RNA–Protein interactions for RNA: ENST00000548453.5

PPFIA2-210, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-210ENST00000548453 AEBP2Q6ZN18 517 aaPredicted RBP23.88■■□□□ 1.41
PPFIA2-210ENST00000548453 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
PPFIA2-210ENST00000548453 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
PPFIA2-210ENST00000548453 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
PPFIA2-210ENST00000548453 PLPPR3Q6T4P5 718 aa19.07■□□□□ 0.64
PPFIA2-210ENST00000548453 FOXD1Q16676 465 aa18.72■□□□□ 0.59
PPFIA2-210ENST00000548453 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
PPFIA2-210ENST00000548453 ADRA2BP18089 450 aa18.19■□□□□ 0.5
PPFIA2-210ENST00000548453 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
PPFIA2-210ENST00000548453 MSH5O43196 834 aa17.06■□□□□ 0.32
PPFIA2-210ENST00000548453 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
PPFIA2-210ENST00000548453 KCNA4P22459 653 aa16.77■□□□□ 0.28
PPFIA2-210ENST00000548453 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
PPFIA2-210ENST00000548453 SCAF1Q9H7N4 1312 aaKnown RBP16.46■□□□□ 0.23
PPFIA2-210ENST00000548453 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
PPFIA2-210ENST00000548453 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
PPFIA2-210ENST00000548453 NPM3O75607 178 aaKnown RBP16.28■□□□□ 0.2
PPFIA2-210ENST00000548453 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
PPFIA2-210ENST00000548453 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
PPFIA2-210ENST00000548453 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
PPFIA2-210ENST00000548453 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
PPFIA2-210ENST00000548453 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
PPFIA2-210ENST00000548453 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
PPFIA2-210ENST00000548453 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
PPFIA2-210ENST00000548453 ZBTB22O15209 634 aa15.49■□□□□ 0.07
PPFIA2-210ENST00000548453 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
PPFIA2-210ENST00000548453 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
PPFIA2-210ENST00000548453 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
PPFIA2-210ENST00000548453 POTEDQ86YR6 584 aa15.27■□□□□ 0.04
PPFIA2-210ENST00000548453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.07■□□□□ 0
PPFIA2-210ENST00000548453 MYCNP04198 464 aaPredicted RBP14.97□□□□□ -0.01
PPFIA2-210ENST00000548453 U3KPZ7 1027 aaPredicted RBP14.93□□□□□ -0.02
PPFIA2-210ENST00000548453 RNF39Q9H2S5 420 aa14.71□□□□□ -0.05
PPFIA2-210ENST00000548453 ATXN8OSP0DMR3 200 aa14.7□□□□□ -0.06
PPFIA2-210ENST00000548453 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
PPFIA2-210ENST00000548453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
PPFIA2-210ENST00000548453 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
PPFIA2-210ENST00000548453 SAMD1Q6SPF0 538 aaPredicted RBP14.65□□□□□ -0.06
PPFIA2-210ENST00000548453 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
PPFIA2-210ENST00000548453 SPINK5Q9NQ38 1064 aaPredicted RBP14.48□□□□□ -0.09
PPFIA2-210ENST00000548453 APLP2Q06481 763 aa14.41□□□□□ -0.1
PPFIA2-210ENST00000548453 ZNF219Q9P2Y4 722 aaPredicted RBP14.33□□□□□ -0.12
PPFIA2-210ENST00000548453 CAPN15O75808 1086 aa14.32□□□□□ -0.12
PPFIA2-210ENST00000548453 TRHP20396 242 aaPredicted RBP14.32□□□□□ -0.12
PPFIA2-210ENST00000548453 POLA2Q14181 598 aa14.15□□□□□ -0.14
PPFIA2-210ENST00000548453 CACNB1Q02641 598 aaPredicted RBP14.13□□□□□ -0.15
PPFIA2-210ENST00000548453 ABCB7O75027 752 aa14.12□□□□□ -0.15
PPFIA2-210ENST00000548453 DSG3P32926 999 aa14.08□□□□□ -0.16
PPFIA2-210ENST00000548453 MKRN4PQ13434 485 aaPredicted RBP14.04□□□□□ -0.16
PPFIA2-210ENST00000548453 FKBP8Q14318 412 aa13.97□□□□□ -0.17
PPFIA2-210ENST00000548453 FBLN2P98095 1184 aa13.88□□□□□ -0.19
PPFIA2-210ENST00000548453 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
PPFIA2-210ENST00000548453 SPDYE4A6NLX3 237 aa13.73□□□□□ -0.21
PPFIA2-210ENST00000548453 OSCARQ8IYS5 282 aa13.68□□□□□ -0.22
PPFIA2-210ENST00000548453 PROM2Q8N271 834 aa13.58□□□□□ -0.24
PPFIA2-210ENST00000548453 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
PPFIA2-210ENST00000548453 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
PPFIA2-210ENST00000548453 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
PPFIA2-210ENST00000548453 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.25
PPFIA2-210ENST00000548453 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
PPFIA2-210ENST00000548453 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
PPFIA2-210ENST00000548453 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
PPFIA2-210ENST00000548453 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
PPFIA2-210ENST00000548453 AKT1S1Q96B36 256 aa13.23□□□□□ -0.29
PPFIA2-210ENST00000548453 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
PPFIA2-210ENST00000548453 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
PPFIA2-210ENST00000548453 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
PPFIA2-210ENST00000548453 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
PPFIA2-210ENST00000548453 IFNLR1Q8IU57 520 aaPredicted RBP13.1□□□□□ -0.31
PPFIA2-210ENST00000548453 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
PPFIA2-210ENST00000548453 AMER1Q5JTC6 1135 aaPredicted RBP13.03□□□□□ -0.32
PPFIA2-210ENST00000548453 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
PPFIA2-210ENST00000548453 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
PPFIA2-210ENST00000548453 MIER1Q8N108 512 aa12.98□□□□□ -0.33
PPFIA2-210ENST00000548453 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
PPFIA2-210ENST00000548453 PRR29P0C7W0 189 aa12.92□□□□□ -0.34
PPFIA2-210ENST00000548453 KLHL34Q8N239 644 aa12.89□□□□□ -0.35
PPFIA2-210ENST00000548453 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
PPFIA2-210ENST00000548453 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
PPFIA2-210ENST00000548453 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
PPFIA2-210ENST00000548453 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
PPFIA2-210ENST00000548453 CHADLQ6NUI6 762 aa12.76□□□□□ -0.37
PPFIA2-210ENST00000548453 PKD2Q13563 968 aa12.75□□□□□ -0.37
PPFIA2-210ENST00000548453 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
PPFIA2-210ENST00000548453 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
PPFIA2-210ENST00000548453 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
PPFIA2-210ENST00000548453 NUBP1P53384 320 aa12.69□□□□□ -0.38
PPFIA2-210ENST00000548453 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
PPFIA2-210ENST00000548453 PIP4P2Q8N4L2 257 aa12.66□□□□□ -0.38
PPFIA2-210ENST00000548453 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
PPFIA2-210ENST00000548453 RASEFQ8IZ41 740 aa12.6□□□□□ -0.39
PPFIA2-210ENST00000548453 CIZ1Q9ULV3 898 aaPredicted RBP12.6□□□□□ -0.39
PPFIA2-210ENST00000548453 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
PPFIA2-210ENST00000548453 NPM1P06748 294 aaKnown RBP eCLIP12.54□□□□□ -0.4
PPFIA2-210ENST00000548453 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
PPFIA2-210ENST00000548453 GSE1Q14687 1217 aa12.5□□□□□ -0.41
PPFIA2-210ENST00000548453 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
PPFIA2-210ENST00000548453 RGL2O15211 777 aa12.49□□□□□ -0.41
PPFIA2-210ENST00000548453 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
PPFIA2-210ENST00000548453 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms