA2-212ENST00000548670 EVX2Q03828 476 aa12.95□□□□□ -0.34
PPFIA2-212ENST00000548670 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
PPFIA2-212ENST00000548670 C19orf67A6NJJ6 358 aa12.91□□□□□ -0.34
PPFIA2-212ENST00000548670 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
PPFIA2-212ENST00000548670 FARP1Q9Y4F1 1045 aaPredicted RBP12.81□□□□□ -0.36
PPFIA2-212ENST00000548670 CD44P16070 742 aaKnown RBP12.72□□□□□ -0.37
PPFIA2-212ENST00000548670 GABBR2O75899 941 aa12.71□□□□□ -0.37
PPFIA2-212ENST00000548670 CREBZFQ9NS37 354 aa12.7□□□□□ -0.38
PPFIA2-212ENST00000548670 CLCN6P51797 869 aa12.62□□□□□ -0.39
PPFIA2-212ENST00000548670 PROM2Q8N271 834 aa12.58□□□□□ -0.4
PPFIA2-212ENST00000548670 ZRANB1Q9UGI0 708 aa12.56□□□□□ -0.4
PPFIA2-212ENST00000548670 NPM1P06748 294 aaKnown RBP eCLIP12.55□□□□□ -0.4
PPFIA2-212ENST00000548670 PAK3O75914 559 aaPredicted RBP12.51□□□□□ -0.41
PPFIA2-212ENST00000548670 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
PPFIA2-212ENST00000548670 MNX1P50219 401 aaPredicted RBP12.47□□□□□ -0.41
PPFIA2-212ENST00000548670 DCBLD2Q96PD2 775 aa12.42□□□□□ -0.42
PPFIA2-212ENST00000548670 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
PPFIA2-212ENST00000548670 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
PPFIA2-212ENST00000548670 LHX8Q68G74 356 aa12.37□□□□□ -0.43
PPFIA2-212ENST00000548670 MIER1Q8N108 512 aa12.37□□□□□ -0.43
PPFIA2-212ENST00000548670 GALR2O43603 387 aaPredicted RBP12.34□□□□□ -0.43
PPFIA2-212ENST00000548670 PHF12Q96QT6 1004 aa12.34□□□□□ -0.43
PPFIA2-212ENST00000548670 FKBP8Q14318 412 aa12.32□□□□□ -0.44
PPFIA2-212ENST00000548670 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
PPFIA2-212ENST00000548670 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.45
PPFIA2-212ENST00000548670 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
PPFIA2-212ENST00000548670 CCDC61Q9Y6R9 512 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms